Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,761,474 | G→A | 5.3% | intergenic (+105/+51) | trmL → / ← secB | tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,761,474 | 0 | G | A | 5.3% | 472.0 / 10.6 | 152 | intergenic (+105/+51) | trmL/secB | tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB |
Reads supporting (aligned to +/- strand): ref base G (90/53); new base A (6/2); total (97/55) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.11e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.87e-01 |
Only 100 of 157 total aligned reads displayed.
GGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGGAA > NC_002947/5761327‑5761623 | ggTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTTAACCCCCGCCGACGCAGGCCGAGGGAACGGCGCAATCCCCGGTAGGAGCGGGGTTACCC‑GCGAAGAGGCCCCCG‑cc > 1:6051579/1‑150 (MQ=255) ggTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAAACCCCTCCTACGCAGGCCGGGGGAACCGCGCAAACCCCAGTAGGAGCGGGTTTAACC‑CCGAAGAGGCCCCCG‑cc > 2:127067/1‑150 (MQ=255) ggggcggcAGACGGGGTTGGCCGGGCGCTGGGGGGTCCCGTGGGGGGGCCGCTCCGCGGGTACCCCCGCGCCCCCCCCGCCGGCGGCACGGGCCCACCCCCGTGTCGGAG‑GGGTTTCCCCGGCGAAGAGGCCCGCG‑CCGGCAACaaaaaa < 2:8603004/148‑1 (MQ=255) gTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACCCAGGCCGAGGGAACGGCGCAAACCCCGGTAGGAGCGGGGTTAACC‑GCGAAGAGGCCCGCG‑CCGGCAACaaaaaa > 2:681138/1‑150 (MQ=39) gTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAAACCCCACCGACGCAGGCCGAGGGCACCGCGCAAACCCCGGTAGGAGCGGGTTTAACC‑CCGAAGAGGCCCGCG‑CCCGCAACaaaaaa > 2:1037660/1‑150 (MQ=255) ggcAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCCCTCCAACGCAGGGCGAGGGAACGGCGCCAACCCCGGGAGGAGCCGGGTTACCC‑GCGAAGATGCCCCCGCCCGCCAACaaaaaccggc > 2:6281298/1‑145 (MQ=255) tttGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAAACCGCTCCAACCCAGGCCGCGGGACCGGCGCAATCCCCTGTATGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCCACAAAAAAGCGCCCCGAgcggcgg > 2:5412153/1‑149 (MQ=38) ccGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAAACCGCGCCGACCCCCGCCGCGGGAACCGCGCAAACCCCGGGTGGAGCGGGGTTACCC‑GCGACGAGGCCCGCC‑CCCGCACCCAAAAAGCGCCCCCAGCGgcgcagtc > 2:6199328/1‑146 (MQ=255) gggTGCTGAGGTGTGGCCGGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTCCGCCGGCCGCGGGAACGGCGCAATCCCCTGTAGGAGGGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAGAAAGCGCCTCTCGGGGCGCtttttt < 2:5940059/150‑1 (MQ=25) gggggggCCTCTGGGCGGTTAAACCGGCCCCTCGGCCGGCGTGGGCACCGGCG‑ACCCCCCTGTTGGGCGGGGTTTACCCGGCGAAGCGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACt < 1:5979979/146‑1 (MQ=255) CGGGCCTCGTCGCGGGTAAACCCGCTCCTCCGCCGGCCGAGGTAAGGGCGCAATCCCCTGTAGGAGCGGTTTTACCC‑GCTAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGca > 2:675843‑M1/1‑150 (MQ=255) gCCTCTTCGCGGGTAAAACCCCTCCGACGCAGGCCGAGGGAACGGCGCAATCCCCCGTAGGAGCGGGGTTACCC‑GCGTATAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGCGAGGCGCGGTCTTGTAACCGGCCGGGAGTACTGCACAg > 2:6523372/1‑150 (MQ=255) CCTCTTCGCGGGTAAACCCGCGCCGACGCAGGCCGAGGGAACGGCGCAATCCCCGGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCCGTAATTACAGCACAGt < 2:1431086‑M1/150‑1 (MQ=255) TCTTCGCGGGTAAACCCGCTCCGACGCAGGCCGAGGGAACGGCGCAATCCCCGGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAg < 2:5596858‑M1/150‑1 (MQ=255) TTCGCGGGTAAACCCGCTCCTAAGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTTCCC‑GCGAAGAGGCCCGCG‑CCGGCAACCAAAAAGCGCCCCGCGAGGCGCTTTCTTGAAACCCGCAGGAAGTACTGCACAGTAGgc < 2:5630269‑M1/150‑1 (MQ=255) gaGCGGGTTTACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGgcg < 1:2874868‑M1/148‑1 (MQ=255) GCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCt < 1:4731798‑M1/150‑1 (MQ=255) GCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCt < 2:1124316‑M1/150‑1 (MQ=255) gcgggtaaacccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCt > 2:879081‑M2/81‑150 (MQ=255) gGGGTACCCCCGCTCCTCCGCCGGCCGGGGGAACGGCGCAACCCCGGGTCGGCGGGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCtt > 2:1420311‑M1/2‑150 (MQ=255) GGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTc < 1:6159007‑M1/150‑1 (MQ=255) GTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGcaca > 2:6213219‑M1/1‑137 (MQ=255) GTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGcaca < 1:6213219‑M1/137‑1 (MQ=255) TAAACCCGCTCCTACGCTGGCCGAGGGAACGGCGCAATCCCGTGTTGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCAcc > 2:9085741‑M1/1‑150 (MQ=255) TAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCAcc < 2:8397474‑M1/150‑1 (MQ=255) taaacccgcgcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcA‑CAGGCAACACAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCAcc < 2:2542925‑M2/75‑1 (MQ=255) AAACCCGCTCCTAAGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTAACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCAccc < 2:5041831‑M1/150‑1 (MQ=255) ACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGc < 1:2182868‑M1/150‑1 (MQ=255) ACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGc < 1:2182865‑M1/150‑1 (MQ=255) acccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcA‑CAGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGc > 1:8979521‑M2/73‑150 (MQ=255) CCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCt < 1:4945402‑M1/150‑1 (MQ=255) cccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCt > 1:4611496‑M2/72‑150 (MQ=255) cccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCt > 1:5359126‑M2/72‑150 (MQ=255) cccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCt > 1:5457935‑M2/72‑150 (MQ=255) CCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCccgcga < 2:171712‑M1/72‑2 (MQ=255) CCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCccgcga > 1:171712‑M1/1‑71 (MQ=255) ccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt > 2:4772942‑M2/71‑150 (MQ=255) ccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt > 2:3394455‑M2/71‑150 (MQ=255) ccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt > 2:7459554‑M2/71‑150 (MQ=255) ccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcA‑CAGGCAACACATCAGCTCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt > 1:3449033‑M2/71‑150 (MQ=255) ccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcA‑CAGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt > 1:640357‑M2/71‑150 (MQ=255) CGCTCCTCCGCCGGCGGTGGTACCGGCGAAATCCCCTTTAGCAGCGGTTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTc > 2:7988440‑M1/1‑150 (MQ=255) cgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTc > 2:1502366‑M2/70‑150 (MQ=255) CTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCt > 1:3601440‑M1/1‑150 (MQ=255) TCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTg < 2:7440943‑M1/150‑1 (MQ=255) tcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTg > 1:3518841‑M2/67‑150 (MQ=255) TACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCAt < 2:6153900‑M1/150‑1 (MQ=255) TACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCAt < 1:7420967‑M1/150‑1 (MQ=255) ggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGc < 2:5457935‑M2/91‑1 (MQ=255) ggattgcgccgttccctcggcatgcgtaggagcgggtttacccgcgaagaggccagcG‑CCGGCAACAAAAAAGAGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTACTGCATACGATg > 2:1984555‑M2/58‑150 (MQ=255) gCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGc > 1:7416353/1‑150 (MQ=255) gAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCAtt > 1:3246849/1‑150 (MQ=255) gAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTGTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCAtt > 1:3246686/1‑150 (MQ=255) cccGGCGCACGCCCCTGTCGGCGGGGGTTACCCC‑GCTACGCGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGGAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTg < 2:3486424/148‑1 (MQ=255) cGGCGCACCCCCCTGTCGGAGCGGGTTTACCC‑GCGATGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgcg < 2:7067344/150‑1 (MQ=255) cGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgcg > 2:9022416/1‑150 (MQ=255) cGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgcg > 2:826450/1‑150 (MQ=255) ggCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgcgc > 2:6609329/1‑150 (MQ=255) gcgcAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGcgcg > 1:4056362/1‑150 (MQ=255) gcAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCGGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTa < 2:6609967/150‑1 (MQ=255) gcAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCGGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTa > 1:6609967/1‑150 (MQ=255) aaTCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACa > 1:7635142/1‑150 (MQ=255) tCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAgg > 1:1622187/1‑150 (MQ=255) gcctgcgtaggagcgggtttacccgcgaagaggcccgcA‑CAGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAgg < 2:2895441‑M2/112‑1 (MQ=255) cccTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGc > 2:4291302/1‑150 (MQ=255) ccTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCg > 1:3656191/1‑150 (MQ=255) tgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCg > 1:838019‑M2/36‑150 (MQ=255) cTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCTTACAGGGCGt > 2:4239191/1‑150 (MQ=255) cTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGt > 2:2964741/1‑150 (MQ=255) tGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAATATAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTAGTGCACAGTAGGCGCTTCTCCCGCTTCGTGCATACGCTGCATTTCTTGCGCGTACTGGGCGTc > 2:9165848/1‑150 (MQ=39) tGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTc < 1:9165848/150‑1 (MQ=255) cggtgcggttttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGaa < 2:2703355‑M2/120‑1 (MQ=255) ttcgcgggtaaacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAg > 2:7255617‑M2/30‑150 (MQ=255) gagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGt < 2:2170047‑M2/122‑1 (MQ=255) gagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGt > 2:325780‑M2/29‑150 (MQ=255) gcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgc < 1:7951484‑M2/103‑1 (MQ=255) gcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTg > 1:765730‑M2/27‑150 (MQ=255) cgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATGTCTTGCGCGTACAGGGCGTCGAAGTTGa > 2:6202979‑M2/26‑150 (MQ=255) gtgtttccccgctaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGAc < 2:7118904‑M2/126‑1 (MQ=255) gggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGAc > 1:75089‑M2/25‑150 (MQ=255) ggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGAcc < 2:3865475‑M2/127‑1 (MQ=255) tacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCg > 1:7947191‑M2/20‑150 (MQ=255) ccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACa > 1:1459805‑M2/17‑150 (MQ=255) ccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACa > 1:2748975‑M2/17‑150 (MQ=255) ccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACa > 2:8798520‑M2/17‑150 (MQ=255) ccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACa > 1:7691766‑M2/17‑150 (MQ=255) ccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACa > 2:2725713‑M2/17‑150 (MQ=255) ggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAgcg > 1:4487758‑M2/8‑150 (MQ=255) gcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTCGGCGCTTCACCCGCTTCCTGCATCCGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAgcgc > 2:2648112‑M2/7‑150 (MQ=255) gcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAgcgc > 1:923255‑M2/7‑150 (MQ=255) cccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGcc < 2:1100919‑M2/145‑1 (MQ=255) cccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGcc < 1:1037660‑M2/145‑1 (MQ=255) ccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCg < 2:1955480‑M2/146‑1 (MQ=255) ccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCg < 2:6159007‑M2/146‑1 (MQ=255) ccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCg > 2:8696851‑M2/5‑150 (MQ=255) ccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCg > 2:8697019‑M2/5‑150 (MQ=255) ccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCg > 2:3778524‑M2/5‑150 (MQ=255) cgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCgg > 2:4334256‑M2/4‑150 (MQ=255) g‑cCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGgaa < 1:3032689/150‑1 (MQ=255) g‑cCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCAGCAGTAATTACTGCACAGTAGGCGCGTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGgaa < 2:8538037/150‑1 (MQ=255) | GGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGGAA > NC_002947/5761327‑5761623 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |