| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,926,542 | G→C | 7.7% | intergenic (‑134/+63) | gcvP‑II ← / ← gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,926,542 | 0 | G | C | 7.7% | 649.6 / 5.4 | 230 | intergenic (‑134/+63) | gcvP‑II/gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Reads supporting (aligned to +/- strand): ref base G (102/105); new base C (16/6); total (118/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 233 total aligned reads displayed.
TGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCA > NC_002947/5926394‑5926691 | tGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACAGGGGCTGCACCCgg > 1:6661426/1‑149 (MQ=255) gACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAACCTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGGCTCg > 2:2870048/1‑150 (MQ=255) gACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCg > 2:2556921/1‑150 (MQ=255) aCTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGa < 2:6486398/150‑1 (MQ=255) tGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAAt < 2:4062783/150‑1 (MQ=255) tGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGACTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAAt > 1:2137581/1‑150 (MQ=255) ggACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGc > 2:7429971/1‑150 (MQ=255) gACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCa < 2:4912375/150‑1 (MQ=255) cATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGTGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGt < 1:4426280/150‑1 (MQ=255) aTGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTg < 2:1772867/150‑1 (MQ=255) acgacgCTCTCTTCCTAGACCTGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTAGCGGGAAAATCCGCTCCAACAGGGGCGGCCACCGCCGCGAATGCACTTCTg > 1:941178/1‑150 (MQ=255) gacgCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTa < 1:2883062/150‑1 (MQ=255) gCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCt < 1:174143/150‑1 (MQ=255) gCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCt < 1:7313036/150‑1 (MQ=255) tctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCGCGCCAACCGGGGGTGCCACCGGCTCGAATTCACTGCTGTTCCagt > 1:6238182/1‑150 (MQ=255) tctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGt < 2:7564098‑M2/150‑2 (MQ=255) tctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACAGGGGCTGCACCCGGCTCGAATGCAGTGCTGTACCTGt < 1:3749721‑M2/150‑2 (MQ=255) tctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAACCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGt > 2:7443953‑M2/1‑149 (MQ=255) ctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCGCGCCAACACGGGCTGCACCCGTCGCGAAAGCCGTGCGGTACCTGtg < 1:7269017‑M2/150‑3 (MQ=255) tctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCGCTCCTAAAGGGGCTGCACCCCGCTCGAATGGAGTGCTGTACCTGtgt < 1:5850974‑M2/150‑4 (MQ=255) ttCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCGGtgtag < 2:6978786‑M2/150‑6 (MQ=255) ttCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCACCAACAGGGGCGGCACCCGTCGCGAATGCAGTGCTGTACCAGtgttg < 1:8717211‑M2/150‑6 (MQ=255) ccTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGGCTCGAATGCCGTGCTGTACCGGtgtagga < 2:8048085‑M2/150‑8 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagc > 1:7753809‑M2/1‑141 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagc > 1:128364‑M2/1‑141 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagc > 1:8867699‑M2/1‑141 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagc > 2:4453509‑M2/1‑141 (MQ=255) cAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagcggctt > 2:1774155‑M2/1‑136 (MQ=255) cTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGGGAAAGACGCTCCGAAAGGGGCTGCACCCCGGTCGAATGCCGTGCGGTACCAGTGTTGGGGCGGCGTTATcc > 1:4568224/1‑150 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagcggctttagccg > 1:3962207‑M2/1‑130 (MQ=255) aTGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCTCCTACAGGGGCAGCACCCCTCACGAATGCAGTGCTGTACCTGtgtaggagcggcgttagccgcg < 1:9146560‑M2/150‑23 (MQ=255) ggAAACTTACACGTCTTGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagcggctttagccgcgaa > 2:7571094‑M2/1‑126 (MQ=255) ggAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCGGtgtaggagcggcgttagccgcgaa < 2:6121848‑M2/150‑25 (MQ=255) cTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGGCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGaagcaag > 1:6005883/1‑150 (MQ=255) tACAAGTCTAGGAAGGGATTGCCGATTCTGCCGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCAAAAGCCCCTCCAACCCCGGCTGCACCCCTCACCAATGCAGTGCAGTACCTGGGTACGAGCGGCGTTAGCCGCGAagcaacca > 2:7249424/1‑150 (MQ=255) aCAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCACTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAgcaagcaa < 2:1444974/150‑1 (MQ=255) aaGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCGTTAGCCGCGAAGCAAGCAAcg > 2:1395710/1‑150 (MQ=255) aaGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCGGCCCCCGTCTCGAAGGCAGTGCTGGACCGGGGTGGGAGCGGCGTTAGCCGCGACGCAAGCAAcg > 2:226281/1‑150 (MQ=255) aaGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCGCCAACAGGGGCGGCACCCCGCGCGAAAAAAATGCAGTTCCAGTGTATGTGCGGCTTTATCCGCCAAGCACACAAcc > 1:1708749/1‑149 (MQ=255) cTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGt > 2:3491053/1‑150 (MQ=255) tcggACGGGATTGCCGTTGGTGCGGGGAAACTTGTTTGCCGGCCCGGCCTCTTCGCGGCTAACGCCGCTCCTACGGGGGCTGCACCCGTCTCGAATGCTGTGCTGTACCTGTGTCGGCGCGGATTTCGCCGCGAAGCAAGCAACGCGGTc < 2:1870109/148‑1 (MQ=255) tAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCGGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTc > 2:1388636/1‑150 (MQ=255) tAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTc > 2:3664661/1‑150 (MQ=255) aaGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCAAAAGCCCCACCTACAGGGGCTGCACCCCTCTCGAATTCAGTGCGGTACCGGTGTAGGATCGGCGTTAGCCCCGAAGCAAGCAACGCGGTCTTAc > 2:1589580/1‑150 (MQ=255) aGGTATTGCCTTTTGTGCGGTTAAACTTTTTTGCTGGCCGGGCATCTTCGCGGATAATGCCGCTCCTACCGGGGCTGCACCCGTCTCTATTGCAGTGCTGTACCTTTTTTGGAGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACt < 2:1045703/150‑1 (MQ=255) ccGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAATCAAGCAACGCGGTCTTACTAGCCAATc > 2:630892/1‑150 (MQ=255) ctaTTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTGCGGGGATAAAGCCGCTCCAACCGGGGCTGCACCCGTCTCTAAGGCAGTGCTTTACCGGTGTCGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCa < 2:4587373/148‑1 (MQ=255) gATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCGCTCCTACACGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCAGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCac > 2:7273474/1‑149 (MQ=255) gATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTATCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAg > 2:1375404/1‑150 (MQ=255) gggggggAAATTTTTTTGCTGGCCGGGCCTCTTCGGGGATAAAGCCGCTCCTACTGGGGCTGCACCCGTCTGTATTGCTGTGTTGTACGTGTTTTGGTGGGGTTTTAGCCGCTAAGCAAGCAACGGGTTCTTACTCGCCAATCAGCGCCt < 2:2036825/147‑1 (MQ=255) ggggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAAAGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGt > 2:5993178/1‑150 (MQ=255) ggggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCTCCAACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGGGTAGGAGCGGCTTTATCCGCGCAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCAGGt > 2:7748830/1‑150 (MQ=255) ggggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCAAAAGCCCCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCCCGAAGCAAGCAACGCCGTCTTACTCGCCAATCAGCGCCTGGt > 2:5032293/1‑150 (MQ=255) aaCTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTCCAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagcca < 2:8322889/150‑1 (MQ=255) cTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGGGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagccagc < 2:9029977/150‑1 (MQ=255) cTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTACAAAAGGGGCTGCACCCGTCGCGAATGCAGTGCTGTACCGGTGTAGGATCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCATACTCGCCAAGCAGCGCCGGGTagccagc > 2:3398023/1‑150 (MQ=255) cAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCa < 2:2205525/150‑1 (MQ=255) cggCCCGGCCTCTCCGCGCCAAACCCCGCCCCACCCGGGGCCCCACCCGCCTCTATTGCATTGCTGAACCTGTGTCGGAGCGTATTACCCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAg < 1:2639448/149‑1 (MQ=255) ggCCTCTTCGCGGCTAAATCCCCTCCTAAAGGGGCTGCACCCGTCACGAATGCAGTGCTTTACCTGGGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAAACCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCCTCCACCAAcat > 2:30818/1‑148 (MQ=255) gCCTCTTCGCGGCTAACGCCGCCCCTCCCGGGGCTGCACCGGTCGGGAATGCCGTGCGGTACCTGTGTCGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTg < 2:2385228/150‑1 (MQ=255) tgtaggagcgGCTTTAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGt > 2:1812981/8‑150 (MQ=255) tctTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagcggctttagccgcgaagaggccgggcctgcaaacaagtttccccgcacaatcggcaatcccttcctagacatgtaagttt < 2:6769863‑M2/150‑89 (MQ=255) ctTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCa < 2:5802277/150‑1 (MQ=255) ttCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACATGTCCAg > 2:5712125/1‑150 (MQ=255) gCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGc > 2:8392185/1‑150 (MQ=255) tAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCg > 2:5239267/1‑150 (MQ=255) tAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCg > 2:9036638/1‑150 (MQ=255) tAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCg > 1:2024880/1‑150 (MQ=255) tAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCg > 1:4925610/1‑150 (MQ=255) acgCCGCTCCTCCCGGGGCGGCACCCGTCGCGATGGCCGTGCTGTACCTGTGTCGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCggg < 1:2870048/148‑1 (MQ=255) aGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGTAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGt > 1:276434/1‑150 (MQ=255) aGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGt > 1:108712/1‑150 (MQ=255) gCCGCGCCTCCGGGGGCTGCCCCCGTCTCGACGGCCGGGGTGTCCGGGTGTCGGCGGGGGTTTCGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGtt < 1:1868126/150‑1 (MQ=255) ccGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagcggctttagccgcgaagaggccgggcctgcaaacaagtttccccgcacaatcggcaatcccttcctagacttgtaagcttccatgaggcctggtc < 2:3244891‑M2/150‑104 (MQ=255) ccGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagcggctttagccgcgaagaggccgggcctgcaaacaagtttccccgcacaatcggcaatcccttcctagacgtgtaagcttccatgaggcctggtc < 2:1326075‑M2/150‑104 (MQ=255) ccGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTg > 1:690685/1‑150 (MQ=255) gCTCCCACCGGGGCTCCCCCCGTCTCGATTGCCGTGCTGTACGTGTTTGGGCGGGGCTTTACCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt < 1:7895019/150‑1 (MQ=255) tCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGtgtaggagcggctttagccgcgaagaggccgggcctgcaaacaagtttccccgcacaatcggcaatcccttcctagacttgtaagtttccatgaggcctggtctagg < 1:4303755‑M2/150‑108 (MQ=255) ctcccggggCGGCACCCGTCGCGACTGCCGGGCTGTACCTGTGTAGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGc < 2:1958869/145‑1 (MQ=255) cTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGc > 2:8879084/1‑150 (MQ=255) tACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCt > 2:4431420/1‑150 (MQ=255) aCAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCtt > 2:578148/1‑150 (MQ=255) cAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTc > 2:8628833/1‑150 (MQ=255) gggCTGCACCCGTCTCGACGGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAt < 2:302821/150‑1 (MQ=255) gcggcccccGTCTCGACTGCAGTGCTGTACCTGTGTAGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAttt < 2:3879355/144‑1 (MQ=255) gCTGCACCCGTCTCGAATGCCGTGCTGTCCCTGTGTTGTAGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAttt < 1:1389767/150‑1 (MQ=255) gCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGTAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAttt < 2:276434/150‑1 (MQ=255) gCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAttt > 1:7493066/1‑150 (MQ=255) gCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAttt < 1:8365847/150‑1 (MQ=255) gCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAttt < 2:5144777/150‑1 (MQ=255) tGCACCCGTCTCGATTGCTGTGCTGTCCGTGTGTTGGCGGGGCTTTCGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGa < 1:6402176/150‑1 (MQ=255) tGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGa < 1:1490372/150‑1 (MQ=255) tGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGa < 1:3678708/150‑1 (MQ=255) agCACCCGTCTCGAATGCAGTGCTGAACCTGTGTAGTAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCACCAATCAGCGCCTGGTAGCCAGCCGGATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGa < 1:3166433/149‑1 (MQ=255) ccGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGc < 1:5346417/135‑1 (MQ=255) ccGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGc > 2:5346417/1‑135 (MQ=255) cagTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATc > 2:410316/3‑150 (MQ=255) cGTCTCTATTGCAGTGCTGTACCTGTTTTGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATcc < 1:8116726/150‑1 (MQ=255) cGTCTCGAATGCTGTGCTTTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATcc < 2:768226/150‑1 (MQ=255) gTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCa > 2:5056171/1‑150 (MQ=255) | TGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCA > NC_002947/5926394‑5926691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |