| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,753,714 | A→C | 11.7% | intergenic (‑174/‑297) | thiI ← / → glnA | tRNA sulfurtransferase/glutamine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,753,714 | 0 | A | C | 11.7% | 677.8 / 68.5 | 240 | intergenic (‑174/‑297) | thiI/glnA | tRNA sulfurtransferase/glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base A (103/108); new base C (14/14); total (117/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.70e-01 | |||||||||||
Only 100 of 263 total aligned reads displayed.
GCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGCCC > NC_002947/5753565‑5753863 | gCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCaaa < 2:1931816/150‑1 (MQ=255)gCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCaaa < 1:5298816/150‑1 (MQ=255)gCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCaaa < 2:8718846/150‑1 (MQ=255) cGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGGGCAAAGc > 1:1651203/1‑150 (MQ=255) aaaaTGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGccc < 2:2531140/150‑1 (MQ=255) aaaaTGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGccc < 1:8545220/150‑1 (MQ=255) aaTGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAAGGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGt < 2:1561481/150‑1 (MQ=255) aTGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTa < 1:3694531/150‑1 (MQ=255) aTGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTa < 1:5533530/150‑1 (MQ=255) gAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACGGGCTTTGCACCGCCTGTAgg < 2:7910067/150‑1 (MQ=38) aGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGa < 2:8404452/150‑1 (MQ=255) gggCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGgcgc < 1:2231737/150‑1 (MQ=25) gggCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGc > 1:5543371/1‑150 (MQ=255) gcgcGAATTATATCTGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCgg < 2:6017715/150‑1 (MQ=25) gcgcGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCgg < 2:1770403/150‑1 (MQ=25) gcgcGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACGGGCTTTGCACCGCCTGTAGGCGCgg < 1:6093353/150‑1 (MQ=38) gcgcGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCgg < 1:2520434/150‑1 (MQ=255) cgcgAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCggg < 1:6986028/150‑1 (MQ=255) gcgAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGt < 1:644255/150‑1 (MQ=255) aTTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTAc < 2:7004241/150‑1 (MQ=255) ttATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTAcc < 1:4414641/150‑1 (MQ=255) tataTCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTAccc < 2:4548611/150‑1 (MQ=255) tatCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCcgc < 1:7809821/150‑1 (MQ=255) tCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACGGGCTTTGCACCGCCTGTAGGCGCgg < 1:8584429/138‑1 (MQ=37) tCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACGGGCTTTGCACCGCCTGTAGGCGCgg > 2:8584429/1‑138 (MQ=37) tCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGa > 2:1133449/1‑150 (MQ=255) tCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGa > 2:1489888/1‑150 (MQ=255) ggAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGcc > 2:7283607/1‑125 (MQ=255) gAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAaga < 1:8904282/150‑1 (MQ=255) cTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGAGAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTa < 2:8444643/150‑1 (MQ=255) tCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGGAGGAGCGGGTTTACCCGCGAAGAGGCCCTAg > 1:4855267/1‑150 (MQ=255) tCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCCCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTAACCGAGAAGAGGCCCGAg > 2:65246/1‑150 (MQ=255) cAGGATTTGCCCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGCGGCCAGGTTTTGCAGCGCCTTTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTCGGAGCGGGTTTACCCGCGAAGAGGCCCTAGa < 1:6587269/150‑1 (MQ=255) aGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCGACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCAAGaa > 1:2026823/1‑150 (MQ=255) aGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCCCGCCTACAGGCGGTGCAAAGCCCCGAGGAGCGGGTTTACCCGCGCAGAGGCCCAAGaa > 1:6402360/1‑150 (MQ=255) aTTTGACCAACTTTTGATCAGACGTTTTTATATAATTGCTGAGGCCTGTTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACTGGCGGTGAAAAGCCCGTAGGAGGGGGTTTACCCGCGAAGAGGCCCTAGAACCt < 1:190167/150‑1 (MQ=38) aTTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCt > 1:1399535/1‑150 (MQ=255) aTTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCt > 1:4454596/1‑150 (MQ=255) tttGACCAACTTTTGATCAGACGCTTTGATATAATTGCAGCGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTGCGCGGGTAAACCCGCGCCTACCGGGGGTGCAAAGCCCGTCGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTg < 1:2674883/150‑1 (MQ=37) tttGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTg < 2:6815841/150‑1 (MQ=255) ttGCCCAACTTTTGATCAGACGATTTGATATAAATGCAGAGGCCAGTTTTTGCAGCGCCTGTTCGGGCCCTTTCGCGGGTAAACCCGCGCCTACCGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTgg < 1:1232684/150‑1 (MQ=37) aCCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAAACCGCGCCAACAGGCGGTGCAAAGCCCGTAGGAGCGGGGTTACCCCCGAAGAGGCCCTAGAACCAGGcac > 1:5753837/1‑150 (MQ=38) cAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCacac < 1:8345442/150‑1 (MQ=255) cAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCacac < 2:3621613/150‑1 (MQ=255) cTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCAGGCAcaccac > 2:3082311/1‑150 (MQ=255) tGATCATAAGCTTTGATATAAATGCAGTGGCCTGGTTTTGCAGCGCGTGTTCGGGCCCTTTCGGGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGTGCGGTTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTcac < 1:1176329/150‑1 (MQ=255) tGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTcac < 2:5230195/150‑1 (MQ=255) tCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCgg > 1:5238707/1‑105 (MQ=21) tCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTAAACCcgctc > 1:7220503/1‑115 (MQ=255) aGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTcacgccac > 2:2094048/1‑150 (MQ=255) aGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTcacgccac > 2:5420930/1‑150 (MQ=255) gAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTctcgcc < 2:8953189/147‑1 (MQ=255) tttGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAAGCTGGCACACCACTCACGCCACGCAccc > 2:8791791/1‑150 (MQ=255) gagtTAATTGCAGAGGCCTGGTTTTGCTGCGCCTGTTCCGGCCTTTTGGGGGTTAAACCGGCGCCTACGGGGGGTGCAAAGCCCGTAGGAGGGGTTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTAt < 1:6273154/150‑1 (MQ=255) agaTAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTAtt < 2:670886/150‑1 (MQ=255) aTAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAAACCCCGCCTACACGCGGTGCAAAGCCCGTAGGAGCGGGTTTAACCGCGCAGAGGCCCTAGAAACTGGCACAACAAAAACCCCACCCACCCAATTgg > 1:3347064/1‑150 (MQ=255) tGCAGAGGCCAGGTTTTGCAGCGCCTGTTAAGGCCCTTTCGCGGGTAAAAACGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGGTTACCCCCGAAGATGCCCTAGAAACAGGCAAACCCCGCACCCCACCCCCCCGCTTGGTGCGa > 2:2351629/1‑150 (MQ=255) agagGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGacac < 2:7625501/150‑1 (MQ=255) ggCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACTCCACGCACCCTATTGGTGCAACACGAt < 2:4069624/150‑1 (MQ=255) gcaaGGTTTTGCAGCGCCAGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCATGCACACCACACACGCCACGCACCCTATTGGTGCGACACGATc > 2:3641464/4‑150 (MQ=38) gCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCGACAGGCGGTGCAAAGCCCGGAGGAGCGGGTTTACCCGCGAAGAGGCCCt > 1:2112458/1‑100 (MQ=255) tttGCCGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTCCAGGCGGTGCAAAGCCCGTCGGAGGGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAAc < 1:79244/150‑1 (MQ=255) tttGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAAc < 1:2994157/150‑1 (MQ=255) gCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCa < 1:5677443/150‑1 (MQ=255) gCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAAACCGCCCCGACAGGCGGTGCAAAGCCCGTAGGGGCCGGGTTACCCGCGAAGAGGCCCGAGAACCAGGCACACCCCACACGCCACGCACCCAATTGGTGCGACACGATCaaaaaaacca > 1:6356177/1‑146 (MQ=255) aGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATc < 2:7743103/150‑1 (MQ=255) aGCGCCTGTTCCGGCCCTTTCGCGGGTAAAACCCCCCCGACAGGCGGGGCAAAGCCCGGAGGAGCGGGGTTACCCCCGAAGAGGCCCTAGAACCGGGCACACCACACACGCCACCCACCCAATTGGTGCGACACGATCAAAAAAAGCATc > 1:8629964/1‑150 (MQ=255) ccTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCATACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTaa > 2:4355953/1‑150 (MQ=255) ttCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCGATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGt > 1:3791323/1‑150 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGAGCAAAAAACGCATCGGAAGGGGGcc > 2:5657055/1‑149 (MQ=255) ggCCCTTTCGCGGGTAAAACCGCGCCTACAGGCGGTGCAAAGCCCCTAGGAGCGGGTTTAACCGCGAAGAGGCCCTAGAACCAGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATAGTAAGGGTGCAc > 1:5117764/1‑150 (MQ=39) cTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTc < 2:3828393/150‑1 (MQ=255) gcgcgGGTTTACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCAcc > 2:2753405/2‑150 (MQ=255) gcgGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCg > 1:319595/1‑150 (MQ=255) ggTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTa > 2:7499968/1‑150 (MQ=255) gTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTaa > 2:1048163/1‑150 (MQ=37) cccGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCaa > 2:4928946/1‑150 (MQ=255) cccGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCaa < 1:517855/150‑1 (MQ=255) ccGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCCTAGAACTTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc > 2:3210099/1‑150 (MQ=37) ccGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc > 1:1306155/1‑150 (MQ=37) ccGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc > 2:6274195/1‑150 (MQ=37) ccGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc > 1:5485989/1‑150 (MQ=255) ccGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc > 1:2544092/1‑150 (MQ=255) ccGCGCCTACAGGCGGTGCAAAGCCCGGAGGAGCGGGTGTACCAGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc > 1:5663008/1‑150 (MQ=255) cgcgCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACg > 2:5758977/1‑150 (MQ=255) gcgcCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGc > 2:6345759/1‑150 (MQ=255) tACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAAt > 2:7174192/1‑150 (MQ=255) aCAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATg > 2:408188/1‑150 (MQ=255) aCAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATg > 2:2192551/1‑150 (MQ=255) ggCGGTGCAAAGCCCGTTGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCAc < 1:2265823/150‑1 (MQ=255) ggCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCAc < 2:5048317/150‑1 (MQ=255) ggCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCAc > 1:2782624/1‑150 (MQ=255) gCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACg > 2:7481715/1‑150 (MQ=255) tGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCaaa < 2:5537473/150‑1 (MQ=255) aaaGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGTCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGc > 2:6618319/1‑150 (MQ=255) aaaGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGc < 2:7365877/97‑1 (MQ=255) aaaGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGc > 1:7365923/1‑97 (MQ=255) aaaGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGc < 1:408188/150‑1 (MQ=255) aaaGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGc > 1:911230/1‑150 (MQ=255) aaGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGcc > 1:2910876/1‑150 (MQ=255) | GCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGCCC > NC_002947/5753565‑5753863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |