| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,120 | C→G | 6.5% | intergenic (+90/‑198) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,120 | 0 | C | G | 6.5% | 551.1 / 3.3 | 184 | intergenic (+90/‑198) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (94/74); new base G (4/11); total (99/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.36e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 190 total aligned reads displayed.
GCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTT > NC_002947/444971‑445269 | gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTc < 2:7992943/150‑1 (MQ=255)gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATc < 2:6678256/150‑1 (MQ=25) cAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCg < 2:3693461/150‑1 (MQ=255) aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCggg < 2:5695189/150‑1 (MQ=255) aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCggg < 2:1108682/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGc < 1:7717578/150‑1 (MQ=255) gtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCtt > 2:8354663/1‑150 (MQ=255) tcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTGCCCCCG‑AAAGCGTCCGGGCGGACAACAAATATT‑TGTGGTGGGGccgcgtc > 1:6800816/1‑145 (MQ=255) aaGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTTCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTcgc < 1:7924046/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCTCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTcgcgt < 2:2562934/150‑2 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCgg < 2:3904066/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 1:4546444/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 1:7031647/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 1:2370291/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 2:3488369/150‑1 (MQ=18) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCggg < 1:5705929/150‑1 (MQ=18) aTCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCa < 2:7224138/150‑1 (MQ=255) cgacgaAATGCTTGGCCGGATCTTCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGc < 1:41504/150‑1 (MQ=255) aTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCgg > 1:4954651/1‑125 (MQ=255) aTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCgg < 2:4954651/125‑1 (MQ=255) tGGCCGGACCATCGACACCTACGCCTGAATCCTGGCTTCATCCCCTATTTCCGCGCCGGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGACCGATCAGACAACAATTTTG‑TGTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACaa < 2:7632886/150‑1 (MQ=37) acatcGACACCTACGCCTCAATACTTGCGACATCCCCTATCCCCGCGCCGGCCTGGTCGGAGCGGGCTTGCCCGCG‑ACTGCGCCCGATCACACAACAATTTTG‑TCTGGTGGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgt < 2:3768562/149‑1 (MQ=37) catcGACACCTCCGCCTTAATACTTGCGACATCCCCTATTTCAGCGCCTGCATTGTAGCTGCGGGCTTGCCCGCG‑AATGCGACCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgtg < 2:8205146/150‑1 (MQ=38) acacCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGc < 2:286698/108‑1 (MQ=255) cacCTCCGCGTTATTCCTGGCGTCAGCCCCTTTTCCCGCGCCTGCCTTGTCGGCGGGGGCTGGCCCGCT‑ACTGCGCCCGAACACAAAAAAATTTGG‑TCTGGGCGGGCCACTGCGGGGGAACGCCCGCTCCTACAAGGGTTTGtggcatgg < 2:8073700/150‑1 (MQ=255) gAATACTTGCGACAGCCCCTTTTTCCGCGCCGGCCTTGTAGGTGGGGGCTTGCCCGCG‑ACTGCGTCCTAACAGACAACAATTTGG‑TCTGGTCGGGCCTGTTCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAtt < 2:6640801/150‑1 (MQ=255) atgcggggCGTCACCCCCTATGCCCGGCCCGGCGTTGTCGGCGGGGGGTGCCCCGCG‑ACGGCGCCCTCTCACACAACACTTGTG‑TGTGGCGGGGCCGCGGGGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 2:7900112/143‑1 (MQ=255) cccccAATTCCCGCGCGGGCCTTGTAGGCGGGGGCTTGCCCGCG‑ATTGCTGCCGAACCCCAAACATTGTTG‑TGTGGTCGGGCCTCTCCGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTg < 2:8689215/149‑1 (MQ=255) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAATTTG‑TCTGGTCGGGCCTCGTAGCGGGCAATCCCGCTCCTACAAGGGTTTGTTGCATGGCATGACTGATTTGCCAATTTTCGTTGCg > 2:9155378/1‑150 (MQ=38) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCATTCCCGCG‑AAAGCCTACCATAAGACAACAATTATG‑TCTGGTCGGGCCGCTTCGCCGGCAAGACCCCACCGACAAGGGTTTTTGGCAAGGCATGACTGATTTTCCAATTTTCGTGGCg > 2:7524415/1‑150 (MQ=255) ttCCGCGCCGGCCTTGTCGGCGGGGGCTGCCCCGCC‑ACTGCGCCCGAACACACAA‑AATTTTGTTCGGGTCGGGCCTCTCCGGGGCCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAAt < 2:3296616/150‑1 (MQ=255) gcctttgttgGCGCGGGCGGCCCCGCG‑ACTGCGTCCCAACCAACACCATTTTGG‑GGTGGTGGGGCCTCCCCGCGGGCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 1:7537879/146‑1 (MQ=255) tggAGCGGGGTTGCCCGCT‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCATGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:6740798/149‑1 (MQ=255) tggAGCGGGCTTGCGCTCT‑AAGGCTTCCTCTCCTCAAACATTTTGG‑TCGGGGGGGGCCTCTTGGCGGGAATGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:1968839/149‑1 (MQ=255) aggaggGGGCTTGCCCGCG‑ACTGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:2124509/150‑1 (MQ=255) gAGCGGGCTTGCCCGCT‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTCCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 2:4564600/150‑1 (MQ=255) gcgggggTTGCCCGGGTATTGCGTCCTATCACACAAAATTTTTG‑TGGGGCGGGGCCTCTGCGCGGCCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 1:2986595/147‑1 (MQ=255) aGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTACCTCCTTg > 2:5885032/1‑150 (MQ=255) gCGGGCTTGCCCGCG‑AAAGCGTCCGAACAGACAACAATTTTG‑TCTGGGCGGGCCTCTACGCGGGCAAGCCCCCTCCTACAAGGGGTTGTGGCATGGCATGACTGATTTGCCAATTTTCGTGGCGTAAATGGCACCAAAGTCCATACTTGa > 1:8819618/1‑150 (MQ=255) gCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGa > 2:694331/1‑150 (MQ=255) ttGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:7281357/1‑150 (MQ=255) cccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:8784295/1‑150 (MQ=255) cccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:7230839/1‑150 (MQ=255) cccGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:2994741/1‑150 (MQ=18) cccGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:5512363/1‑150 (MQ=18) ccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACaa < 1:7185886/71‑1 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACaa > 2:7185886/1‑71 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGTCGTAAAt > 2:7172161/1‑119 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:6175340/1‑150 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:6503236/1‑150 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:3094776/1‑150 (MQ=255) cgcg‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:1368129/1‑150 (MQ=255) g‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCt > 2:1437650/1‑150 (MQ=255) agaggcccGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 1:9042438/7‑150 (MQ=21) gTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 2:1601660/1‑146 (MQ=255) gTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 2:400243/1‑150 (MQ=255) gTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 1:1923021/1‑150 (MQ=255) tCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 1:7493975/1‑150 (MQ=255) tCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 2:9122252/1‑150 (MQ=255) ccGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa < 1:1263837/139‑1 (MQ=255) ccGACCAGACAAAATTGTTG‑TCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt > 2:7055818/1‑86 (MQ=18) ccGACCAGACAAAATTGTTG‑TCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 1:7055818/86‑1 (MQ=18) cGACCAGACAAAATTGTTG‑TCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAg > 1:7225067/1‑150 (MQ=38) aTCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 1:5121193/1‑150 (MQ=255) aTCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 1:6246004/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 2:979310/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 1:1677932/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 1:6678504/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 2:6478689/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcat < 2:4220457/62‑1 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAtaca > 1:3635340/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:5587028/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:7732837/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:511333/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAAAGTAAGTTTCAaaca > 1:6986146/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTAGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:7671976/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGAAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:7672240/1‑150 (MQ=255) aaaattgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:1189921/8‑150 (MQ=37) aaaattgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:4642264/8‑150 (MQ=37) acaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAATCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGTCGGAATGCTGAGCTAAAGGTAAGTTTCaatctc > 1:8122393/1‑146 (MQ=255) aaatttttG‑TAGGGTCGGGCCTCCCCGGGGCCAACCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGATAGCTGAGCTAAACGTAAGTTTCAaacaa < 1:3649191/146‑1 (MQ=255) aattgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 2:8556896/6‑150 (MQ=38) attgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 1:2539654/5‑150 (MQ=38) aaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 1:8377065/1‑150 (MQ=255) aaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 2:8170980/1‑150 (MQ=255) aaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGATGAGCTAAACGTAAGTTTCAAACAACt > 1:7083362/1‑150 (MQ=255) ttttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGt > 2:20738/1‑150 (MQ=255) ttttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACGGt > 2:7853607/1‑150 (MQ=255) tttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGtt > 1:1407600/1‑150 (MQ=255) tttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGtt < 1:979310/150‑1 (MQ=255) ttgg‑tcgggtcggGCCTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGtt < 2:5074692/147‑1 (MQ=255) cTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATc > 2:345749/1‑150 (MQ=255) cTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATc > 1:8031584/1‑150 (MQ=255) cTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTATCAAACAGTTGTTTGaaa < 2:6706467/150‑3 (MQ=255) tGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCg > 1:4381200/1‑150 (MQ=255) gTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 1:3131552/1‑150 (MQ=255) gTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAAATGTTTGATCGGc > 1:8459563/1‑150 (MQ=255) tCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 2:4840708/1‑149 (MQ=255) tCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc < 1:4840708/149‑1 (MQ=255) tCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCt > 1:1291141/1‑150 (MQ=255) | GCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTT > NC_002947/444971‑445269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |