| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,098 | T→C | 20.6% | intergenic (+68/‑220) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,098 | 0 | T | C | 20.6% | 375.7 / 73.2 | 174 | intergenic (+68/‑220) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (52/81); new base C (6/28); total (60/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.54e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
CAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTT > NC_002947/444949‑445247 | cAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCTGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGAt < 1:4191174/150‑1 (MQ=255)cAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCATTCCCCCC‑AATGCGTCCGAt > 2:6640407/1‑150 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCa < 2:2414706/150‑1 (MQ=255) gACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAg < 2:771339/150‑1 (MQ=255) gACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAg > 2:1457332/1‑150 (MQ=255) gACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAg < 2:771000/150‑1 (MQ=255) gAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGacaa < 2:1216421/150‑1 (MQ=255) gTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGAcaacaa < 1:508795/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtt < 1:9126789/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtt < 2:4803577/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGacaaaattg < 1:670152/150‑6 (MQ=38) aGCTCGGCGCACAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACTCCTACTCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGTCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtttt < 2:6943357/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtttt < 1:7824167/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtttt < 1:6378340/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtttt < 1:5632262/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtttt < 1:5238762/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtttt < 1:5238578/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtttt < 2:6496386/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtttt < 2:8428280/150‑1 (MQ=255) gCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTg < 1:178158/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTc < 1:3596664/150‑1 (MQ=255) ggCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTg < 2:3847882/150‑1 (MQ=255) ggCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTg < 1:4493234/150‑1 (MQ=255) gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTgg < 2:8566935/150‑1 (MQ=255) gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAAAATTGTTGTCTga < 2:2390159/150‑2 (MQ=255) gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTga < 2:386023/150‑2 (MQ=25) cgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTGTGGt > 2:5225636/1‑150 (MQ=255) gctaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTGATc < 2:6678371/147‑1 (MQ=25) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGACCAGACAAAATTGTTGTCTGATc < 1:4890969/150‑1 (MQ=38) cAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCg < 2:3693461/150‑1 (MQ=255) cAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGACCAGACAAAATTGTTGTCTGATCg < 2:9139516/150‑1 (MQ=38) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCgg < 2:3205940/150‑1 (MQ=255) aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCggg < 2:5695189/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGc < 1:7269408/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGc < 1:8444266/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGACCAGACAAAATTGTTGTCTGATCggac < 1:9028645/150‑3 (MQ=38) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGCCCGACCAGACAAAATTGTTGTCTGATCggac < 1:784197/150‑3 (MQ=37) gtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCtt < 2:7671043/150‑1 (MQ=255) gtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCtt > 2:8354663/1‑150 (MQ=255) tcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTGCCCCCG‑AAAGCGTCCGGGCGGACAACAAATATTTGTGGTGGGGccgcgtc > 1:6800816/1‑145 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:7823335/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:3351809/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:7180481/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:935717/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 1:2370291/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 1:4546444/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:3488369/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 1:7031319/150‑1 (MQ=18) aTCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCa < 2:7224138/150‑1 (MQ=255) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCaa < 1:750664/150‑1 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGc < 1:7711284/150‑1 (MQ=17) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGc < 1:3619271/150‑1 (MQ=17) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGcc < 2:7059876/150‑1 (MQ=255) gaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑GATGCGTCCCCTCACCCAACAAGTTTGTCTGGGGGGGGCTCGTCGCGGGCAAGCCCGc > 2:8065725/1‑150 (MQ=255) aaTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTTCCCCCG‑AATGCGGCCGATCAGAAAACAATTTTTTGTTGGCGGGGCGCGTCGCGGGCCAGcccccac > 2:5089305/1‑146 (MQ=255) aTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCgg < 2:4954651/125‑1 (MQ=255) tGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAtttt < 1:1511749/110‑1 (MQ=255) catcGACACCTCCGCCTTAATACTTGCGACATCCCCTATTTCAGCGCCTGCATTGTAGCTGCGGGCTTGCCCGCG‑AATGCGACCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgtg < 2:8205146/150‑1 (MQ=38) tcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCCCG‑CAAGCGGCCCCTCAGACAACAAAGTTTGCGGGGCGGGCCGCGTCGCGGGCCACCCCCCGCCAACAACGGGGTGtggc > 2:3748259/1‑150 (MQ=255) acacCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGc > 1:286698/1‑108 (MQ=255) acacCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGc < 2:286698/108‑1 (MQ=255) cacCTCCGCGTTATTCCTGGCGTCAGCCCCTTTTCCCGCGCCTGCCTTGTCGGCGGGGGCTGGCCCGCT‑ACTGCGCCCGAACACAAAAAAATTTGGTCTGGGCGGGCCACTGCGGGGGAACGCCCGCTCCTACAAGGGTTTGtggcatgg < 2:8073700/150‑1 (MQ=255) ccTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTTCCCCCC‑AATGCGTCCCCTCAGACAAAAAATTTTTGTTGTGGGGCCGCGTCGCGGGCAACCCCCCGCCAAAAAGGGGTTTTTGGAAGGCATTAcag > 2:7209568/1‑148 (MQ=255) tGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCa > 1:6510324/1‑73 (MQ=255) gAATCCTTGCGTCATCCCCTATTTCCGCGCCTGCCTGGTAGGCGCGGGCTTGCCCGCG‑AATGCGTCCGACCAGACAACAATTTTGTCTGGTGGGGCCTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAtt < 2:6640805/150‑1 (MQ=38) atgcggggCGTCACCCCCTATGCCCGGCCCGGCGTTGTCGGCGGGGGGTGCCCCGCG‑ACGGCGCCCTCTCACACAACACTTGTGTGTGGCGGGGCCGCGGGGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 2:7900112/143‑1 (MQ=255) tCATCCCCTATTCCCGCGCCTGCCTTGTCGGAGCGGGCTTGCCCGCG‑AATGCGTCCGCTCAGAAAACAATTTTGTGTGGTCGGGCCTCTGCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTc < 2:7551977/150‑1 (MQ=255) cccccAATTCCCGCGCGGGCCTTGTAGGCGGGGGCTTGCCCGCG‑ATTGCTGCCGAACCCCAAACATTGTTGTGTGGTCGGGCCTCTCCGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTg < 2:8689215/149‑1 (MQ=255) cccTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTGCCCCCC‑AATTCGGGCGCTCAGACAAAAAATTTTTGTGGTCGGGGCGCGTCCCGGGCCATCCCCCACCAACAATGGTTTTTGGCATGGCATGAAAGATTTTCCAATTTTGGTGGc > 2:1414537/1‑150 (MQ=255) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCC‑AAATCGTCCCATCAGTCAACAAATTTGTCTGGGAGGGCCGCGTGGCGGGCAAGCCCCCTCCGACAAGGGTGTTTGGCAAGGCATGAATGATTTGGCAATTTTAGTGGCg > 2:4554678/1‑150 (MQ=255) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCATTCCCGCG‑AAAGCCTACCATAAGACAACAATTATGTCTGGTCGGGCCGCTTCGCCGGCAAGACCCCACCGACAAGGGTTTTTGGCAAGGCATGACTGATTTTCCAATTTTCGTGGCg > 2:7524415/1‑150 (MQ=255) tggAGCGGGGTTGCCCGCT‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCATGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:6740798/149‑1 (MQ=255) tggAGCGGGCTTGCGCTCT‑AAGGCTTCCTCTCCTCAAACATTTTGGTCGGGGGGGGCCTCTTGGCGGGAATGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:1968839/149‑1 (MQ=255) aggaggGGGCTTGCCCGCG‑ACTGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:2124509/150‑1 (MQ=255) gcgggggTTGCCCGGGTATTGCGTCCTATCACACAAAATTTTTGTGGGGCGGGGCCTCTGCGCGGCCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 1:2986595/147‑1 (MQ=255) aGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTACCTCCTTg > 2:5885032/1‑150 (MQ=255) gCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTTTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTTCCATTTTTCGTGGCGTAAATTGCACCATAGTCCATCATTGa > 1:7998886/1‑150 (MQ=255) gggCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa > 1:4081580/1‑150 (MQ=255) ttGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:7281445/1‑150 (MQ=255) cccGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:8784295/1‑150 (MQ=255) cccGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:5512363/1‑150 (MQ=18) cccGCG‑AAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:2994741/1‑150 (MQ=18) ccGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGGGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:4993116/1‑150 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGTCGTAAAt < 1:7172161/119‑1 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1901012/1‑150 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:662023/1‑150 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:6503236/1‑150 (MQ=255) cgcg‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:1368129/1‑150 (MQ=255) agaggcccGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 1:9042438/7‑150 (MQ=21) gTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 2:1601660/1‑146 (MQ=255) gTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa < 1:1601660/146‑1 (MQ=255) gTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 2:400243/1‑150 (MQ=255) tCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 1:140473/1‑150 (MQ=255) ccGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa < 1:1263837/139‑1 (MQ=255) ccGACCAGACAAAATTGTTGTCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 1:7055673/86‑1 (MQ=18) ccGACCAGACAAAATTGTTGTCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt > 2:7055673/1‑86 (MQ=18) cGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAg > 2:1011676/1‑150 (MQ=255) cGACCAGACAAAATTGTTGTCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAg > 1:7225067/1‑150 (MQ=38) gATCAGACAACAATTTTGTCTGGTCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt > 2:300651/1‑150 (MQ=255) aTCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 1:6246004/1‑150 (MQ=255) | CAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTT > NC_002947/444949‑445247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |