| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,742,435 | G→A | 11.3% | intergenic (+22/+49) | hutF → / ← PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,742,435 | 0 | G | A | 11.3% | 307.8 / 25.0 | 118 | intergenic (+22/+49) | hutF/PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (13/91); new base A (5/8); total (18/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.88e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.25e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
GGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCC > NC_002947/5742288‑5742584 | ggTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGcc < 2:7635375/150‑1 (MQ=255) gTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGccc < 2:1562683/150‑1 (MQ=255) gCGATCGCCAGGTGCGCGATGTGTTGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAATGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTc < 1:7234841/150‑1 (MQ=255) gCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTc < 1:430473/150‑1 (MQ=255) gCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTc < 1:3920390/150‑1 (MQ=255) gCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTc < 1:7893557/150‑1 (MQ=255) gATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTcgc < 1:7268520/150‑1 (MQ=255) gATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTcgc < 2:794185/150‑1 (MQ=255) tCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGt < 2:3369836/150‑1 (MQ=255) tCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGt < 1:2347245/150‑1 (MQ=255) tCGCCAGGTGCGCGAGGTGCTGGTGCCTGGGCAATGGGTGGTGCGCCA‑GGGGCGGCAGGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGt < 2:7974333/150‑1 (MQ=255) gCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGc < 1:8493802/150‑1 (MQ=255) gCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGc < 1:7056980/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCaa < 2:7490763/150‑1 (MQ=255) gTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGcc < 1:6570321/150‑1 (MQ=255) gTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGcc < 1:6568995/150‑1 (MQ=255) gcgcGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGccc < 1:4311164/150‑1 (MQ=255) cgATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGa < 1:8134486/150‑1 (MQ=255) gATGTGATGGTGAATGGGCTATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCTGCCCTTCGCGTGCAAGCCCGCGaa < 1:2136823/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGaa < 1:3706333/150‑1 (MQ=255) aTGTGATGGTGAATGGGCACTGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGACAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGGCTTGCACGCGAAg < 2:8522131/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGTTGAAAGCGGGCGTGCGTTTGCCAAGGTGTTGCGCCAGATTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGGCTTGCACGCGAAg < 1:6115726/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAg < 2:8902584/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGGCTTGCACGCGAAg < 1:5888956/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGGCTTGCACGCGAAg < 1:6471148/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAg < 1:3002930/150‑1 (MQ=39) tgtgATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAgg < 1:2228756/150‑1 (MQ=255) tgtgATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAgg < 1:4640937/150‑1 (MQ=255) gtgATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAggg < 2:1710893/150‑1 (MQ=255) gtgATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAggg < 1:1135244/150‑1 (MQ=39) tgATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGGCTTGCACGCGAAgggc < 1:8835268/150‑2 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTTCAGCCCATAGCGTGCAAGCCCGCCAAAGGtt > 2:6714138/1‑150 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGtt < 1:3792436/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGtt < 1:8383557/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGtt < 1:7920187/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAgggct < 1:4855020/150‑3 (MQ=38) aTGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAgg > 2:8938945/1‑146 (MQ=39) aTGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAgg < 1:8938945/146‑1 (MQ=39) aTGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTATTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTg < 2:7877681/150‑1 (MQ=255) aTGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTATTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTg < 2:7877650/150‑1 (MQ=255) aTGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTATTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTg < 2:7877666/150‑1 (MQ=255) tGGTGCATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgc < 2:4926214/150‑1 (MQ=255) tGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGGCTTGCACGCGAAGGGCTgc < 1:1164753/150‑1 (MQ=39) tGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGGCTTGCACGCGAAGGGCTgc < 1:1166845/150‑1 (MQ=39) gTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaa < 2:3340737/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaac < 2:7464996/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGGCTTGCACGCGAAGGGCTgcaac < 2:2700749/150‑1 (MQ=38) tGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGGCTTGCACGCGAAGGGCTgcaac < 2:2700798/150‑1 (MQ=38) tGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGTAg < 2:5340310/113‑1 (MQ=255) tGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGTAg > 1:5340310/1‑113 (MQ=255) ggggCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGATTGCCAAGGAGTTGCCCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaacgcaa < 2:8622421/149‑1 (MQ=255) gCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTTCAGCCCATAGCCGGCAAACCCCCCCAGGGGTGGAACCCCAccc > 2:6004137/1‑150 (MQ=255) gtgCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCTAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTc < 2:5230508/150‑1 (MQ=255) tgCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCCTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCa < 2:6007478/150‑1 (MQ=255) ggcgcCC‑GGGGCGGCATGCCCAGGACGATGAACGCGGGCGGGCGTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACGGGGGTTGCGTTGCCGCCCTTCGCGTGCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCa < 2:8887997/149‑1 (MQ=255) cccctggggCGGCTTGCCCTGGCAGATCACCGGGGGGGGGTGTTGGCATCTGTGTGGCCCACGCTTTTGGGCGGAGCTTCCGGGGGTTGCGTGGCAGCCCTTCGCGTGCAAGCCCGCGACGGGTTCAAACGCAACCCCAAAAAACTCAGt < 2:4054542/145‑1 (MQ=255) ggcgccATGCCCAGCAATATCACCCCGGGGGGGCGTTGGCCATGGTGTGGCGCCCGCTTTTGGGCTGAGCGTACGGGGGTGGCTTCGCCGCCCTTCGGGTGAACGCCCGCCACGGTTTCCAACGCAACCCCAAAAAACTCAGTGCAtttt < 2:945635/150‑1 (MQ=255) gCCCAGGAAGATGACCGCGGGGGGGGGTTTGCCTTGGTGTTGCGCCAGCTTTTGGGGTGAGCGTAGGGGGGTGGCGTGGCAGCCCTTCGCGGGCACGCCCGCGACGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTAttt < 2:3168622/150‑1 (MQ=255) acgATGAACGCGGGCGGGCGTTGGCCAAGGTGTTGCGCAAGCTTTTGGGCTGCGCGGACCGGGGTTGCGTTGCCGCCCTTCGCGTGCACGCCCGCGATGGGTGGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATc < 2:6293313/148‑1 (MQ=255) aaGATGAAAGCGGGCGGGCGTTTGCCATGGTGTTGCGCCAGCTTTGGGGCTGAGCGTACCGGGGTTGCGTTGCCGCCCTTCGCGTGCAAGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATc < 2:2798517/150‑1 (MQ=255) gATGAACGCGGGCGGGCGTGTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGTTTGCGTGGCAGCCCTTCGCGTGAAAGCCCGGGATGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCgg < 2:5810021/150‑1 (MQ=255) cgggcgggCGTTTGCCACGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACGGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGacgcccgc > 2:6058943‑M2/1‑142 (MQ=255) ggcgggcgTTTGCCAACGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCCGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCa < 1:9043782/150‑1 (MQ=255) cgggcgTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGGGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGa < 2:285028/150‑1 (MQ=255) gggcgTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGAt < 2:3734550/150‑1 (MQ=255) gTTTGCCACGGGGTGGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTCGCTGATCGGACGCCCGCCAGATCAAg < 2:8085861/150‑1 (MQ=255) tttGCCATGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACGGGGGTTGCGTTGCAGCCCTTCGCGTGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGc < 1:9145099/150‑1 (MQ=255) cttgttgtTGCCCCTGGTTTGGGGCTGCGCGTACGGGGTTTGGGTTGCCGCCCTCGGGGTGAACGCCGGCTAGGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTg < 2:2252491/145‑1 (MQ=255) aatggtggtGCCCCAGCTTTTGGGCGGAGCGTACCGGGGTTGGTTTGCAGCATTTGGCGTGCATGCCGGCTTTGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTg < 2:8502768/147‑1 (MQ=255) tggtggtGCGCCAGCTTTGGGGCGGCGCGTCCCGGGGTTGCGTGGCCGCCCTTCGCTTGCACGCCCGCGAGGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGgt < 2:315689/149‑1 (MQ=255) gttttGCGCCAGCTTTTGGGCTGTGGGTACGGGGGTTGCTTTGCAGCCCTTGGCTTGAACGCCCGCTATGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGgtgt < 2:6291685/147‑1 (MQ=255) ttGCGCCAGCTTTTGGGCTGCGCGTACCGGGGTTGCGTTGCAGCCCTGCGCGTGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCAt < 2:222736/150‑1 (MQ=255) gcCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAccc < 2:7326536/150‑1 (MQ=255) gcttgggggCTTCGCGTCCCGGGGTTGCGTTGCCGCCCTTCGCGTGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctgc < 2:1174533/144‑1 (MQ=255) ggCTGCGCGTACGGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCcgcg < 2:933697/150‑1 (MQ=255) cGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGa < 2:4772074/150‑1 (MQ=255) gTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAc < 2:8711286/150‑1 (MQ=255) tccggggtTTGCGTTGCCCCCCTTGGCGTGCACGCCCGCTATGGTTTCCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 1:4307001/146‑1 (MQ=255) ggggTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagcag < 2:4909815/150‑1 (MQ=255) gggTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCTAAGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAgg < 2:8433157/150‑1 (MQ=255) gggTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCTTTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAgg < 2:2948923/150‑1 (MQ=255) gggTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAgg < 2:9094713/150‑1 (MQ=255) gttgcgttgcAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGtt > 1:4151751/1‑150 (MQ=255) gttgcgttgcAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGtt < 2:6673988/150‑1 (MQ=255) gttgcgttgcAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGtt < 2:6673887/150‑1 (MQ=255) ttgcgttgcAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtc < 2:3665054/150‑1 (MQ=255) gggttgcCGCCCTTGGCGTGCACGCCCGCGATGGGTTGAAACGCGACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc < 2:3588778/148‑1 (MQ=255) gcgttgcAGCCCCTCGCTTGCAAGCCCGCGAAGGGTTGCAACGCAACCCAAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc < 1:3911628/150‑1 (MQ=255) gttgcAACCCTTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCGAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCAc > 1:149410/1‑150 (MQ=38) ttgcAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 1:1771012/1‑150 (MQ=255) ttgcAACCCTTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 1:537037/1‑150 (MQ=38) tgcAACCCTTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGc > 2:2173152/1‑150 (MQ=38) gcAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 1:5843259/1‑150 (MQ=255) gcAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 1:6633520/1‑150 (MQ=255) gcAACCCTTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 1:2174863/1‑150 (MQ=38) cAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAATCTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTc > 2:5807780/1‑150 (MQ=255) cAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTc < 2:3506269/150‑1 (MQ=255) aGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 2:8636979/1‑150 (MQ=255) aGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 1:8601085/1‑150 (MQ=255) aGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 2:9130115/1‑150 (MQ=255) | GGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCA‑GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCC > NC_002947/5742288‑5742584 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |