| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,123 | G→A | 13.6% | intergenic (+93/‑195) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,123 | 0 | G | A | 13.6% | 454.6 / 50.9 | 176 | intergenic (+93/‑195) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (89/62); new base A (10/13); total (99/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.86e-01 | |||||||||||
Only 100 of 183 total aligned reads displayed.
AAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCG > NC_002947/444974‑445272 | aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCggg < 2:5695189/150‑1 (MQ=255)aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCggg < 2:1108682/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGc < 1:8444266/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGc < 1:7717578/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGc < 1:7269408/150‑1 (MQ=255) gtcgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCct < 2:2989247/150‑1 (MQ=255) gtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCtt > 2:8354663/1‑150 (MQ=255) gtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCtt < 2:7671043/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCTCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTcgcgt < 2:2562934/150‑2 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCgg < 2:7180481/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 2:3488369/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 1:7031319/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 1:4546502/150‑1 (MQ=18) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCggg < 2:4886023/150‑1 (MQ=255) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCggg < 1:5705929/150‑1 (MQ=18) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCaa < 1:750664/150‑1 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCGGGCAAGc < 1:7711284/150‑1 (MQ=17) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCGGGCAAGc < 1:3619271/150‑1 (MQ=17) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGcc < 2:7059876/150‑1 (MQ=255) catcGACACCTACGCCTGAATACTTGCGTCATCCCCTCTTTCAGCGCCTGCCTTGTAGTCGCGGGCTTGCCCGCGAATGCGTCGGACCACACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGATtgtg < 2:8205472/150‑1 (MQ=38) tcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCCCGCAAGCGGCCCCTCAGACAACAAAGTTT‑GCGGGGCGGGCCGCGTCGCGGGCCACCCCCCGCCAACAACGGGGTGtggc > 2:3748259/1‑150 (MQ=255) gACACCACCGCGTTAATAGTTGGGACAGCCCCTATTCCCGCGCGGGCTTTGTAGGCGGGGGGTGGCCGGCTATGGGGCCCGATCACACAAAAATTTGG‑TGGGGTGGGGCCTCTGCGGGGCCACCCCCGCTCCTACAAGGGTTTGtggcat < 2:8730419/150‑1 (MQ=255) acacCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGc > 1:286698/1‑108 (MQ=255) cacCTCCGCGTTATTCCTGGCGTCAGCCCCTTTTCCCGCGCCTGCCTTGTCGGCGGGGGCTGGCCCGCTACTGCGCCCGAACACAAAAAAATTTGG‑TCTGGGCGGGCCACTGCGGGGGAACGCCCGCTCCTACAAGGGTTTGtggcatgg < 2:8073700/150‑1 (MQ=255) ccTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTTCCCCCCAATGCGTCCCCTCAGACAAAAAATTTT‑TGTTGTGGGGCCGCGTCGCGGGCAACCCCCCGCCAAAAAGGGGTTTTTGGAAGGCATTAcag > 2:7209568/1‑148 (MQ=255) gAATACTTGCGACAGCCCCTTTTTCCGCGCCGGCCTTGTAGGTGGGGGCTTGCCCGCGACTGCGTCCTAACAGACAACAATTTGG‑TCTGGTCGGGCCTGTTCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAtt < 2:6640801/150‑1 (MQ=255) atgcggggCGTCACCCCCTATGCCCGGCCCGGCGTTGTCGGCGGGGGGTGCCCCGCGACGGCGCCCTCTCACACAACACTTGTG‑TGTGGCGGGGCCGCGGGGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 2:7900112/143‑1 (MQ=255) aaTACTGGCTACACCCCCTTTTTCCGCGCCTCCTTTGTTGGCGGGGGCTGGCCCGCGATTCCGCCCGACCACAAAAAATTTTTG‑TGTGGGGGGGCCTGTCCGGGGGCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 2:3849656/150‑1 (MQ=255) tCATCCCCTATTCCCGCGCCTGCCTTGTCGGAGCGGGCTTGCCCGCGAATGCGTCCGCTCAGAAAACAATTTTG‑TGTGGTCGGGCCTCTGCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTc < 2:7551977/150‑1 (MQ=255) aTCCCCTATTCCCGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGACTGCGTCCGATCAGACACCAATTTTG‑TGTGGTCGGGCCTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGt < 2:8194288/150‑1 (MQ=38) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAATTTG‑TCTGGTCGGGCCTCGTAGCGGGCAATCCCGCTCCTACAAGGGTTTGTTGCATGGCATGACTGATTTGCCAATTTTCGTTGCg > 2:9155378/1‑150 (MQ=38) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCCCGAATGCGGACGCTCCCACAACAAATTTT‑TGTGGGGGGGCCTCGTCGCGGGCCAGCCCCCTCCCACAAAGGGGTGTGGGCTGGCATGTCTGAATTGCCAATTTTCCTGGCg > 2:3649191/1‑150 (MQ=255) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCATTCCCGCGAAAGCCTACCATAAGACAACAATTATG‑TCTGGTCGGGCCGCTTCGCCGGCAAGACCCCACCGACAAGGGTTTTTGGCAAGGCATGACTGATTTTCCAATTTTCGTGGCg > 2:7524415/1‑150 (MQ=255) ttcccgcgcCTGCCTTTTCGGGGCGGGCGGCCCGGCTACTGCGCCCCCCCCCACACCAAGTGTG‑TCGGGTGGGCCCTCGACGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTaaa < 2:1922313/145‑1 (MQ=255) ttCCGCGCCGGCCTTGTCGGCGGGGGCTGCCCCGCCACTGCGCCCGAACACACAA‑AATTTTGTTCGGGTCGGGCCTCTCCGGGGCCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAAt < 2:3296616/150‑1 (MQ=255) tgcttTGTCGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGAAAACATTTTGG‑TCTGGTCGGGCCTCTTTGCGGGAAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 1:2474849/150‑1 (MQ=255) tggAGCGGGGTTGCCCGCTAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCATGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:6740798/149‑1 (MQ=255) aggaggGGGCTTGCCCGCGACTGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:2124509/150‑1 (MQ=255) gcgggggCTGGCCCGCCACTGCGCCCCACCACACAACAATTGTG‑TGGGGGCGGCCCTCTCCGCGGGCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 1:6742231/146‑1 (MQ=255) gAGCGGGCTTGCCCGCTAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTCCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 2:4564600/150‑1 (MQ=255) aGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTACCTCCTTg > 2:5885032/1‑150 (MQ=255) gCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTT‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTTCCATTTTTCGTGGCGTAAATTGCACCATAGTCCATCATTGa > 1:7998886/1‑150 (MQ=255) gCGGGCTTGCCCGCGAAAGCGTCCGAACAGACAACAATTTTG‑TCTGGGCGGGCCTCTACGCGGGCAAGCCCCCTCCTACAAGGGGTTGTGGCATGGCATGACTGATTTGCCAATTTTCGTGGCGTAAATGGCACCAAAGTCCATACTTGa > 1:8819618/1‑150 (MQ=255) gggCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa > 1:4081580/1‑150 (MQ=255) gCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGa > 2:694331/1‑150 (MQ=255) ttGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:7281445/1‑150 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:7230839/1‑150 (MQ=255) cccGCGAAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:5512363/1‑150 (MQ=18) ccGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGGGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:4993116/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACaa < 1:7185886/71‑1 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:6503236/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:6504071/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:444634/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:1368129/1‑150 (MQ=255) gAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCt > 2:1437650/1‑150 (MQ=255) agaggcccGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 1:9042438/7‑150 (MQ=21) gTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 2:1601660/1‑146 (MQ=255) gTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 1:1923021/1‑150 (MQ=255) gTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 2:400243/1‑150 (MQ=255) ccGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa < 1:1263837/139‑1 (MQ=255) ccGACCAGACAAAATTGTTG‑TCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt > 2:7055673/1‑86 (MQ=18) ccGACCAGACAAAATTGTTG‑TCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 1:7055673/86‑1 (MQ=18) gATCAGACAACAATTTTG‑TCTGGTCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt > 2:300651/1‑150 (MQ=255) aTCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 1:6246004/1‑150 (MQ=255) aTCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 1:5121193/1‑150 (MQ=255) accacaacaTTTTGG‑TCTGGGCGCGCCACTCCGGGGCCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTc < 1:6807959/147‑1 (MQ=255) aGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCa > 2:2677624/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 2:979310/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 2:6478689/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 2:4821116/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 1:1677932/1‑150 (MQ=255) gACAAAATTGTTG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa < 1:2994741/150‑1 (MQ=37) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcat < 2:4220457/62‑1 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcat > 1:4220457/1‑62 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:7732837/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:511333/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:5587028/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGAAAGTTTCAaaca > 2:7671977/1‑150 (MQ=255) aaaattgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:1189921/8‑150 (MQ=37) acatTTTGG‑TGTGGTGGGGCCTCTGCGCGGGAACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaa < 1:8139219/150‑1 (MQ=255) acaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaa > 1:808252/1‑150 (MQ=255) aaatttttG‑TAGGGTCGGGCCTCCCCGGGGCCAACCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGATAGCTGAGCTAAACGTAAGTTTCAaacaa < 1:3649191/146‑1 (MQ=255) aattgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 1:4694327/6‑150 (MQ=38) aattgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 2:8556896/6‑150 (MQ=38) aaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 1:7083304/1‑150 (MQ=255) aaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGATGAGCTAAACGTAAGTTTCAAACAACt > 1:7083362/1‑150 (MQ=255) aaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCAACCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 2:6075372/1‑150 (MQ=255) aTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTg > 2:9091468/1‑150 (MQ=255) ttttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGt > 2:20738/1‑150 (MQ=255) ttttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACGGt > 2:7853607/1‑150 (MQ=255) tttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGtt < 1:979310/150‑1 (MQ=255) tttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGtt > 1:1407600/1‑150 (MQ=255) ttgg‑tcgggtcggGCCTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGtt < 2:5074692/147‑1 (MQ=255) tCTGGTGGGGCCTCTGCGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGAt < 2:8587860/150‑1 (MQ=255) tCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGAt > 2:7918406/1‑150 (MQ=255) cTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATc > 2:345749/1‑150 (MQ=255) cTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTATCAAACAGTTGTTTGaaa < 2:6706467/150‑3 (MQ=255) tCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCt > 1:1291141/1‑150 (MQ=255) cGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAATCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCtt > 1:2342324/1‑150 (MQ=255) gggCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTc > 2:2051739/1‑150 (MQ=255) | AAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCG > NC_002947/444974‑445272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |