| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,089 | T→G | 12.9% | intergenic (+59/‑229) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,089 | 0 | T | G | 12.9% | 412.1 / 47.9 | 167 | intergenic (+59/‑229) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (41/98); new base G (3/19); total (50/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.39e-01 | |||||||||||
Only 100 of 170 total aligned reads displayed.
GGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCT > NC_002947/444940‑445235 | ggCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGGGGGCTTGCCCGCGAAt < 1:7719192/150‑1 (MQ=255)ggCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAt < 1:3883338/150‑1 (MQ=255) tGGGCAAGACCGAAGTCGAGCTCGGGGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTc < 1:3877319/150‑1 (MQ=255) tGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTc < 1:1225384/150‑1 (MQ=255) ggCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCATCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTGCCCCCGAATGCGTCCg > 2:2986595/1‑150 (MQ=255) gCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCg < 1:3172183/145‑1 (MQ=255) cAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCTGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGAt < 1:4191174/150‑1 (MQ=255) cAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGAt < 1:1516655/150‑1 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCa < 2:2414706/150‑1 (MQ=255) gACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAg < 2:771339/150‑1 (MQ=255) cGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGGGGCCCCCACTGCGTCCGCTAAGaca > 2:7775181/1‑150 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtt < 1:1457332/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtt < 2:8367447/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtt < 2:4803577/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtt < 1:9126789/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGaca‑aaattg < 1:670152/150‑6 (MQ=38) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtttt < 2:6496386/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtttt < 1:5238578/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtttt < 1:5632262/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtttt < 1:6378340/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtttt < 2:8428280/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtttt < 1:8077851/150‑1 (MQ=255) gCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTGGCCGCGCAAGCGTCCCCTCAGACACCCAAtttt > 2:5093121/1‑150 (MQ=255) gCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTg < 1:178158/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTc < 1:3596664/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTc < 1:505470/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTc < 1:2904332/150‑1 (MQ=255) ggCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTg < 2:3847882/150‑1 (MQ=255) gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑AAATTGTTGTCTga < 2:2390159/150‑2 (MQ=255) cgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTGTGGt > 2:5225636/1‑150 (MQ=255) gctaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACA‑AAATTGTTGTCTGATc < 2:6678371/147‑1 (MQ=25) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTc < 2:7992943/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGACCAGACA‑AAATTGTTGTCTGATc < 1:4890969/150‑1 (MQ=38) cAAAGGTCGTCACGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGACCAGACA‑AAATTGTTGTCTGATCg < 2:7676093/150‑1 (MQ=38) cAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGACCAGACA‑AAATTGTTGTCTGATCg < 2:9139516/150‑1 (MQ=38) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCgg < 2:3205940/150‑1 (MQ=255) aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCggg < 2:1108682/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGc < 1:7269408/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGc < 1:5265480/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGCCCGACCAGACA‑AAATTGTTGTCTGATCggac < 1:784197/150‑3 (MQ=37) cgtcAAGGCATCCGCCGCAATGCGGGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTAATTCAGCGCCGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCctct < 1:6496812/150‑1 (MQ=255) tcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTGCCCCCGAAAGCGTCCGGGCGGACA‑ACAAATATTTGTGGTGGGGccgcgtc > 1:6800816/1‑145 (MQ=255) aaGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTTCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTcgc < 1:7924046/150‑1 (MQ=255) aaGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTgg > 1:6700098/1‑136 (MQ=255) tgCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:8511761/149‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCTCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTcgcgt < 2:2562934/150‑2 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:3465918/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:7180481/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:3351809/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:3904066/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACA‑AAATTGTTGTCTGATCGGACGCATTCGCgg < 2:935717/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACA‑AAATTGTTGTCTGATCGGACGCATTCGCgg < 1:7031647/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACA‑AAATTGTTGTCTGATCGGACGCATTCGCgg < 2:7880979/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACA‑AAATTGTTGTCTGATCGGACGCATTCGCgg < 1:2370291/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACA‑AAATTGTTGTCTGATCGGACGCATTCGCgg < 1:4546444/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACA‑AAATTGTTGTCTGATCGGACGCATTCGCgg < 1:9099582/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACATACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:2055880/150‑1 (MQ=255) aTCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCa < 2:7224138/150‑1 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACA‑AAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGc < 1:7711284/150‑1 (MQ=17) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGcc < 2:7059876/150‑1 (MQ=255) aaTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTTCCCCCGAATGCGGCCGATCAGAAA‑ACAATTTTTTGTTGGCGGGGCGCGTCGCGGGCCAGcccccac > 2:5089305/1‑146 (MQ=255) aTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCgg > 1:4954651/1‑125 (MQ=255) aTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCgg < 2:4954651/125‑1 (MQ=255) tGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAAtttt > 2:1511749/1‑110 (MQ=255) tGGCCGGACCATCGACACCTACGCCTGAATCCTGGCTTCATCCCCTATTTCCGCGCCGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGACCGATCAGACA‑ACAATTTTGTGTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACaa < 2:7632886/150‑1 (MQ=37) catcGACACCTACGCCTGAATACTTGCGTCATCCCCTCTTTCAGCGCCTGCCTTGTAGTCGCGGGCTTGCCCGCGAATGCGTCGGACCACACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGATtgtg < 2:8205472/150‑1 (MQ=38) tcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCCCGCAAGCGGCCCCTCAGACA‑ACAAAGTTTGCGGGGCGGGCCGCGTCGCGGGCCACCCCCCGCCAACAACGGGGTGtggc > 2:3748259/1‑150 (MQ=255) gACACCACCGCGTTAATAGTTGGGACAGCCCCTATTCCCGCGCGGGCTTTGTAGGCGGGGGGTGGCCGGCTATGGGGCCCGATCACACA‑AAAATTTGGTGGGGTGGGGCCTCTGCGGGGCCACCCCCGCTCCTACAAGGGTTTGtggcat < 2:8730419/150‑1 (MQ=255) acacCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGc > 1:286698/1‑108 (MQ=255) cacCTCCGCGTTATTCCTGGCGTCAGCCCCTTTTCCCGCGCCTGCCTTGTCGGCGGGGGCTGGCCCGCTACTGCGCCCGAACACAAA‑AAAATTTGGTCTGGGCGGGCCACTGCGGGGGAACGCCCGCTCCTACAAGGGTTTGtggcatgg < 2:8073700/150‑1 (MQ=255) ccTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTTCCCCCCAATGCGTCCCCTCAGACA‑AAAAATTTTTGTTGTGGGGCCGCGTCGCGGGCAACCCCCCGCCAAAAAGGGGTTTTTGGAAGGCATTAcag > 2:7209568/1‑148 (MQ=255) gAATCCTTGCGTCATCCCCTATTTCCGCGCCTGCCTGGTAGGCGCGGGCTTGCCCGCGAATGCGTCCGACCAGACA‑ACAATTTTGTCTGGTGGGGCCTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAtt < 2:6640805/150‑1 (MQ=38) gAATACTTGCGACAGCCCCTTTTTCCGCGCCGGCCTTGTAGGTGGGGGCTTGCCCGCGACTGCGTCCTAACAGACA‑ACAATTTGGTCTGGTCGGGCCTGTTCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAtt < 2:6640801/150‑1 (MQ=255) aaTACTGGCTACACCCCCTTTTTCCGCGCCTCCTTTGTTGGCGGGGGCTGGCCCGCGATTCCGCCCGACCACAAA‑AAATTTTTGTGTGGGGGGGCCTGTCCGGGGGCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 2:3849656/150‑1 (MQ=255) tCATCCCCTATTCCCGCGCCTGCCTTGTCGGAGCGGGCTTGCCCGCGAATGCGTCCGCTCAGAAA‑ACAATTTTGTGTGGTCGGGCCTCTGCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTc < 2:7551977/150‑1 (MQ=255) aTCCCCTATTCCCGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGACTGCGTCCGATCAGACA‑CCAATTTTGTGTGGTCGGGCCTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGt < 2:8194288/150‑1 (MQ=38) cccccAATTCCCGCGCGGGCCTTGTAGGCGGGGGCTTGCCCGCGATTGCTGCCGAACCCCAA‑ACATTGTTGTGTGGTCGGGCCTCTCCGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTg < 2:8689215/149‑1 (MQ=255) cccTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTGCCCCCCAATTCGGGCGCTCAGACA‑AAAAATTTTTGTGGTCGGGGCGCGTCCCGGGCCATCCCCCACCAACAATGGTTTTTGGCATGGCATGAAAGATTTTCCAATTTTGGTGGc > 2:1414537/1‑150 (MQ=255) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCCCGAATGCGGACGCTCCCACA‑ACAAATTTTTGTGGGGGGGCCTCGTCGCGGGCCAGCCCCCTCCCACAAAGGGGTGTGGGCTGGCATGTCTGAATTGCCAATTTTCCTGGCg > 2:3649191/1‑150 (MQ=255) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCATTCCCGCGAAAGCCTACCATAAGACA‑ACAATTATGTCTGGTCGGGCCGCTTCGCCGGCAAGACCCCACCGACAAGGGTTTTTGGCAAGGCATGACTGATTTTCCAATTTTCGTGGCg > 2:7524415/1‑150 (MQ=255) ttcccgcgcCTGCCTTTTCGGGGCGGGCGGCCCGGCTACTGCGCCCCCCCCCACA‑CCAAGTGTGTCGGGTGGGCCCTCGACGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTaaa < 2:1922313/145‑1 (MQ=255) gcctttgttgGCGCGGGCGGCCCCGCGACTGCGTCCCAACCAACA‑CCATTTTGGGGTGGTGGGGCCTCCCCGCGGGCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 1:7537879/146‑1 (MQ=255) tggAGCGGGGTTGCCCGCTAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCATGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:6740798/149‑1 (MQ=255) gAGCGGGCTTGCCCGCTAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTCCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 2:4564600/150‑1 (MQ=255) aGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTACCTCCTTg > 2:5885032/1‑150 (MQ=255) gCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGGTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCCTAGTCCATCCTTgc > 2:5801179/1‑149 (MQ=255) gCGGGCTTGCCCGCGAAAGCGTCCGAACAGACA‑ACAATTTTGTCTGGGCGGGCCTCTACGCGGGCAAGCCCCCTCCTACAAGGGGTTGTGGCATGGCATGACTGATTTGCCAATTTTCGTGGCGTAAATGGCACCAAAGTCCATACTTGa > 1:8819618/1‑150 (MQ=255) gggCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa > 1:4081580/1‑150 (MQ=255) gCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGa > 2:694331/1‑150 (MQ=255) ttGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:7281445/1‑150 (MQ=255) cccGCGAAGAGGCCCGACCAGACA‑AAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:2994741/1‑150 (MQ=18) cccGCGAAGAGGCCCGACCAGACA‑AAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:5512363/1‑150 (MQ=18) ccGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACaa < 1:7185886/71‑1 (MQ=255) ccGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:444634/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:6504071/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:662023/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1901012/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:3094776/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:1368129/1‑150 (MQ=255) gAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCt > 2:1437650/1‑150 (MQ=255) | GGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACA‑ACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCT > NC_002947/444940‑445235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |