| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,673,623 | G→C | 7.3% | intergenic (+69/‑101) | PP_4978 → / → PP_4979 | hypothetical protein/substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,673,623 | 0 | G | C | 7.3% | 623.6 / 7.9 | 202 | intergenic (+69/‑101) | PP_4978/PP_4979 | hypothetical protein/substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (80/104); new base C (13/5); total (93/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.52e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 205 total aligned reads displayed.
CATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGA > NC_002947/5673477‑5673772 | cATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCACGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGAGGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGCAGAGAGCAACCCGATc > 2:5694722/1‑150 (MQ=255)cATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATc < 2:467746/150‑1 (MQ=255)cATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATc < 1:855294/150‑1 (MQ=255)cATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCACATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATc < 2:8183642/150‑1 (MQ=255) tCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGt > 2:8638377/1‑150 (MQ=255) ccGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGtt < 1:8378082/150‑1 (MQ=255) gggCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGc < 1:7345979/150‑1 (MQ=255) cGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGc < 2:2894713/150‑1 (MQ=255) tATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCg < 2:5110167/150‑1 (MQ=255) aTCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGc < 2:3122389/150‑1 (MQ=255) aTCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGc < 2:5716017/150‑1 (MQ=255) tCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGcc < 1:6444796/150‑1 (MQ=255) gCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCgg < 1:4393391/150‑1 (MQ=255) gCTGGGCGAGCGGCGCAAGAATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGCAGAGAGCCACCCGATCGTTGGCACCGGCGTCGCCgg > 2:3133013/1‑150 (MQ=255) cTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGgt < 1:204183/150‑1 (MQ=255) cTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGgt < 2:8526500/150‑1 (MQ=255) gAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgc > 1:2811445‑M2/1‑145 (MQ=255) aGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcg > 1:1167887‑M2/1‑144 (MQ=255) gcggcgCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgg > 1:6567222‑M2/1‑143 (MQ=255) gatccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCggg > 1:1873653‑M1/82‑150 (MQ=255) cggcgCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcggg > 2:1921205‑M2/1‑142 (MQ=255) atccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGc > 2:2156529‑M1/81‑150 (MQ=255) atccagaacagacgggcgatatgtggcagggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGc > 2:7344927‑M1/81‑150 (MQ=255) gcgcAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCCATCGTTGGCACCCGCTTCGCCGGTGttggcgggca < 1:3542371‑M2/150‑11 (MQ=255) cgcAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcac > 1:6866764‑M2/1‑139 (MQ=255) cAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgc > 1:6139691‑M2/1‑137 (MQ=255) aacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGccc > 2:4226623‑M1/75‑150 (MQ=255) aGGATATCGAGGCGCATCTGCTGCGGTCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgccc > 2:2546711‑M2/1‑135 (MQ=255) aGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgccc > 1:1034916‑M2/1‑135 (MQ=255) aGGAAATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACACATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgccc > 1:5607401‑M2/1‑135 (MQ=255) ggATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCCCGAAGATAGCAACCCCATAGGTGGCACCGGCTTCGCCGGTGttggcgggcccgcccg < 2:3831309‑M2/150‑17 (MQ=255) ggATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGGGGCCGCGCAGGGAGCAACCCCCACGGTGGCCACGGCTTCGCCGGGGttcgcggggccgcccc < 1:1521187‑M2/150‑17 (MQ=255) atatCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGGGTGGCCGCGAATAGAGCAACCCGATAGTTTGCACCGGGTTGGGCGGTGttggcggggacgcccgct < 2:4081005‑M2/150‑19 (MQ=255) tatCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGGTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctc > 2:365595‑M2/1‑131 (MQ=255) atCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGCAGAGAGCAACCCGATAGGTGGCACCGGCGTCGCCGGTGttcgcgggcacgcccgcgcc < 2:25144‑M2/150‑21 (MQ=255) acgggcgatatgtggcatggccggagattacgcgctcggccggtgtatggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTcc > 2:3013896‑M1/70‑150 (MQ=255) gcATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGGGCGGGGGGGGCCCCGAAGAGAGCAAACCGAGCGGTGGCACCGGCGTCGGCGGGGGTCGCGGGGCCCCCCCCACCcacaaccc > 1:5762473/1‑146 (MQ=255) gcATCTGCGGCGCGCCACCCCCGCCTGTTGGGCCCGCAAAACCCCTTGTCTGGCGGGGTCTTGTGGGAGCGGGCGGGCCCGCGACGATAGCAACCCGATCGTTGGCACCGGCTCCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGa < 2:2418570/150‑1 (MQ=21) ctgcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCCTTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAatgca < 2:8515363/150‑1 (MQ=255) tgcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGgtg < 1:4753777/114‑1 (MQ=255) tgcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGGTGGCCCCGGCTTCGCCGGGGGTCGCGGGCACGCCCGCTCCCACATCGATAatgcat > 2:7417814/1‑150 (MQ=255) gcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGGGGGCAACCCCATCGTTGGCACCGGCGTCGCCGGTGGTCGCGGGGACGCCCCCTCCCACATCGATGatgcatg > 1:727590/1‑150 (MQ=37) ccACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgc < 2:1115115‑M2/113‑6 (MQ=255) cACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTa < 2:8478654/150‑1 (MQ=255) cAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGGGGGCAACCCCATCGTTGGCCCCGGCGTCGCCGGGGGTGGCGGGCCCGCCCCCTCCCACAAAGATAATGCATGCCGTTAACGt > 2:1768766/1‑150 (MQ=25) aaGCCTGATGTGCCCGCAAAACTCTTTGTGTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTa < 1:8890052/150‑1 (MQ=255) gATGTGCCCGCAAAACTCCTTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCgg < 2:3336846/150‑1 (MQ=255) gATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCCCGAAGAGAGCAACCCCAACGTTGGCACCCGCTTAGCCGGTGGTCGCGGGCACCCCCCCGCCCACAACCAGAAAGCATTCCTATAACCTGCAcccg > 1:585180/1‑148 (MQ=255) tgCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCAACCCCCTCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAACGATAATGCAAGCCGTTAACGTACACCCGCCGa > 1:9128166/1‑150 (MQ=25) tgCCCGAAAAACTCTTTGTCTGGGGGGGTGTTGTGGGCGCGGGCGGGCCCGCGAATAGAGCACCCCGAGGGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGa < 1:8638377/150‑1 (MQ=25) cGCAAAACACATTGTCTTGCGCGGTGTTGGGGGAGCGGGCGGGCCCGCGACGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAgcgc < 1:7270838/150‑1 (MQ=38) gCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGcgcg < 2:3763827/150‑1 (MQ=255) gtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTcgcg < 2:1608850‑M1/67‑1 (MQ=255) gtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTcgcg > 1:1608936‑M1/21‑87 (MQ=255) tCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCCATAGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACCCCCGCTACCACATCGATAAAGCATGCCGTTAACGTAAACCCGCCGAGCGCGTaaaatc > 2:2429534/1‑146 (MQ=25) aTTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCg < 2:8789637/150‑1 (MQ=255) ttGTCTGGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCgg < 2:6972048/150‑1 (MQ=255) tggTCTTGCGCGGTCTTGTGGGTGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGGGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCgg < 1:6386814/148‑1 (MQ=255) ttGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCCCCTCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATg > 2:6738767/1‑150 (MQ=255) ttGCGCGGTCTTGTGGGAGCGGGCGGGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTAGCGGGCACGCCCGCTCCCACAACGAAAAAGCAAGCCTTTACCGTACACCCGCCGAGCGCGTAATCTCCGGCCATg > 2:4456262/1‑150 (MQ=37) tGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGc < 1:2967951/150‑1 (MQ=255) ggcgGTGTTGTGGGTGCGGGCGTGCCCGCGAAGAGAGCAACCGGATGGTTGGCCCGGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCca < 1:2384789/149‑1 (MQ=37) TGTGGGCGCGGGCGTGCCCGCGAAGAGACCACCCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGc > 1:4960052‑M1/1‑150 (MQ=255) aGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatat < 1:3683294‑M2/150‑96 (MQ=255) GGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTc < 1:746474‑M1/150‑1 (MQ=255) GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCt < 2:7233147‑M1/150‑1 (MQ=255) TGCCCGCGAAGAGAGCAACCCGATCGTTGGCCCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGa > 1:3341413‑M1/1‑150 (MQ=255) GCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGAt < 1:265090‑M1/150‑1 (MQ=255) cccGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccg < 1:5178339‑M2/150‑106 (MQ=255) cccGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccg < 1:4958065‑M2/150‑106 (MQ=255) CCCGCGACGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATc > 1:8072006‑M1/1‑150 (MQ=255) CCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCgg > 2:1244053‑M1/1‑99 (MQ=255) CCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCgg < 1:1244053‑M1/99‑1 (MQ=255) CCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATc < 1:7643689‑M1/150‑1 (MQ=255) ccGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaaggagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccgc < 2:4833939‑M2/150‑107 (MQ=255) CCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATcc < 2:4143762‑M1/150‑1 (MQ=255) CCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACACCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATcc < 2:7020990‑M1/150‑1 (MQ=255) CCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGAACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATcc < 2:7976299‑M1/150‑1 (MQ=255) CGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCct < 1:4105856‑M1/150‑1 (MQ=255) CGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCct < 2:1796115‑M1/150‑1 (MQ=255) CGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCct < 2:8740132‑M1/150‑1 (MQ=255) gcgAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccgctc < 1:3112887‑M2/150‑109 (MQ=255) gcgAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccgctc < 2:3201859‑M2/150‑109 (MQ=255) GCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCctg > 2:499744‑M1/1‑150 (MQ=255) GCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCctg < 1:5097548‑M1/150‑1 (MQ=255) GCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCctg > 2:5725549‑M1/1‑150 (MQ=255) GAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCctgct < 2:7547373‑M1/150‑1 (MQ=255) GAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCctg < 1:7410446‑M1/148‑1 (MQ=255) GAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCctgct < 2:4906552‑M1/150‑1 (MQ=255) gagagCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTgctgct > 2:1767675/1‑150 (MQ=255) tgagCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTc < 1:8234739/149‑1 (MQ=255) gagCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCg > 2:5771281/1‑150 (MQ=255) gagCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCg > 2:8135327/1‑150 (MQ=255) aaCCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCACGTCTGTTCTGGATCCTGCTGCTCGTTTg > 1:3033032/1‑150 (MQ=255) cccGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATACTGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCTCATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGcc < 2:7446251/150‑1 (MQ=255) cccGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGcc > 2:8103522/1‑150 (MQ=255) ccGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGctt > 2:8499702/1‑148 (MQ=255) ccGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGctt > 2:5277012/1‑148 (MQ=255) ccGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCt > 1:334016/1‑150 (MQ=255) cGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccgctcgcccagcgatagccg < 2:1327176‑M2/150‑124 (MQ=255) | CATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGA > NC_002947/5673477‑5673772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |