Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 6,094,120 A→C 10.4% E189D (GAA→GAC)  PP_5343 → putative Transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,094,1200AC10.4% 750.4 / 2.7 258E189D (GAA→GAC) PP_5343putative Transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (188/28);  new base C (2/32);  total (190/68)
Fisher's exact test for biased strand distribution p-value = 1.72e-21
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 258 total aligned reads displayed.

AACCATGGAAAGTCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAGGCCTACC  >  NC_002947/6093972‑6094267
                                                                                                                                                    |                                                                                                                                                   
      ggAAAGTCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGa                                                                                                                                              <  2:3779021/150‑1 (MQ=255)
      ggAAAGTCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGa                                                                                                                                              <  2:1796188/150‑1 (MQ=255)
      ggAAAGTCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGa                                                                                                                                              <  2:494052/150‑1 (MQ=255)
        aaaGTCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAgc                                                                                                                                            >  2:6186801/1‑150 (MQ=255)
        aaaGTCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAgc                                                                                                                                            <  1:415394/150‑1 (MQ=255)
        aaaGTCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAgc                                                                                                                                            <  1:3597748/150‑1 (MQ=255)
          aGTCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTCTCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGACCCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAgcgc                                                                                                                                          >  2:5302631/1‑150 (MQ=255)
          aGTCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCACGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAgcgc                                                                                                                                          <  2:1180643/150‑1 (MQ=255)
            tCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTGGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCTCGCAAGCTCAGCCAGAACCGCTCCGGGCATGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCa                                                                                                                                        <  1:5538047/150‑1 (MQ=255)
            tCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCa                                                                                                                                        <  1:8042213/150‑1 (MQ=255)
            tCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCa                                                                                                                                        >  1:2412278/1‑150 (MQ=255)
            tCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCa                                                                                                                                        >  2:3683868/1‑150 (MQ=255)
              aCCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGc                                                                                                                                      >  2:8471752/1‑150 (MQ=255)
              aCCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGc                                                                                                                                      >  2:5957632/1‑150 (MQ=255)
               ccGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGcc                                                                                                                                     >  2:5803037/1‑150 (MQ=255)
               ccGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGcc                                                                                                                                     >  1:6113558/1‑150 (MQ=255)
                cGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGccc                                                                                                                                    >  2:1592274/1‑150 (MQ=255)
                       ccTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCaa                                                                                                                             >  1:925708/1‑150 (MQ=255)
                         tGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACt                                                                                                                           >  1:3318440/1‑150 (MQ=255)
                            cGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGa                                                                                                                        >  2:2879702/1‑150 (MQ=255)
                               cTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACaa                                                                                                                     >  2:8817793/1‑150 (MQ=255)
                                  cATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCa                                                                                                                  >  1:6873484/1‑150 (MQ=255)
                                   aTCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCaa                                                                                                                 >  2:5272267/1‑150 (MQ=255)
                                   aTCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCaa                                                                                                                 >  1:4732039/1‑150 (MQ=255)
                                         ggCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTcgcg                                                                                                           >  1:1333062/1‑150 (MQ=255)
                                         ggCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTcgcg                                                                                                           >  1:3549656/1‑150 (MQ=255)
                                           ctggccccGCGCCTTGGTGGGTTTCCGTCTCCCCCGCGCGCGCCTGCCGGGTGCGCGCAAGCCCACCCCCCCCCGCCCCGGGAAAGACAGGGGGGGTGTGCGCTACGGCCCGCGCGCCAGCCCCGATCAACTGGACAATCAACTCgcggc                                                                                                         <  2:166445/144‑1 (MQ=255)
                                             ggCTCCGCGCCTTGGTGTGTATCCGTCGCCCCTGCGCGCGCCTGCTTGGTGCGCGCACGCACCCCAAGACCCGCGCGGGGAAACACATGGGTGGTGTGCGCGCCGGCCTGCGCCCCAGCCCCGATCAACTGGACAATCAACTCGCGgcgc                                                                                                       <  2:7991503/149‑1 (MQ=255)
                                               cTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGcac                                                                                                     >  2:6298360/1‑150 (MQ=255)
                                               cTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGcac                                                                                                     >  2:7409462/1‑150 (MQ=255)
                                                tCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGcaca                                                                                                    >  2:3102818/1‑150 (MQ=255)
                                                  cgcgCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATg                                                                                                  >  1:3708191/1‑150 (MQ=255)
                                                    cgcCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATgcg                                                                                                >  1:9014770/1‑150 (MQ=255)
                                                       cATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCa                                                                                             >  1:4302270/1‑150 (MQ=255)
                                                        agggtcgTTATCGGTCTGCCCAGCGCGCGCCCGATGGGGGCGCGCACGCCCAGCACGAACCGCCCCGTCCAAGACTGCGGTGGTGTGCGCGCCGGCCGGCCCCCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCaa                                                                                            <  2:1932515/147‑1 (MQ=255)
                                                          ggtgggTATCCGTCTGCCCATCGCGCGCCTGCTTGGTGCGCGAACGCTCAGCCAGAACCGCTCCGGTAAATACATCGGTGGTGTGCGCGAAGGCCTGCGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAAct                                                                                          <  2:3166141/146‑1 (MQ=255)
                                                          ggtcgTTCTCCGTGTGCCCCGCGCGCGCCTGCACGGGGCGCCCACCCGCAGCAAGACCCGCGCCGGCCAATACATGGCTGGTGTGGGCGCCGGCCTCCCCCCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCATGTGCGccgcga                                                                                          <  2:1336244/149‑5 (MQ=255)
                                                             cgGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTg                                                                                       >  1:1128331/1‑150 (MQ=255)
                                                              ggTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGa                                                                                      >  2:277026/1‑150 (MQ=255)
                                                               tttccggTCGGCCCTTCGGGCGCGTGCTTGGGGCGCCCAAGCACAGCCAGAACCGCTGGGTTAAATTCTTGGGGGGTGTGCGCGAGGGCCTGAGCCCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGaa                                                                                     <  2:675130/144‑1 (MQ=255)
                                                                 ttCCTTCTGCCCAGCGCGCGCCTGCTTGGTGCGCGCACGCTCAGCCATAACGGCTCGGTGAAATACATGGGTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAgg                                                                                   <  2:8359088/149‑1 (MQ=255)
                                                                 aTCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAgg                                                                                   >  2:824130/1‑150 (MQ=255)
                                                                 aTCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAgg                                                                                   >  1:2218287/1‑150 (MQ=255)
                                                                  tcggTCTGCCCCTGGCGCGCCGGCACGGGGCGCGAACGAACACCCACCCCCGCTGCGGGAAACACATCTGTGGTGGGCGCGACGGCCGGCGCCCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGa                                                                                  <  2:635912/147‑1 (MQ=255)
                                                                         gCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGccc                                                                           >  1:8725317/1‑150 (MQ=255)
                                                                         gCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGccc                                                                           >  1:9063485/1‑150 (MQ=255)
                                                                          cccATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCa                                                                          >  2:3940763/1‑150 (MQ=255)
                                                                           ccATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCAt                                                                         >  1:6454817/1‑150 (MQ=255)
                                                                            cATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATg                                                                        >  1:5452731/1‑150 (MQ=255)
                                                                             aTCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGc                                                                       >  2:4323126/1‑150 (MQ=255)
                                                                             aTCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCAAGc                                                                       >  2:2403584/1‑150 (MQ=255)
                                                                                gcgcgcCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCa                                                                    >  2:8258454/1‑150 (MQ=255)
                                                                                 ggcggCTGGACGGTGCGCGCAAGCTCAGCCAGTCGCGCTCCGGGCCCGGCCGGGGGGGTGGGCGCGCCGGCCCGCCCCCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCaa                                                                   <  1:3461934/149‑1 (MQ=255)
                                                                                       tGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTAc                                                             >  2:2276724/1‑150 (MQ=255)
                                                                                       tGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTAc                                                             >  2:5219285/1‑150 (MQ=255)
                                                                                       tGCAAGGTGCGCGCAAGCTCAACCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTAc                                                             >  1:2556932/1‑150 (MQ=255)
                                                                                             gTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTgcg                                                       >  1:829011/1‑150 (MQ=255)
                                                                                                 gcgcccgCTCCGCCAGACCCGCTCGGGGCATGAGCGGGGGGGGGGGCGCGCCGGCCTGCGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCt                                                   <  2:2391451/144‑1 (MQ=255)
                                                                                                 gcgcAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGACTAGCCCATGCCCAACCTTACCCTGCGCCCt                                                   >  2:9089623/1‑150 (MQ=255)
                                                                                                 gcgcAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCt                                                   >  2:5669639/1‑150 (MQ=255)
                                                                                                   gcAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGt                                                 >  1:311633/1‑150 (MQ=255)
                                                                                                         tCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACCATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGc                                           >  2:6324402/1‑150 (MQ=255)
                                                                                                         tCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGACTAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGc                                           >  2:5349113/1‑150 (MQ=255)
                                                                                                         tCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGc                                           >  1:4432554/1‑150 (MQ=255)
                                                                                                            gCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCa                                        >  2:3032816/1‑150 (MQ=255)
                                                                                                             ccAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCaa                                       >  1:2668904/1‑150 (MQ=255)
                                                                                                             ccAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCaa                                       >  2:6897081/1‑150 (MQ=255)
                                                                                                               aGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGa                                     >  1:2091530/1‑150 (MQ=255)
                                                                                                               aGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGa                                     >  1:6627636/1‑150 (MQ=255)
                                                                                                               aGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGa                                     >  2:7087111/1‑150 (MQ=255)
                                                                                                               aGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGa                                     >  2:7233211/1‑150 (MQ=255)
                                                                                                               aGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGa                                     >  2:7468733/1‑150 (MQ=255)
                                                                                                               aGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGa                                     >  1:301518/1‑150 (MQ=255)
                                                                                                                 ccccGCTCGGGGCAAGACTTGTGGGGGGTGGGCGCCGGCCCCAGCCCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATc                                   <  1:6022619/148‑1 (MQ=255)
                                                                                                                      cTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCaagat                              >  1:2808810/1‑146 (MQ=255)
                                                                                                                      cTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCa                              >  2:4505925/1‑150 (MQ=255)
                                                                                                                         cGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGcc                           >  2:8877561/1‑150 (MQ=255)
                                                                                                                             cAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGc                       >  2:1831087/1‑150 (MQ=255)
                                                                                                                              aaGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCa                      >  1:5370666/1‑150 (MQ=255)
                                                                                                                              aaGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCa                      >  1:860328/1‑150 (MQ=255)
                                                                                                                                gACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGACTAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACg                    >  1:8482727/1‑150 (MQ=255)
                                                                                                                                gACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACg                    >  1:4468274/1‑150 (MQ=255)
                                                                                                                                gACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACg                    >  2:204416/1‑150 (MQ=255)
                                                                                                                                    tCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCt                >  2:7722846/1‑150 (MQ=255)
                                                                                                                                    tCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCt                >  1:4128997/1‑150 (MQ=255)
                                                                                                                                    tCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCt                >  1:8735531/1‑150 (MQ=255)
                                                                                                                                     ggggggTGTGCGCCAGGCCCCGCCCCCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCtt               <  1:6970177/146‑1 (MQ=255)
                                                                                                                                      gggggTGTGCGCGTCGGCCGGCGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCttt              <  2:6577734/147‑1 (MQ=255)
                                                                                                                                       ggggTGTGCGCTACGGCCGGCCCCCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTg             <  2:4900645/148‑1 (MQ=255)
                                                                                                                                       cTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTg             >  1:2339213/1‑150 (MQ=255)
                                                                                                                                        tGGTGTGCGCTTTGGCCTGCGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTgg            <  2:3693846/150‑1 (MQ=255)
                                                                                                                                           ggggcgcgcCGGCCTGCGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAg         <  2:3239843/147‑1 (MQ=255)
                                                                                                                                             tgCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAGGc       >  1:7499599/1‑150 (MQ=255)
                                                                                                                                               cgcgATGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAGGCCt     <  2:8059203/150‑1 (MQ=255)
                                                                                                                                               cgcgAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAGGCCt     >  2:8637479/1‑150 (MQ=255)
                                                                                                                                                gcgAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAGGCCTa    >  2:4643538/1‑150 (MQ=255)
                                                                                                                                                gcgAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAGGCCTa    >  1:7188841/1‑150 (MQ=255)
                                                                                                                                                 cgACGGCCCGCGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAGGCCTAc   <  2:2643227/150‑1 (MQ=255)
                                                                                                                                                  gAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAGGCCTAcc  >  2:4401389/1‑150 (MQ=255)
                                                                                                                                                  gAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAGGCCTAcc  >  1:4647866/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AACCATGGAAAGTCACCGACGCCCCTGCCGACTACATCGAGGGCATGCTCCGCGCCATCGTCGGTATCCGTCTGCCCATCGCGCGCCTGCAAGGTGCGCGCAAGCTCAGCCAGAACCGCTCCGGGCAAGACATCGCTGGTGTGCGCGAAGGCCTGAGCGCCAGCCCCGATCAACTGGACAATCAACTCGCGGCGCACATGCGCCAACTCTGAAGGAATAGCCCATGCCCAACCTTACCCTGCGCCCTGTCACGGCCCAAGATCACGCAGCCTGGCACGCCCTTTGGCAGGCCTACC  >  NC_002947/6093972‑6094267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑