| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,127 | C→A | 13.4% | intergenic (+97/‑191) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,127 | 0 | C | A | 13.4% | 440.5 / 55.7 | 173 | intergenic (+97/‑191) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (93/55); new base A (10/13); total (103/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.93e-01 | |||||||||||
Only 100 of 184 total aligned reads displayed.
CGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCGCCA > NC_002947/444979‑445275 | gtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCtt < 2:7671043/150‑1 (MQ=255) gtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCtt > 2:8354663/1‑150 (MQ=255) aaGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTTCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTcgc < 1:7924046/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCgg < 2:7180481/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCgg < 2:3904066/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 2:3488369/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 1:4546502/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 1:2370291/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCgg < 1:7031647/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACATACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCgg < 2:2055880/150‑1 (MQ=255) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCggg < 1:5705929/150‑1 (MQ=18) cgacgaAATGCTTGGCCGGATCTTCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGc < 1:41504/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGcc < 2:7059876/150‑1 (MQ=255) aaTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTTCCCCCG‑AATGCGGCCGATCAGAAAACAATTTTT‑TGTTGGCGGGGCGCGTCGCGGGCCAGcccccac > 2:5089305/1‑146 (MQ=255) catcGACACCTACGCCTGAATACTTGCGTCATCCCCTCTTTCAGCGCCTGCCTTGTAGTCGCGGGCTTGCCCGCG‑AATGCGTCGGACCACACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGATtgtg < 2:8205472/150‑1 (MQ=38) tcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCCCG‑CAAGCGGCCCCTCAGACAACAAAGTTT‑GCGGGGCGGGCCGCGTCGCGGGCCACCCCCCGCCAACAACGGGGTGtggc > 2:3748259/1‑150 (MQ=255) gACACCACCGCGTTAATAGTTGGGACAGCCCCTATTCCCGCGCGGGCTTTGTAGGCGGGGGGTGGCCGGCT‑ATGGGGCCCGATCACACAAAAATTTGG‑TGGGGTGGGGCCTCTGCGGGGCCACCCCCGCTCCTACAAGGGTTTGtggcat < 2:8730419/150‑1 (MQ=255) cacCTCCGCGTTATTCCTGGCGTCAGCCCCTTTTCCCGCGCCTGCCTTGTCGGCGGGGGCTGGCCCGCT‑ACTGCGCCCGAACACAAAAAAATTTGG‑TCTGGGCGGGCCACTGCGGGGGAACGCCCGCTCCTACAAGGGTTTGtggcatgg < 2:8073700/150‑1 (MQ=255) ccTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTTCCCCCC‑AATGCGTCCCCTCAGACAAAAAATTTT‑TGTTGTGGGGCCGCGTCGCGGGCAACCCCCCGCCAAAAAGGGGTTTTTGGAAGGCATTAcag > 2:7209568/1‑148 (MQ=255) gAATACTTGCGACAGCCCCTTTTTCCGCGCCGGCCTTGTAGGTGGGGGCTTGCCCGCG‑ACTGCGTCCTAACAGACAACAATTTGG‑TCTGGTCGGGCCTGTTCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAtt < 2:6640801/150‑1 (MQ=255) atgcggggCGTCACCCCCTATGCCCGGCCCGGCGTTGTCGGCGGGGGGTGCCCCGCG‑ACGGCGCCCTCTCACACAACACTTGTG‑TGTGGCGGGGCCGCGGGGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 2:7900112/143‑1 (MQ=255) tCATCCCCTATTCCCGCGCCTGCCTTGTCGGAGCGGGCTTGCCCGCG‑AATGCGTCCGCTCAGAAAACAATTTTG‑TGTGGTCGGGCCTCTGCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTc < 2:7551977/150‑1 (MQ=255) aTCCCCTATTCCCGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑ACTGCGTCCGATCAGACACCAATTTTG‑TGTGGTCGGGCCTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGt < 2:8194288/150‑1 (MQ=38) cccccAATTCCCGCGCGGGCCTTGTAGGCGGGGGCTTGCCCGCG‑ATTGCTGCCGAACCCCAAACATTGTTG‑TGTGGTCGGGCCTCTCCGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTg < 2:8689215/149‑1 (MQ=255) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAAATTTG‑TCTGGTCGGGCCTCGTAGCGGGCAATCCCGCTCCTACAAGGGTTTGTTGCATGGCATGACTGATTTGCCAATTTTCGTTGCg > 2:9155378/1‑150 (MQ=38) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCC‑AAATCGTCCCATCAGTCAACAAATTTG‑TCTGGGAGGGCCGCGTGGCGGGCAAGCCCCCTCCGACAAGGGTGTTTGGCAAGGCATGAATGATTTGGCAATTTTAGTGGCg > 2:4554678/1‑150 (MQ=255) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCCCG‑AATGCGGACGCTCCCACAACAAATTTT‑TGTGGGGGGGCCTCGTCGCGGGCCAGCCCCCTCCCACAAAGGGGTGTGGGCTGGCATGTCTGAATTGCCAATTTTCCTGGCg > 2:3649191/1‑150 (MQ=255) ccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCATTCCCGCG‑AAAGCCTACCATAAGACAACAATTATG‑TCTGGTCGGGCCGCTTCGCCGGCAAGACCCCACCGACAAGGGTTTTTGGCAAGGCATGACTGATTTTCCAATTTTCGTGGCg > 2:7524415/1‑150 (MQ=255) ttCCGCGCCGGCCTTGTCGGCGGGGGCTGCCCCGCC‑ACTGCGCCCGAACACACAA‑AATTTTGTTCGGGTCGGGCCTCTCCGGGGCCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAAt < 2:3296616/150‑1 (MQ=255) tgcttTGTCGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGAAAACATTTTGG‑TCTGGTCGGGCCTCTTTGCGGGAAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 1:2474849/150‑1 (MQ=255) gcctttgttgGCGCGGGCGGCCCCGCG‑ACTGCGTCCCAACCAACACCATTTTGG‑GGTGGTGGGGCCTCCCCGCGGGCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 1:7537879/146‑1 (MQ=255) tggAGCGGGGTTGCCCGCT‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCATGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:6740798/149‑1 (MQ=255) tggAGCGGGCTTGCGCTCT‑AAGGCTTCCTCTCCTCAAACATTTTGG‑TCGGGGGGGGCCTCTTGGCGGGAATGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:1968839/149‑1 (MQ=255) gcgggggCTGGCCCGCC‑ACTGCGCCCCACCACACAACAATTGTG‑TGGGGGCGGCCCTCTCCGCGGGCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 1:6742231/146‑1 (MQ=255) gAGCGGGCTTGCCCGCT‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTCCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 2:4564600/150‑1 (MQ=255) gcgggggTTGCCCGGGTATTGCGTCCTATCACACAAAATTTTTG‑TGGGGCGGGGCCTCTGCGCGGCCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 1:2986595/147‑1 (MQ=255) gCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGGTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCCTAGTCCATCCTTgc > 2:5801179/1‑149 (MQ=255) gCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGa > 2:694331/1‑150 (MQ=255) ttGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:7281445/1‑150 (MQ=255) cccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:7230839/1‑150 (MQ=255) cccGCG‑AAGAGGCCCGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:5512363/1‑150 (MQ=18) ccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACaa < 1:7185886/71‑1 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:444634/1‑150 (MQ=255) ccGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:6503236/1‑150 (MQ=255) cgcg‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:1368129/1‑150 (MQ=255) g‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCt > 2:1437650/1‑150 (MQ=255) agaggcccGACCAGACAAAATTGTTG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 1:9042438/7‑150 (MQ=21) gTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 2:1601660/1‑146 (MQ=255) gTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 1:1923021/1‑150 (MQ=255) tCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 1:7493975/1‑150 (MQ=255) ccGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:1263837/1‑139 (MQ=255) ccGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa < 1:1263837/139‑1 (MQ=255) ccGACCAGACAAAATTGTTG‑TCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 1:7055818/86‑1 (MQ=18) ccGACCAGACAAAATTGTTG‑TCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt > 2:7055673/1‑86 (MQ=18) cGACCAGACAAAATTGTTG‑TCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAg > 1:7225067/1‑150 (MQ=38) gATCAGACAACAATTTTG‑TCTGGTCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt > 2:300651/1‑150 (MQ=255) aTCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 1:6246004/1‑150 (MQ=255) aTCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 1:5121193/1‑150 (MQ=255) tCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGttt > 2:4988145/1‑150 (MQ=255) cAGACAAAATTGTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTc > 2:5219736/1‑150 (MQ=255) aGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCa > 2:2677624/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 2:979310/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 2:6478689/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 1:1677932/1‑150 (MQ=255) gACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 1:6678504/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcat > 1:4220457/1‑62 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAtaca > 1:3635340/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:7732837/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:5587028/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGAAAGTTTCAaaca > 2:7671977/1‑150 (MQ=255) aacaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAAAGTAAGTTTCAaaca > 1:6986146/1‑150 (MQ=255) aaaattgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:1189921/8‑150 (MQ=37) aaaattgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:4642264/8‑150 (MQ=37) acatTTTGG‑TGTGGTGGGGCCTCTGCGCGGGAACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaa < 1:8139219/150‑1 (MQ=255) acaaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaa > 1:808252/1‑150 (MQ=255) aattgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 2:4183467/6‑150 (MQ=38) aattgttG‑TCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 2:8556896/6‑150 (MQ=38) aaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGATGAGCTAAACGTAAGTTTCAAACAACt > 1:7083362/1‑150 (MQ=255) aaTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCAACCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 2:6075372/1‑150 (MQ=255) aTTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTg > 2:9091468/1‑150 (MQ=255) ttttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACGGt > 2:7853607/1‑150 (MQ=255) tttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGtt > 1:1407600/1‑150 (MQ=255) tttG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGtt < 1:979310/150‑1 (MQ=255) tCTGGTGGGGCCTCTGCGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGAt < 2:8587860/150‑1 (MQ=255) tCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGAt > 2:7918406/1‑150 (MQ=255) cTGGTCGGGCCTCTTCGGGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATc < 2:2120061/150‑1 (MQ=255) cTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATc > 2:345749/1‑150 (MQ=255) cTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATc > 1:8031584/1‑150 (MQ=255) cTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTATCAAACAGTTGTTTGaaa < 2:6706467/150‑3 (MQ=255) gTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 1:3131552/1‑150 (MQ=255) gTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAAATGTTTGATCGGc > 1:8459563/1‑150 (MQ=255) tCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 2:4840708/1‑149 (MQ=255) tCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc < 1:4840708/149‑1 (MQ=255) tCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCt > 1:1291141/1‑150 (MQ=255) gggCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTc > 2:2561397/1‑150 (MQ=255) accTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCg > 2:2281443/2‑150 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCGcgc > 2:5273713/1‑148 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCGCCa > 1:4009359/1‑150 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCGCCa > 2:378134/1‑150 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCGCCa > 1:5167985/1‑150 (MQ=255) | CGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCG‑AATGCGTCCGATCAGACAACAATTTTG‑TCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCGCCA > NC_002947/444979‑445275 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |