| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,899,769 | C→T | 12.0% | intergenic (‑191/+43) | PP_5172 ← / ← PP_5173 | hypothetical protein/RND family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,899,769 | 0 | C | T | 12.0% | 600.5 / 59.0 | 227 | intergenic (‑191/+43) | PP_5172/PP_5173 | hypothetical protein/RND family transporter |
| Reads supporting (aligned to +/- strand): ref base C (104/91); new base T (7/20); total (111/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.26e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.99e-01 | |||||||||||
Only 100 of 230 total aligned reads displayed.
GGGGTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATGGCGT > NC_002947/5899621‑5899918 | ggggTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATcaca > 1:971708/1‑150 (MQ=255) gggTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTTCCCGCG‑AATACGGTGGTCGATGCACCATCGCAt > 2:3036735/1‑150 (MQ=255) gggTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCAt > 2:3037365/1‑150 (MQ=255) gTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGCGGGGTTTACCCCCC‑AA‑AAGGTGGTCGCATCACCAGAGCAtta > 1:3030864/1‑149 (MQ=255) tttGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTcgc < 2:8401084/150‑1 (MQ=255) tttGCGCATTGCTTGAGGGAAATAGTAGTGACGCGGGATTATACTTAAAAATACTGATTAACAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTcgc < 2:5112675/150‑1 (MQ=39) ttGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATGCGATGGTGCATCGACCACCGTATTcgcg < 2:8867713/150‑1 (MQ=37) ttGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATGCGATGGTGCATCGACCACCGTATTcgcg < 2:7014522/150‑1 (MQ=37) ttGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTcgcg < 1:1439329/150‑1 (MQ=255) ttGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTcgcg < 2:3362485/150‑1 (MQ=255) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATGCGATGGTGCATCGACCACCGTATTCGCgg < 1:2357530/150‑1 (MQ=25) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATGCGATGGTGCATCGACCACCGTATTCGCgg < 2:4566035/150‑1 (MQ=25) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCgg < 2:3475165/150‑1 (MQ=255) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCgg < 1:5136882/150‑1 (MQ=255) tGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCgg < 2:177000/150‑1 (MQ=255) tGCGCCTGGCTTGAGGGAAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAACAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCgg < 1:7954584/150‑1 (MQ=255) gcgcCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATGCGATGGTGCATCGACCACCGTATTCGCggg < 2:8822626/150‑1 (MQ=25) gcgcCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCggg < 2:8935574/150‑1 (MQ=255) gcCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTAACCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTa > 2:1423786/1‑150 (MQ=255) cTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTAACCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTaaa > 1:5873063/1‑150 (MQ=255) tGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑c < 2:6865024/150‑1 (MQ=255) ggCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGTATTCGCGGGTAAA‑cc < 1:8947558/150‑1 (MQ=255) gCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑ccc < 2:1825920/150‑1 (MQ=255) tgggCAATAGTCTTGAGGCGGTATTATTCTTAAAAATACTGTTTAAGATTTTTTATATAACCATTTAAGAGAACACCCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAA‑CCCGCTcc < 2:7044180/149‑1 (MQ=18) ggCATTAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATAGCATTCGCGGGTAAA‑CCCGCTCCTa > 2:7082576/1‑150 (MQ=255) ggCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTAACCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTa > 2:2720996/1‑150 (MQ=255) ggCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTGTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGGTTAACCGCGTAAAACGG‑GGTCGATGCACCCAAGCAATCTCCGGGAAA‑CCCGCGcccc > 1:6515826/1‑148 (MQ=255) aaTAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACACCCG‑AATACGGTGGTCGATGCACCAACGCATTCGCGGGTAAA‑CCCGCTCCTACCa > 1:613616/1‑150 (MQ=255) tagtagTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCCCCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑gg < 2:8214377/150‑1 (MQ=255) tagtagTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑gg > 2:5058302/1‑150 (MQ=255) agtagtGAGGCGGTATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTCAGAGAACACGCCTCTGGTAGGAGC‑GGTTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑ggg < 2:6558686/150‑1 (MQ=255) agtagtGAGGCGGTATTATTCTTAAAAATACTGTTTAAGAATTTTAATATAACCATTTAAGCGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGTTGCACCATCGCATTCGCGGTTAAA‑CCCGCTCCTACCA‑ggg < 2:7682038/150‑1 (MQ=38) gCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATgg > 1:7628507/1‑150 (MQ=255) gCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GCGTTTACCCGCG‑AATACGGTGGTCGATGCACCCTCGCATTCGCGGGTCAA‑CCCGCTCCTACCA‑GGGGCCATATgg > 1:4672963/1‑150 (MQ=255) ttataCTAAAAAATAATGTTTAATAATTTTTTTATAACCTTTTAAGATAACACGCCTCTGTTTGGAGC‑GGTTTTACCCGCT‑ATTACGGTGTTCGATGCACCATCGCATTCGCGGTAAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTc < 2:4629576/150‑1 (MQ=255) tattatTAAAAATACTGTTAAAGATTTTTTATATAACCTTTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCa < 2:1128194/150‑1 (MQ=255) tattCTTAAAAATACTGTTTAATAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGTTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCa < 1:7616149/150‑1 (MQ=255) tattCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTGTACACGCG‑CATAAGGTGGTCGTTTGACCAAACCATTAGCCGGTAAA‑ACCCCTACAACAACGGGGCCAAAGGGGcgtaa > 1:1178634/1‑146 (MQ=255) attTTTAAAAATTCTTTTTAATAATTTTTATATAACAATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATAGGGTGGTCGTTGCACCATGGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAg < 1:8234013/150‑1 (MQ=38) ttAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCgt > 2:2701404/1‑150 (MQ=255) aTACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATAAGGTGGTCGATGCACCAACGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCCTATGGGCCTTCAGGCGTGTTTCt > 2:8653785/1‑150 (MQ=255) tACTTTTTAACAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTTGGAGC‑GGGTTTACCCGCT‑AATACGGTGGTCGATGCACCATCGCATTCGCGGTTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTg < 2:845365/150‑1 (MQ=255) attttttAATATTTTTTATAAAACATTTTACGACAACACGCCTGTGTTTGGCGG‑GGTTTTACCCGCG‑AATAGGGTGGTCGAGGCCCATTCGCATTCGCGGTTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGc < 1:2781324/146‑1 (MQ=255) tttttACGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTTGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAC‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCgg < 2:7660381/148‑1 (MQ=255) tGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTAACCGCC‑AAAACGGTGGTCGATGCACCATCGCATTCGCCGGTAAA‑CCCCCTCCTACCA‑GGGGCCAAAAGGGCCATCAGGCGTGTTTATTCgg > 1:2885225/1‑150 (MQ=255) tttAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCt > 2:3572037/1‑150 (MQ=255) tgaaGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATAGGGTGGTCGATGCCCCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTc < 2:4791944/148‑1 (MQ=255) tAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AAAAAGGTGGGCGATGCACCATCGCATTAGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATAGGGGCCTTCAGGCGTGTTTCTGCGGCTcg > 1:6081098/1‑150 (MQ=39) tAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTAACCCCG‑AATACGGTGGTCGATGCACCAACGCATTAGCGGGTAAA‑ACCGCTCCTACCA‑GGGGCCAAATGGGCCATCAGGCGTGTTTATGCGGCTcg > 1:4484237/1‑150 (MQ=255) tttttATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATc < 2:2053433/150‑1 (MQ=255) tttttATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATc < 2:2131276/150‑1 (MQ=255) tttttATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATc < 2:5228822/150‑1 (MQ=255) tttttAAAAAACAATTTAAGACACCACGCCTCTGGTAGGCGG‑GTTTTTACCGGCT‑AATAGGTTGTTCGATGCACCATCGAATCCG‑GGGTAAACCCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATc < 1:2642095/150‑1 (MQ=255) ttttATATAACCATTTAAGAGAACGCGCCTCTGGTAGGAGC‑GGGTTTTACCCCG‑AAAAACGTGGTCGATGCACCAAAGCCTAAGCCGGTAAA‑ACCCCACCAACCA‑AGGGCCCAAATGGCCATAAGGCCTGTTTTTGCGGCGCGCgggtat > 1:6288230/1‑146 (MQ=255) ttttATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGTTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCt < 2:2378236/150‑1 (MQ=255) aaCCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCGCCTACCA‑GGGGCCATATGGGCCATCAGGCGGGTTTCTGCGGCTCGCGGATCTTTTACAAg > 2:5716211/1‑150 (MQ=38) aaCACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCGTCAGGCGTGTTTCTGCGGCGCGCGGATCTTGTACCCGGCCACGTCCAgcg > 2:5644868/1‑150 (MQ=255) aaCACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGAGGCACCATCGCCATCGCGGGGAAA‑CCCGCGCCGACCC‑GGGGCCCGCGGGGCCGTCAGGCGGGTTTCGGCGGCACGCGGATCGTGTGCCCGGCCCCGGACAgcg > 2:1072483/1‑150 (MQ=255) acGCCTCTGGTAGGAGC‑GGGGTTAACCGCG‑AATACGGTGGTCGATGCACCATCGCAATCGCGGGTAAA‑CCCCCTCCGACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTTTAACAGGCCACGTACAGCGCCg > 1:2976087/1‑150 (MQ=255) ctctGGTAGGAGC‑GGGTTTACGCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAg < 2:5668254/150‑1 (MQ=255) gtcggAGC‑GGGTTTACCCGCG‑AATAGGGTGGTCGCTGCACCATCGCATTCGCGGGTAAC‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAAca < 1:4443775/147‑1 (MQ=255) gTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATCCACCATCGCATTCGCGGTTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAAca < 1:1423786/150‑1 (MQ=255) tAGGAGC‑GGGTTTACCCGCT‑AATACGGTGGTCGATGCACCATCGCATTCGCGGTTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAAcag < 2:5401090/150‑1 (MQ=255) aGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACagcagc < 2:6401974/150‑1 (MQ=255) aGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACagcagc < 2:7628507/150‑1 (MQ=255) aGC‑GGGTTTACCCGCG‑AATACGGGGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACagcagc < 2:4199532/150‑1 (MQ=255) tACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCaa > 2:1554437/1‑150 (MQ=255) aCCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAg > 1:550184/1‑150 (MQ=255) ccGCG‑AATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 2:1902247/1‑150 (MQ=25) ccGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTTCCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 1:6318186/1‑150 (MQ=255) ccGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 2:3880198/1‑150 (MQ=255) ccGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 1:968244/1‑150 (MQ=255) ccGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 1:6780860/1‑150 (MQ=255) ccGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 2:622822/1‑150 (MQ=255) ccGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 2:6160820/1‑150 (MQ=255) ccGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGt > 1:2112917/1‑150 (MQ=255) gcg‑AATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCg > 1:331475/1‑150 (MQ=37) gcg‑AATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCg > 2:3806046/1‑150 (MQ=37) gcg‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCg > 1:7279101/1‑150 (MQ=255) tACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACg > 1:3581040/1‑150 (MQ=255) aCGGTGGTCGATGCACCATCGCAGTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACga < 2:7701697/150‑1 (MQ=255) ggtggtCGATGCACCATCGCATTCGCGGGTCAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCGGGCGTGTTGCTGCGGCTCGCGGATCGTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACgatg > 2:8118639/1‑150 (MQ=255) ggtggtCGATGCACCATCGCAGTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACgatg > 2:3599557/1‑150 (MQ=255) ggtCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATc < 2:5873063/150‑1 (MQ=255) gtCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATcc > 2:7466893/1‑150 (MQ=255) tCGATCAACCATCGATTTCGCGGCTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATccc < 1:3138440/150‑1 (MQ=255) cGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCg < 2:8032023/150‑1 (MQ=255) gATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTc < 2:2477034/134‑1 (MQ=255) tGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCa > 1:8764432/1‑150 (MQ=255) aCCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATc > 2:6633647/1‑150 (MQ=255) ccATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCa < 2:2469539/150‑1 (MQ=255) aTCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGGTCGCGGATCTTGTAGCAGGGCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGTTCCCGCCAATCATg > 2:7405185/1‑150 (MQ=255) aTCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATg < 1:4082311/150‑1 (MQ=255) aTCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATg > 1:7115445/1‑150 (MQ=255) tCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATgg > 1:3543951/1‑150 (MQ=255) tCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATgg > 1:5600155/1‑150 (MQ=255) tCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATgg > 1:1676214/1‑150 (MQ=255) tCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATgg > 1:1050643/1‑150 (MQ=255) cGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATGGc > 2:6588575/1‑150 (MQ=255) cGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATGGc > 2:3000898/1‑150 (MQ=255) | GGGGTTTTGCGCCTGGCTTGAGGGCAATAGTAGTGAGGCGGGATTATTCTTAAAAATACTGTTTAAGAATTTTTATATAACCATTTAAGAGAACACGCCTCTGGTAGGAGC‑GGGTTTACCCGCG‑AATACGGTGGTCGATGCACCATCGCATTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATGGCGT > NC_002947/5899621‑5899918 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |