| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,967,555 | G→T | 5.5% | intergenic (+75/+25) | had → / ← PP_5232 | (S)‑2‑haloacid dehalogenase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,967,555 | 0 | G | T | 5.5% | 987.4 / 31.2 | 292 | intergenic (+75/+25) | had/PP_5232 | (S)‑2‑haloacid dehalogenase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (111/165); new base T (5/11); total (116/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 305 total aligned reads displayed.
CTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGCCTTGGCCAGTGCATC > NC_002947/5967407‑5967705 | tGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGAcggc > 1:7141320/1‑150 (MQ=255) tGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGAcggc > 2:7608921/1‑150 (MQ=255) tGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGAcggc > 1:7927029/1‑150 (MQ=255) gCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGAcggcgg < 1:632027/150‑1 (MQ=255) gCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGAcggcgg > 1:4962928/1‑150 (MQ=255) aTCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCt > 1:2792196/1‑150 (MQ=255) tCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCtt < 1:8702166/150‑1 (MQ=255) aGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCCGTCGCTGCGGGCtttt < 1:437735/150‑1 (MQ=255) aGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCtttt < 2:5086558/150‑1 (MQ=255) aGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCAGTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCtttt < 2:6007554/150‑1 (MQ=255) aGGCGCCGGAGGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCtttt < 2:5353590/150‑1 (MQ=255) ggCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCttttt > 2:3612465/1‑150 (MQ=255) gcgcCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCtttttt < 2:4747949/150‑1 (MQ=255) cgcCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTg < 1:5448901/150‑1 (MQ=255) gcCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGc < 2:6236560/150‑1 (MQ=255) ccGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGcc < 1:4509135/150‑1 (MQ=255) ccGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGcc < 2:222408/150‑1 (MQ=255) cGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCa > 2:1453610/1‑150 (MQ=255) cGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCa > 2:4564601/1‑150 (MQ=255) cGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCa > 2:3429535/1‑150 (MQ=255) cGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCa > 2:7378050/1‑150 (MQ=255) cGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGACTTTTTTGCGATCAGCCa > 2:20054/1‑150 (MQ=255) aTCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCa < 1:8464156/150‑1 (MQ=255) aTCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCa > 1:293353/1‑150 (MQ=255) cAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGAt > 1:1813800/1‑150 (MQ=255) cGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTg < 2:8658241/150‑1 (MQ=255) aGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCg > 1:3815292/1‑150 (MQ=255) tGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTAc > 2:3290735/1‑150 (MQ=255) cccGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACtt < 2:5897549/150‑1 (MQ=255) cccGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACtt < 2:6955918/150‑1 (MQ=255) ccGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACttg > 2:2556904/1‑150 (MQ=255) gACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACttgtt < 1:8796115/150‑1 (MQ=255) gACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACttgtt < 1:3612465/150‑1 (MQ=255) tGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGACTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCt < 1:20054/150‑1 (MQ=255) cTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTgg < 1:163613/150‑1 (MQ=255) tCGCTCTCTGGCGCTGACGGGAGCCGCTTTGCGGACCATTCGAGGGCTCGGTCAACACACAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGc < 2:7986428/150‑1 (MQ=255) tCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGc > 1:8223180/1‑150 (MQ=255) tCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGc < 2:611432/150‑1 (MQ=255) gcgcgcTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGctt > 1:1004565/1‑150 (MQ=255) cgctggcgctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGcttctt < 1:908551/150‑1 (MQ=255) tggcgctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTggg < 1:5908610/150‑1 (MQ=255) tggcgctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTggg > 2:4840117/1‑150 (MQ=255) cgctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCgg < 2:1758714/150‑1 (MQ=255) cgctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCgg < 2:2974323/150‑1 (MQ=255) ctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGt < 2:5404444/150‑1 (MQ=255) gACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCa < 2:9066153/150‑1 (MQ=255) aCGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAg > 1:3278480/1‑150 (MQ=255) cGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGc < 2:7927029/150‑1 (MQ=255) gggAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCg > 2:6435454/1‑150 (MQ=255) ccGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGc < 2:2915415/90‑1 (MQ=255) cTTTGCGGCCCATTCGCGGGCACGGGCAACACAACACCCAGAGGCATAAAAAAGCCCGCAGGTACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGtt < 1:2539856/150‑1 (MQ=255) cTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGcc < 1:1486948/108‑1 (MQ=255) cTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGtt < 2:1178067/150‑1 (MQ=255) cTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGtt < 1:7756679/150‑1 (MQ=255) cGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCt > 1:9000265/1‑150 (MQ=255) ggCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTc < 2:4310394/150‑1 (MQ=255) gCCCATTCGCGGGAACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGACGTACTAGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCg > 2:8982383/1‑150 (MQ=255) cATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACt > 2:8919057/1‑150 (MQ=255) aTTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCTACtt > 2:753638/1‑150 (MQ=255) cgcgGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCt < 2:378204/150‑1 (MQ=255) cgggcacgggcaACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGc < 1:514407/150‑1 (MQ=255) caaatgggccACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCAc < 1:1226056/145‑1 (MQ=255) gcacgggcaACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCAcc < 2:3905158/150‑1 (MQ=255) acgggcaACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCtt < 1:2382920/150‑1 (MQ=255) gggcaACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTgc > 2:2097920/1‑150 (MQ=255) ggcaACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTgcc < 1:6031306/150‑1 (MQ=255) gcaACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTgccg > 2:331015/1‑150 (MQ=255) gcaACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTgccg < 2:3671354/150‑1 (MQ=255) gcaACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTgccg < 1:1519536/150‑1 (MQ=255) acaAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGCCTTCCTGCACCTTGCCGCcgcg > 2:3172276/1‑150 (MQ=255) acaAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCcgcg > 2:3103001/1‑150 (MQ=255) acaAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCcgcg > 2:6384539/1‑150 (MQ=255) caAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCga < 1:7984840/150‑1 (MQ=255) caAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCga < 1:3977429/150‑1 (MQ=255) aaaaCCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGGTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCgag > 2:6574602/1‑150 (MQ=255) aaaaCCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCgag > 1:6833869/1‑150 (MQ=255) aaaaCCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCgag > 2:2787170/1‑150 (MQ=255) aCCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGaaa < 1:2734632/150‑1 (MQ=255) aCCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACGTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGaaa > 2:7840927/1‑150 (MQ=255) ccACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAgg < 1:5590151/150‑1 (MQ=255) ggCATAAAAAAGTCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAAttc < 1:4885958/150‑1 (MQ=255) gCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAAttct < 2:8182912/150‑1 (MQ=255) gCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAAttct < 2:8182621/150‑1 (MQ=255) cgcaaaaaaGCCCGCCGTCGCTGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAAttctt > 2:4073070/4‑150 (MQ=255) aaaaaaGCCCGCCGTCGCTGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGACTTCTTCCa > 1:7626225/1‑150 (MQ=255) aaaaaaGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCa < 1:6499190/150‑1 (MQ=255) aaaaaGCCCGCCGTCGCTGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCACCGCGAGAAAGGAATTCTTCCAt > 1:137869/1‑150 (MQ=255) aaaaGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATc > 2:6317403/1‑150 (MQ=255) aaaaGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATc > 1:8394946/1‑150 (MQ=255) aaaGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCg < 1:6103320/150‑1 (MQ=255) aaGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGc > 1:4084376/1‑150 (MQ=255) aaGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGc > 2:7731776/1‑150 (MQ=255) cccGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGCCtt < 2:1039860/150‑1 (MQ=255) ccGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGCCTTg > 1:473381/1‑150 (MQ=255) ccGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGCCTTg > 2:3407457/1‑150 (MQ=255) gCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGCCTTGGc < 2:7265733/150‑1 (MQ=255) gCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGCCTTGGc < 1:3261977/150‑1 (MQ=255) cGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGCCTTGGCCAGt < 1:1184033/150‑1 (MQ=255) ggcggGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGCCTTGGCCAGTGCAt < 2:6883723/150‑1 (MQ=255) ggcggGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGCCTTGGCCAGTGCAt > 2:15474/1‑150 (MQ=255) | CTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGGGTCAGCGACCACGTTGGCCTCGACTTCCTGCACCTTGCCGCCGCGAGAAAGGAATTCTTCCATCGCCTTGGCCAGTGCATC > NC_002947/5967407‑5967705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |