Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,971,712 G→C 8.0% Y520* (TAC→TAG) ‡ PP_5236 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,971,7120GC 8.0% 974.6 / 56.6 302Y520* (TAC→TAG) ‡PP_5236hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (125/149);  new base C (6/18);  total (131/171)
Fisher's exact test for biased strand distribution p-value = 5.59e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.31e-01

Only 100 of 306 total aligned reads displayed.

CCGGCGTAACAAAATCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCAGGTTCAGTTCGGC  >  NC_002947/5971565‑5971861
                                                                                                                                                   |                                                                                                                                                     
 cGGCGTAACAAAATCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTAc                                                                                                                                                    >  1:2753712/1‑150 (MQ=255)
   gCGTAACAATATCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACtt                                                                                                                                                  <  1:7267833/150‑1 (MQ=255)
   gCGTAACAAAATCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACtt                                                                                                                                                  >  2:2818890/1‑150 (MQ=255)
        aCAAAATCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAAGTACAACCTGgcct                                                                                                                                             <  1:7104107/150‑1 (MQ=255)
        aCAAAATCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAAGTACAACCTGgcct                                                                                                                                             <  1:3408520/150‑1 (MQ=255)
        aCAAAATCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCACAGGCAGGCCAGGTTGTACTTGgcct                                                                                                                                             >  1:4502782/1‑150 (MQ=255)
          aaaaTCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGgcctgc                                                                                                                                           <  2:8389981/150‑1 (MQ=255)
          aaaaTCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGgcctgc                                                                                                                                           <  2:2968960/150‑1 (MQ=255)
           aaaTCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGgcctgcc                                                                                                                                          <  1:102451/150‑1 (MQ=255)
           aaaTCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAAGTACAACCTGgcctgcc                                                                                                                                          <  2:4498505/150‑1 (MQ=255)
           aaaTCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGAGCAGGCAGGCCAAGTACAACCTGgcctgcc                                                                                                                                          <  1:1726672/150‑1 (MQ=255)
            aaTCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGgcctgcct                                                                                                                                         <  1:4194780/150‑1 (MQ=255)
            aaTCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGgcctgcct                                                                                                                                         <  2:8313995/150‑1 (MQ=255)
             aTCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGcctgcctg                                                                                                                                        <  2:1529789/150‑1 (MQ=255)
             aTCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGcctgcctg                                                                                                                                        <  1:3227764/150‑1 (MQ=255)
                 ccAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCGGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAAGTACAACCTGGCctgcctgcgca                                                                                                                                    <  1:5048872/150‑4 (MQ=39)
                 ccAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCtgctgc                                                                                                                                    <  2:2229009/150‑1 (MQ=255)
                 ccAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCtgctgc                                                                                                                                    >  2:3639347/1‑150 (MQ=255)
                          aCCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCTGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCa                                                                                                                           <  1:1209496/150‑1 (MQ=255)
                          aCCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCa                                                                                                                           <  2:6541287/150‑1 (MQ=255)
                           ccGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGTGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCAc                                                                                                                          <  2:783470/150‑1 (MQ=255)
                            cgcgCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCAcc                                                                                                                         <  2:1768194/150‑1 (MQ=255)
                                 acacGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACg                                                                                                                    >  1:8726299/1‑150 (MQ=255)
                                 acacGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACg                                                                                                                    >  2:208622/1‑150 (MQ=255)
                                  cacGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGc                                                                                                                   <  2:2196605/150‑1 (MQ=255)
                                   acGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCt                                                                                                                  >  2:321484/1‑150 (MQ=255)
                                     gCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGc                                                                                                                >  2:2376941/1‑150 (MQ=255)
                                      cATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCa                                                                                                               <  2:7931171/150‑1 (MQ=255)
                                       aTTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGCCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTgg                                                                                                                                                <  1:4024860/116‑1 (MQ=255)
                                         tGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCAGGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGcc                                                                                                            <  1:8061554/150‑1 (MQ=255)
                                          ggTCTGTCCGTTGCCCAGCGCGTCGACACGCCGGCGCCTGACCGCCAGCTTGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCa                                                                                                           <  1:6947206/150‑1 (MQ=255)
                                          ggTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCa                                                                                                           <  2:1636114/150‑1 (MQ=255)
                                             cTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTa                                                                                                        <  2:1318749/150‑1 (MQ=255)
                                                cccGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCGGCCAGTAccc                                                                                                     >  2:7401957/1‑150 (MQ=255)
                                                cccGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTAccc                                                                                                     >  1:2702574/1‑150 (MQ=255)
                                                cccGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTAccc                                                                                                     >  1:649245/1‑150 (MQ=255)
                                                  cGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCgg                                                                                                   >  1:1968730/1‑150 (MQ=255)
                                                   gTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGc                                                                                                  >  1:2821181/1‑150 (MQ=255)
                                                        ccAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCAGGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCt                                                                                             >  2:7306817/1‑150 (MQ=255)
                                                         cAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTc                                                                                            <  2:259407/150‑1 (MQ=255)
                                                         cAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTc                                                                                            <  2:8649598/150‑1 (MQ=255)
                                                         cAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTc                                                                                            <  2:4823832/150‑1 (MQ=255)
                                                            cgcgTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGAAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTc                                                                                         <  1:7946280/150‑1 (MQ=255)
                                                                tCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGtcga                                                                                                                                                   >  1:6311289/1‑85 (MQ=255)
                                                                tCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGtcga                                                                                                                                                   <  2:6311289/88‑4 (MQ=255)
                                                                    cAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGGTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGt                                                                                 >  1:3934154/1‑150 (MQ=255)
                                                                     caGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTa                                                                                <  1:5984239/149‑1 (MQ=255)
                                                                     aaGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTa                                                                                >  2:5461428/1‑150 (MQ=255)
                                                                     aaGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTa                                                                                >  2:448758/1‑150 (MQ=255)
                                                                     aaGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTa                                                                                <  1:2550239/150‑1 (MQ=255)
                                                                     aaGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTa                                                                                >  2:8482941/1‑150 (MQ=255)
                                                                      aGCAGGCGCCTGACCGCCAGCTTGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCTTGCGCAGGCTGGCCTGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTaa                                                                               <  1:2268847/150‑1 (MQ=255)
                                                                       gCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAAt                                                                              >  2:8916747/1‑150 (MQ=255)
                                                                        cAGGCGCCTGACCGCCAGCATGGCACTGCGCACTTTCAGATCCTCAACGCCGTCCATGCGCAGGCAGGCCAGTTTGTACTTGCCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATg                                                                             <  1:8443113/150‑1 (MQ=255)
                                                                          ggCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATgcg                                                                           >  1:3803359/1‑150 (MQ=255)
                                                                               cTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCggg                                                                      <  1:6651911/150‑1 (MQ=255)
                                                                               cTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCggg                                                                      >  2:1999947/1‑150 (MQ=255)
                                                                                tGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCgggg                                                                     <  1:1486908/150‑1 (MQ=255)
                                                                                    cGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGtt                                                                 >  1:4815206/1‑150 (MQ=255)
                                                                                    cGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGtt                                                                 >  1:5814824/1‑150 (MQ=255)
                                                                                     gCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTg                                                                <  1:6260982/150‑1 (MQ=255)
                                                                                     gCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGGACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTg                                                                <  1:5584350/150‑1 (MQ=255)
                                                                                     gCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCACCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTg                                                                <  1:6055127/150‑1 (MQ=255)
                                                                                      ccAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTgg                                                               >  1:3428625/1‑150 (MQ=255)
                                                                                       cAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGc                                                              <  2:6494735/150‑1 (MQ=255)
                                                                                       cAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGc                                                              >  2:5953139/1‑150 (MQ=255)
                                                                                         gCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCa                                                            <  1:9066713/150‑1 (MQ=255)
                                                                                          cATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAg                                                           <  1:1341484/150‑1 (MQ=255)
                                                                                          cATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTGGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAg                                                           <  1:6682910/150‑1 (MQ=255)
                                                                                               cACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGgccgc                                                      <  2:6115268/150‑1 (MQ=255)
                                                                                                aCTGCGCTCGTTCAGATCATCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGgccgcc                                                     >  2:4009814/1‑150 (MQ=255)
                                                                                                    cgcTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATgg                                                 >  2:4329904/1‑150 (MQ=255)
                                                                                                          ttCAGATCCTCATGGCCGTCCATGCGCTGGCAGGCCAGGTTGTTCTTGGCCTGCCTGCTGCCCGCCTCCACCGCACTCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGc                                           <  1:2342409/150‑1 (MQ=255)
                                                                                                          ttCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGc                                           >  1:1756917/1‑150 (MQ=255)
                                                                                                          ttCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGc                                           >  1:5013230/1‑150 (MQ=255)
                                                                                                          ttCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGc                                           >  1:4641601/1‑150 (MQ=255)
                                                                                                             aGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCa                                        <  1:1172351/150‑1 (MQ=255)
                                                                                                             aGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCa                                        <  1:4329904/150‑1 (MQ=255)
                                                                                                                tCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATAc                                     >  2:8437258/1‑150 (MQ=255)
                                                                                                                 ccTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACa                                    >  1:8653476/1‑150 (MQ=255)
                                                                                                                  cTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACaa                                   >  1:2126228/1‑150 (MQ=255)
                                                                                                                   tCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAg                                  >  1:6870143/1‑150 (MQ=255)
                                                                                                                      tCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGcc                               <  1:5242331/150‑1 (MQ=255)
                                                                                                                       cGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCa                              >  1:8336596/1‑150 (MQ=255)
                                                                                                                       cGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCa                              <  1:7535079/150‑1 (MQ=255)
                                                                                                                        gCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAg                             <  1:8898635/150‑1 (MQ=255)
                                                                                                                        gCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAg                             <  2:5252878/150‑1 (MQ=255)
                                                                                                                             ccATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGgcag                        >  2:5024315/1‑150 (MQ=255)
                                                                                                                                    caggcaggCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCgg                 <  1:303492/150‑1 (MQ=255)
                                                                                                                                    caggcaggCCAAGTACAACCTGGCCTGCCCGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATgg                                                 <  2:665983/118‑1 (MQ=38)
                                                                                                                                     aggcaggcCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGGACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGc                <  2:7174559/150‑1 (MQ=255)
                                                                                                                                      ggcaggcCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTGCCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCa               >  1:3273124/1‑150 (MQ=255)
                                                                                                                                       gcaggcCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCAg              >  1:6394353/1‑150 (MQ=255)
                                                                                                                                       gcaggcCAAGTACAACCTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCAg              >  1:4925438/1‑150 (MQ=255)
                                                                                                                                       acaggcCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCAg              <  1:2548621/149‑1 (MQ=255)
                                                                                                                                        caggcCAAGTACAACCTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCAgg             <  1:1666103/150‑1 (MQ=255)
                                                                                                                                          ggcCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCAGGtt           >  2:6994887/1‑150 (MQ=255)
                                                                                                                                                gTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCAGGTTCAGTTc     >  2:3799334/1‑150 (MQ=255)
                                                                                                                                                  tGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCAGGTTCAGTTCgg   <  1:3639347/150‑1 (MQ=255)
                                                                                                                                                   gTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCAGGTTCAGTTCGgc  <  2:3747140/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CCGGCGTAACAAAATCCCCAGGTGCAACCGCGCACACGCATTGGTCTGCCCGTTGCCCAGCGCGTCGACAAGCAGGCGCCTGACCGCCAGCATGGCACTGCGCTCGTTCAGATCCTCATCGCCGTCCATGCGCAGGCAGGCCAGGTTGTACTTGGCCTGCCTGCTGCCCGCCTCCACCGCACGCTGCAGCCAGTACCCGGCTGCCTCGTCATCCAGGTAATGCGCCGGGGTGTTGGCCAGGCCGCCATGGTGCAGCTCATACAAGGCCAGGGCAGCACCCGGCAGGTTCAGTTCGGC  >  NC_002947/5971565‑5971861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑