| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,761,476 | C→A | 5.2% | intergenic (+107/+49) | trmL → / ← secB | tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,761,476 | 0 | C | A | 5.2% | 512.6 / 13.2 | 153 | intergenic (+107/+49) | trmL/secB | tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB |
| Reads supporting (aligned to +/- strand): ref base C (89/56); new base A (6/2); total (95/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
GGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGGAACG > NC_002947/5761327‑5761625 | ggTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTTAACCC‑CCGCCGACGCAGGCCGAGGGAACGGCGCAATCCCCGGTAGGAGCGGGGTTACCC‑GCGAAGAGGCCCCCG‑cc > 1:6051579/1‑150 (MQ=255) ggggcggcAGACGGGGTTGGCCGGGCGCTGGGGGGTCCCGTGGGGGGGCCGCTCCGCGGGTACCCCC‑GCGCCCCCCCCGCCGGCGGCACGGGCCCACCCCCGTGTCGGAG‑GGGTTTCCCCGGCGAAGAGGCCCGCG‑CCGGCAACaaaaaa < 2:8603004/148‑1 (MQ=255) gTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCC‑GCTCCTACCCAGGCCGAGGGAACGGCGCAAACCCCGGTAGGAGCGGGGTTAACC‑GCGAAGAGGCCCGCG‑CCGGCAACaaaaaa > 2:681138/1‑150 (MQ=39) gTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAAACC‑CCACCGACGCAGGCCGAGGGCACCGCGCAAACCCCGGTAGGAGCGGGTTTAACC‑CCGAAGAGGCCCGCG‑CCCGCAACaaaaaa > 2:1037660/1‑150 (MQ=255) ggcAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCC‑CCTCCAACGCAGGGCGAGGGAACGGCGCCAACCCCGGGAGGAGCCGGGTTACCC‑GCGAAGATGCCCCCGCCCGCCAACaaaaaccggc > 2:6281298/1‑145 (MQ=255) tGCCGTGTGCTGTTGTGTTGCCTGTGCGGGCCTCTTCGCGGTTAAACCC‑GCACCTACGCAGGCCTCGGTAACGGCGCAATCCCCTGTAGGAGCGGTTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCtt < 2:1406145/150‑1 (MQ=255) gggTGCTGAGGTGTGGCCGGTGCGGGCCTCTTCGCGGGTAAACCC‑GCTCCTCCGCCGGCCGCGGGAACGGCGCAATCCCCTGTAGGAGGGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAGAAAGCGCCTCTCGGGGCGCtttttt < 2:5940059/150‑1 (MQ=25) cggtcttgtgGTGCCGGTGCGGGCCCCGGCGGGGTAAAACCC‑GCCCCTCCGCGGGCCGAGGGAACGGCCAACCCCCCGGGCGGAGGGTGTTTACCC‑GCGAAGCGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGaa < 2:7330793/144‑1 (MQ=255) gtgtTGCCTGTGCGGGCCTCTTGGCGGGTAAACCC‑GCTCCTACGCAGGCCGTGGGAAGGGCGCAATCCCCTGTCGGCGGGGTTTTACCC‑GCGAATAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCa < 2:665795/150‑1 (MQ=38) gCCTCTTCGCGGGTAAAACC‑CCTCCGACGCAGGCCGAGGGAACGGCGCAATCCCCCGTAGGAGCGGGGTTACCC‑GCGTATAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGCGAGGCGCGGTCTTGTAACCGGCCGGGAGTACTGCACAg > 2:6523372/1‑150 (MQ=255) CCTCTTCGCGGGTAAACCC‑GCGCCGACGCAGGCCGAGGGAACGGCGCAATCCCCGGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCCGTAATTACAGCACAGt < 2:1431086‑M1/150‑1 (MQ=255) TCTTCGCGGGTAAACCC‑GCTCCGACGCAGGCCGAGGGAACGGCGCAATCCCCGGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAg < 2:5596858‑M1/150‑1 (MQ=255) ttCGCGGGTAAACCC‑GCTCCTACCCAGGCCGCGGGACCGGCGCAAACCCCGGGAGGAGCGGGTTTACCC‑CCGAAGAGGCCCGCG‑CCGGCACCAAAAAAGCGCCCCGCGAGGCGCGGTCGGGAAACCGGCCGGCATTACAGcaccctcggc > 2:6145138/1‑143 (MQ=255) TTCGCGGGTAATCCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGGAACATATAAGCGGCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGgc < 2:5311626‑M1/150‑1 (MQ=255) TTCGCGGGTAAACCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGgc < 2:1452016‑M1/150‑1 (MQ=255) TTCGCGGGTAAACCC‑GCTCCTAAGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTTCCC‑GCGAAGAGGCCCGCG‑CCGGCAACCAAAAAGCGCCCCGCGAGGCGCTTTCTTGAAACCCGCAGGAAGTACTGCACAGTAGgc < 2:5630269‑M1/150‑1 (MQ=255) ttgggggTTAACCCGGATCATACCCTGGCGGTGGTAAGGGCTCAATCCCCTTTTGGTGGGGTTTTACCC‑GCTATGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGgc < 2:1718058/146‑1 (MQ=255) gaGCGGGTTTACCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGgcg < 1:2874868‑M1/148‑1 (MQ=255) GCGGGTAAACCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCt < 2:1124316‑M1/150‑1 (MQ=255) CGGGTAAACCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCtt < 2:3601440‑M1/150‑1 (MQ=255) gcgggtaaacccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCt > 2:879081‑M2/81‑150 (MQ=255) GTAAACCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGcaca < 1:6213185‑M1/137‑1 (MQ=255) GTAAACCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGcaca > 2:6213219‑M1/1‑137 (MQ=255) TAAACCC‑GCTCCTACGCTGGCCGAGGGAACGGCGCAATCCCGTGTTGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCAcc > 2:9085741‑M1/1‑150 (MQ=255) TAAACCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCAcc < 2:8397474‑M1/150‑1 (MQ=255) AAACCC‑GCTCCTAAGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTAACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCAccc < 2:5041831‑M1/150‑1 (MQ=255) ACCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGc < 1:2182868‑M1/150‑1 (MQ=255) CCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCt < 1:8196870‑M1/150‑1 (MQ=255) CCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCt < 1:4945402‑M1/150‑1 (MQ=255) CC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt < 2:6187881‑M1/150‑1 (MQ=255) CC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt < 2:2812214‑M1/150‑1 (MQ=255) CC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAAACGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt < 1:7651454‑M1/150‑1 (MQ=255) cccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCt > 1:5457935‑M2/72‑150 (MQ=255) cccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCt > 1:4611496‑M2/72‑150 (MQ=255) C‑GCTCCTCCGCCGGCGGTGGTACCGGCGAAATCCCCTTTAGCAGCGGTTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTc > 2:7988440‑M1/1‑150 (MQ=255) ccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt > 2:7459554‑M2/71‑150 (MQ=255) ccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcA‑CAGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt > 1:640357‑M2/71‑150 (MQ=255) ccgctcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcA‑CAGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt > 1:640463‑M2/71‑150 (MQ=255) tcctacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTg > 1:3518841‑M2/67‑150 (MQ=255) tacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGc > 2:269558‑M2/64‑141 (MQ=255) tacaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGc < 1:269558‑M2/78‑1 (MQ=255) aggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcA‑CAGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACg > 1:5981626‑M2/61‑150 (MQ=255) ggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGc < 2:5457935‑M2/91‑1 (MQ=255) ggattgcgccgttccctcggcatgcgtaggagcgggtttacccgcgaagaggccagcG‑CCGGCAACAAAAAAGAGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTACTGCATACGATg > 2:1984555‑M2/58‑150 (MQ=255) gCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGc > 1:7416547/1‑150 (MQ=255) gCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGc > 1:7416353/1‑150 (MQ=255) gCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGc > 1:5075274/1‑150 (MQ=255) cGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGACGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCAt > 2:4723182/1‑150 (MQ=255) gAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCAtt > 1:3246849/1‑150 (MQ=255) gggAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATCCGCTGCATTTc > 2:6574663/1‑150 (MQ=255) cccGGCGCACGCCCCTGTCGGCGGGGGTTACCCC‑GCTACGCGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGGAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTg < 2:3486424/148‑1 (MQ=255) cGGCGCACCCCCCTGTCGGAGCGGGTTTACCC‑GCGATGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgcg < 2:7067344/150‑1 (MQ=255) cGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgcg > 2:9022416/1‑150 (MQ=255) cGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgcg > 2:826450/1‑150 (MQ=255) cGGCGAAACCCCCTGTTGGAGGGGTTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgcg < 2:2448818/150‑1 (MQ=255) gcgcAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGcgcg > 1:4056362/1‑150 (MQ=255) gcAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCGGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTa < 2:6609967/150‑1 (MQ=255) tCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAgg > 1:1622187/1‑150 (MQ=255) tCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAgg > 1:2170047/1‑150 (MQ=255) cccTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGc > 2:4291302/1‑150 (MQ=255) ccTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCg > 1:3656191/1‑150 (MQ=255) ccTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCg > 1:5520006/1‑150 (MQ=255) cTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGt > 2:2964741/1‑150 (MQ=255) tGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAATATAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTAGTGCACAGTAGGCGCTTCTCCCGCTTCGTGCATACGCTGCATTTCTTGCGCGTACTGGGCGTc > 2:9165848/1‑150 (MQ=39) tGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTc < 1:9165848/150‑1 (MQ=255) gtaggagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGtcgtcg > 2:1091145‑M2/33‑150 (MQ=255) ttcgcgggtaaacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAg > 2:7255617‑M2/30‑150 (MQ=255) ttcgcgggtaaacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAg > 2:3276183‑M2/30‑150 (MQ=255) gagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGt < 2:2170047‑M2/122‑1 (MQ=255) gagcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGt > 2:325780‑M2/29‑150 (MQ=255) gcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgc < 1:7951484‑M2/103‑1 (MQ=255) gcgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTg > 1:4184316‑M2/27‑150 (MQ=255) cgggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATGTCTTGCGCGTACAGGGCGTCGAAGTTGa > 2:6202979‑M2/26‑150 (MQ=255) gtgtttccccgctaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGAc < 2:7118904‑M2/126‑1 (MQ=255) ggtttcccccgcgaagcggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGAc < 1:8926294‑M2/126‑1 (MQ=255) gggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGAc > 1:75089‑M2/25‑150 (MQ=255) ggtttacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGAcc < 2:3865475‑M2/127‑1 (MQ=255) tacccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACCGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCg > 1:3331521‑M2/20‑150 (MQ=255) ccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACa > 1:1459805‑M2/17‑150 (MQ=255) ccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACa > 2:8798520‑M2/17‑150 (MQ=255) ccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACa > 1:7691766‑M2/17‑150 (MQ=255) ccgcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACa > 2:2725713‑M2/17‑150 (MQ=255) gcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGTAACCGGCCGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGc > 1:7863385‑M2/15‑150 (MQ=255) gcgaagaggcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGc > 1:4648422‑M2/15‑150 (MQ=255) gcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTCGGCGCTTCACCCGCTTCCTGCATCCGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAgcgc > 2:2648112‑M2/7‑150 (MQ=255) gcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAgcgc > 1:922987‑M2/7‑150 (MQ=255) gcccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAgcgc > 1:3535312‑M2/7‑150 (MQ=255) cccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGcc < 1:1037660‑M2/145‑1 (MQ=255) ccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCg > 2:1193887‑M2/5‑150 (MQ=255) ccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCg < 2:6159007‑M2/146‑1 (MQ=255) ccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCg > 2:8697019‑M2/5‑150 (MQ=255) ccgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCg > 2:8696765‑M2/5‑150 (MQ=255) cgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCgg < 1:7440943‑M2/147‑1 (MQ=255) cgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCgg < 2:4184316‑M2/147‑1 (MQ=255) cgcG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCgg > 2:4334256‑M2/4‑150 (MQ=255) g‑cCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGgaa < 1:3175240/150‑1 (MQ=255) g‑cCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGgaa < 1:3032689/150‑1 (MQ=255) g‑cCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCAGCAGTAATTACTGCACAGTAGGCGCGTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGgaa < 2:8538037/150‑1 (MQ=255) cGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGgaacg > 1:48462/1‑150 (MQ=255) cGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGgaacg > 2:1878792/1‑150 (MQ=255) | GGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCC‑GCGAAGAGGCCCGCG‑CCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCGGGAACG > NC_002947/5761327‑5761625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |