| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,899,760 | G→C | 13.5% | intergenic (‑182/+52) | PP_5172 ← / ← PP_5173 | hypothetical protein/RND family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,899,760 | 0 | G | C | 13.5% | 564.9 / 68.4 | 214 | intergenic (‑182/+52) | PP_5172/PP_5173 | hypothetical protein/RND family transporter |
| Reads supporting (aligned to +/- strand): ref base G (88/93); new base C (7/22); total (99/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.58e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.09e-01 | |||||||||||
Only 100 of 214 total aligned reads displayed.
AGGTTTGAAGGGGTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCA > NC_002947/5899612‑5899908 | ttGAAGGGGTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCa < 1:4603395/150‑1 (MQ=255) gAAGGGGTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATc < 1:574207/150‑1 (MQ=255) aaGGGGTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCg > 2:3138440/1‑150 (MQ=255) ggggTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATcaca > 1:971708/1‑150 (MQ=255) ggggTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCa > 2:8061502/1‑150 (MQ=255) ggggTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCa < 1:2892846/150‑1 (MQ=255) gggTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCCCGAATAAGGTGGTCGATGCACCATCGCAt > 2:3036861/1‑150 (MQ=255) gTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGCGGGGTTTACCCCCCAA‑AAGGTGGTCGCATCACCAGAGCAtta > 1:3030864/1‑149 (MQ=255) tttGCGCCTGTCTTGAGGGCAATAGTAGAGAGGCGTTATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCAATTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTcgc < 2:5111976/150‑1 (MQ=39) tttGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTcgc < 2:8401084/150‑1 (MQ=255) ttGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTcgcg < 2:7014522/150‑1 (MQ=37) ttGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTcgcg < 1:7789583/150‑1 (MQ=37) ttGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTcgcg < 1:1439329/150‑1 (MQ=255) tgtgcCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCgg < 2:3828108/147‑1 (MQ=255) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGTATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCgg < 1:1581254/150‑1 (MQ=25) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCgg < 1:2357530/150‑1 (MQ=25) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCgg < 2:177000/150‑1 (MQ=255) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCgg < 1:5136882/150‑1 (MQ=255) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCgg < 1:4149537/150‑1 (MQ=255) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCgg < 1:6550190/150‑1 (MQ=255) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCCCTGGTAGGAGC‑GGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCgg < 1:5885514/150‑1 (MQ=25) gcCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTAACCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTa > 2:1423786/1‑150 (MQ=255) ggCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGTATTCGCGGGTAAAcc < 1:8947558/150‑1 (MQ=255) gCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAAccc < 2:1825920/150‑1 (MQ=255) ttGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGc < 2:8898291/150‑1 (MQ=25) tgggCAATAGTCTTGAGGCGGTATTATTCTTAAAAATACTGTTTAAGATTTTTTATATAACCATTTAAGAGAACACCCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTcc < 2:7044180/149‑1 (MQ=18) ggCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTAACCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTa > 2:2720996/1‑150 (MQ=255) ggCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAAAACGCCTCTGGTAGGAGC‑GGGTTTAACCCCGAATACCGTGGTGGATGGAACATCGCAGTCGCCGGTAAACCCCCTccaa > 1:7990189/1‑148 (MQ=255) aaTAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACACCCGAATACGGTGGTCGATGCACCAACGCATTCGCGGGTAAACCCGCTCCTACCa > 1:613616/1‑150 (MQ=255) tagtagTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCCCCATCGCATTCGCGGGTAAACCCGCTCCTACCAgg < 2:8214377/150‑1 (MQ=255) tagtagTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAgg < 2:3603024/150‑1 (MQ=255) agtagtGAGGCGGTATTATTCTTAAAAATACTGTTTAAGAATTTTAATATAACCATTTAAGCGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGTTGCACCATCGCATTCGCGGTTAAACCCGCTCCTACCAggg < 2:7682038/150‑1 (MQ=38) agtagtGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTAAACGCGAATACCGTGGTCGATTCACCATAGCAATCGCGGGTAAAACCCCTCCAACCAggg > 1:6317822/1‑150 (MQ=255) gAGGCGGGATTATAAATAAAAATACTCTTAAACAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGCAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGCTAAACCCGCTCCTACCAGGGGCCata < 2:8020514/150‑1 (MQ=38) gCGGTATTTTTCTTAAAAATACTGTTTAATAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCTTTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATgg < 2:6570135/150‑1 (MQ=255) gCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATgg > 1:7628507/1‑150 (MQ=255) atttttCTTAAAATTACGGTTTAAGAATTTTTATATAACCATTTATTTGAACCCGCGTCTTGTTGGAGC‑GGGTTTACCCGCGAATACGTTGGTCGAGGCACCATCGCATTCGCGTGTAAACCCGCTCCTACCAGGGGCCATATGGGCCtt < 2:2421254/150‑1 (MQ=25) ttattCTTAAAAATACTGGTTAAGAATTTTTATAGAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTGTTCCCCCGCCTAAGGTGGTCGAGGCACCCGAGCCTTCGCGGGGGCACCCGCGCCTACCAGCGGCCCGATggggcggc > 1:5055548/1‑145 (MQ=255) ttataCTAAAAAATAATGTTTAATAATTTTTTTATAACCTTTTAAGATAACACGCCTCTGTTTGGAGC‑GGTTTTACCCGCTATTACGGTGTTCGATGCACCATCGCATTCGCGGTAAAACCCGCTCCTACCAGGGGCCATATGGGCCTTc < 2:4629576/150‑1 (MQ=255) tattatTAAAAATACTGTTAAAGATTTTTTATATAACCTTTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCa < 2:1128194/150‑1 (MQ=255) tattCTTAAAAATACTGTTTAATAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGTTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCa < 1:7616149/150‑1 (MQ=255) tCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACCCGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGc < 2:3405783/150‑1 (MQ=255) ttAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCAccgtat < 2:6988321/99‑5 (MQ=255) ttAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCgt > 2:5229843/1‑150 (MQ=255) ttAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCgt > 2:2701404/1‑150 (MQ=255) aTACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATAAGGTGGTCGATGCACCAACGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCCTATGGGCCTTCAGGCGTGTTTCt > 2:8653785/1‑150 (MQ=255) tACTTTTTAACAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTTGGAGC‑GGGTTTACCCGCTAATACGGTGGTCGATGCACCATCGCATTCGCGGTTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTg < 2:845365/150‑1 (MQ=255) tttttACGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTTGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAACCCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCgg < 2:7660381/148‑1 (MQ=255) tttAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTcgc < 1:1070061/94‑1 (MQ=14) tttAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCt > 2:3572037/1‑150 (MQ=255) ttAAGAATTTTTATATAACCATTTAAGAGAACCCGCCTCGGGTAGGAGC‑GGGTTTACCCGCGAATCCGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTc < 2:227951/150‑1 (MQ=255) tgaaGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATAGGGTGGTCGATGCCCCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTc < 2:4791944/148‑1 (MQ=255) tAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAAAAAGGTGGGCGATGCACCATCGCATTAGCGGGTAAACCCGCTCCTACCAGGGGCCATAGGGGCCTTCAGGCGTGTTTCTGCGGCTcg > 1:6081098/1‑150 (MQ=39) tAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTAACCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTATGCGGCTcg > 1:4484190/1‑150 (MQ=255) ataaTTTTTATATAACAATTTAACACAACACGCCTCTGGTAGGAGC‑GGTTTTACCCGCCAATACGGTGGTCGATGAACCATCGCATTCGCGGTTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTcgcg < 2:1589587/148‑1 (MQ=255) aGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTcgcg < 2:514491/150‑1 (MQ=255) ttttATATAACCATTTAAGAGAACGCGCCTCTGGTAGGAGC‑GGGTTTTACCCCGAAAAACGTGGTCGATGCACCAAAGCCTAAGCCGGTAAAACCCCACCAACCAAGGGCCCAAATGGCCATAAGGCCTGTTTTTGCGGCGCGCgggtat > 1:6288230/1‑146 (MQ=255) atataACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTa < 2:4959498/150‑1 (MQ=255) taACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCa < 2:5702608/150‑1 (MQ=255) aaCCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATAAGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCCCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAg > 2:200790/1‑150 (MQ=255) acgagaCCCCGCCTGGGGTAGGCGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCAGCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTa < 2:5831930/148‑1 (MQ=38) aaCACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGCATACGGGGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCAGATGGGCCTTCAGGCGGGTGTCTGCGGCTCGCGGCTCTTGTACCAGGCCACGTACAgcg > 2:5644890/1‑150 (MQ=38) aaCACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGAGGCACCATCGCCATCGCGGGGAAACCCGCGCCGACCCGGGGCCCGCGGGGCCGTCAGGCGGGTTTCGGCGGCACGCGGATCGTGTGCCCGGCCCCGGACAgcg > 2:1072483/1‑150 (MQ=255) acGCCTCTGGTAGGAGC‑GGGGTTAACCGCGAATACGGTGGTCGATGCACCATCGCAATCGCGGGTAAACCCCCTCCGACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTTTAACAGGCCACGTACAGCGCCg > 1:2976087/1‑150 (MQ=255) ctgtGGTCGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGAAACCCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAg < 1:7356338/147‑1 (MQ=255) tctGGTAGGAGC‑GGGTTTACCCGCGACTACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTTCGGCTCGCGGATCTTTTACCAGGCCACGTACAGCGccggccgg > 2:7069500/1‑150 (MQ=255) gTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCCTCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAAca < 2:8798773/150‑1 (MQ=255) gTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATCCACCATCGCATTCGCGGTTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAAca < 1:1423786/150‑1 (MQ=255) tcggcgC‑GGGTTTCCCCGCTAATAGGGTGGTCGATGCACCATCGATTTCGCGGTAAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAAcag < 1:7029733/145‑1 (MQ=255) tAGGAGC‑GGGTTTACCCGCTAATACGGTGGTCGATGCACCATCGCATTCGCGGTTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAAcag < 2:5401090/150‑1 (MQ=255) aGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACagcagc < 2:7628507/150‑1 (MQ=255) aGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACagcagc < 2:6401974/150‑1 (MQ=255) aGC‑GGGTTTACCCGCGAATACGGGGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACagcagc < 2:4199532/150‑1 (MQ=255) aCCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAg > 1:550184/1‑150 (MQ=255) ccGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCg > 2:8832238/1‑89 (MQ=14) ccGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 1:7139244/1‑150 (MQ=25) ccGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 2:1902247/1‑150 (MQ=25) ccGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 1:968244/1‑150 (MQ=255) ccGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 1:2112917/1‑150 (MQ=255) ccGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 2:7207346/1‑150 (MQ=255) ccGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 1:6383061/1‑150 (MQ=255) ccGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 2:622822/1‑150 (MQ=255) ccGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 2:6160820/1‑150 (MQ=255) cgcgAATCCGGTGGGCGCTCCACCAGCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTc < 1:3494680/150‑1 (MQ=255) cgcgAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTc > 2:2069406/1‑150 (MQ=255) cgcgAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTc < 2:6850531/150‑1 (MQ=255) gcgAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCg > 1:331475/1‑150 (MQ=37) gcgAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCg > 2:3140336/1‑150 (MQ=255) aaTACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCa > 1:2647286/1‑150 (MQ=255) tACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACg > 1:3581040/1‑150 (MQ=255) tACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACg < 2:294346/150‑1 (MQ=255) aCGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACga < 2:7701644/150‑1 (MQ=255) ggtggtCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCAGATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACgatg > 2:3599549/1‑150 (MQ=255) ggtCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATc < 2:5873063/150‑1 (MQ=255) gtCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATcc > 2:7466897/1‑150 (MQ=255) tCGATGCACCCTCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATccc < 2:4502031/150‑1 (MQ=255) tCGATCAACCATCGATTTCGCGGCTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATccc < 1:3138440/150‑1 (MQ=255) gATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTc < 2:2477034/134‑1 (MQ=255) gATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTc > 1:2477034/1‑134 (MQ=255) tGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCa > 1:8764432/1‑150 (MQ=255) | AGGTTTGAAGGGGTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCGAATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCA > NC_002947/5899612‑5899908 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |