BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	532,619	G→C	5.2%	noncoding (35/76 nt)	PP_t03 →	tRNA‑Thr

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	532,619	0	G	C	5.2%	1042.1 / 32.4	310	noncoding (35/76 nt)	PP_t03	tRNA‑Thr
Reads supporting (aligned to +/- strand): ref base G (138/155); new base C (10/6); total (148/162)
Fisher's exact test for biased strand distribution p-value = 3.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01

Only 100 of 313 total aligned reads displayed.

CCGCAAGCTCCGCGGGTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTGATCGTTCCCTT  >  NC_002947/532471‑532768

ccGCAAGCTCCGCGGGTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGt                                                                                                                                                      <  1:4150167/150‑1 (MQ=255)

 cGCAAGCTCCGCGGGTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTa                                                                                                                                                     >  2:4631399/1‑150 (MQ=255)

    aaGCTCCGCGGGTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAgg                                                                                                                                                  <  2:1829357/150‑1 (MQ=255)

    aaGCTCCGCGGGTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAgg                                                                                                                                                  >  1:6206816/1‑150 (MQ=255)

     aGCTCCGCGGGTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAggg                                                                                                                                                 <  1:5332052/150‑1 (MQ=255)

        tCCGCGGGTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGa                                                                                                                                              <  1:7237419/150‑1 (MQ=255)

         ccGCGGGTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAg                                                                                                                                             <  2:8983000/150‑1 (MQ=255)

          cgcgGGTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTACCAAGGGTgtgc                                                                                                                                            <  2:7568911/150‑4 (MQ=255)

              ggTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAg                                                                                                                                        <  1:5518237/150‑1 (MQ=255)

                           ggTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCg                                                                                                                           <  2:3412368/150‑1 (MQ=255)

                            gTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGc                                                                                                                          <  1:965010/150‑1 (MQ=255)

                            gTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGc                                                                                                                          >  1:8730374/1‑150 (MQ=255)

                            gTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGc                                                                                                                          >  2:8253749/1‑150 (MQ=255)

                            gTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGc                                                                                                                          >  2:8558252/1‑150 (MQ=255)

                             tAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCt                                                                                                                         >  1:373249/1‑150 (MQ=255)

                             tAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCACTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCt                                                                                                                         >  1:4636512/1‑150 (MQ=255)

                              aGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTc                                                                                                                        >  2:5856783/1‑150 (MQ=255)

                                aaCCTCAGCCTTCCAAGCGGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTGTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCaa                                                                                                                      <  2:3637468/150‑1 (MQ=255)

                                  ccTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAaga                                                                                                                    <  1:1901731/150‑1 (MQ=255)

                                  ccTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAaga                                                                                                                    >  2:4995155/1‑150 (MQ=255)

                                   cTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAagag                                                                                                                   <  2:6595784/150‑1 (MQ=255)

                                    tCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGc                                                                                                                  >  1:5192191/1‑150 (MQ=255)

                                        ccTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCa                                                                                                              >  2:1464354/1‑150 (MQ=255)

                                          ttCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCata                                                                                                            >  1:8366124/1‑150 (MQ=255)

                                            ccAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCAtata                                                                                                          <  1:3835734/150‑1 (MQ=255)

                                             cAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCatatct                                                                                                         <  2:606385/150‑3 (MQ=255)

                                              aaGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATaaa                                                                                                        >  2:2589986/1‑150 (MQ=255)

                                                gCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACa                                                                                                      >  2:4830216/1‑150 (MQ=255)

                                                 cTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACaa                                                                                                     <  1:7953986/150‑1 (MQ=255)

                                                 cTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACaa                                                                                                     <  1:1064273/150‑1 (MQ=255)

                                                  tgatgaTGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAg                                                                                                    >  2:3756473/1‑150 (MQ=255)

                                                   gatgatGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAgg                                                                                                   <  2:3506402/150‑1 (MQ=255)

                                                   gatgatGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAgg                                                                                                   <  1:2615536/150‑1 (MQ=255)

                                                   cctgccgCGGGTTCGATTCCCGCTACCCGCTCCAACTTTGGCGGATTGTGCACAAAGTGTTTCGCACTTGTAGGTCAGTTGGTAGATCACAGCGTTGGTAAGGGTGAGGTCAGCGGTTGTTGTCCTCTAAAGAGCTGCTGATAAACAAgg                                                                                                   <  2:8710775/144‑1 (MQ=255)

                                                      gatgCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAg                                                                                                >  1:3974272/1‑150 (MQ=255)

                                                         gCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGata                                                                                             <  1:3532318/150‑1 (MQ=255)

                                                             gTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGaa                                                                                         >  2:1537699/1‑150 (MQ=255)

                                                              ttCGATTCCCGCTACCCGCGCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGaaa                                                                                        >  2:2013560/1‑150 (MQ=255)

                                                                cGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGGTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAat                                                                                      >  2:422769/1‑150 (MQ=255)

                                                                   ttCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATc                                                                                   <  2:1594640/150‑1 (MQ=255)

                                                                   ttCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATc                                                                                   >  1:1759558/1‑150 (MQ=255)

                                                                      ccGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGc                                                                                >  2:6477559/1‑150 (MQ=255)

                                                                      ccGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGc                                                                                >  2:5392346/1‑150 (MQ=255)

                                                                       cGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGcc                                                                               <  2:2086915/150‑1 (MQ=255)

                                                                        gCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCCTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCt                                                                              <  1:2321594/150‑1 (MQ=255)

                                                                           aCCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTg                                                                           <  2:2503356/150‑1 (MQ=255)

                                                                            cccGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGt                                                                          <  1:5376714/150‑1 (MQ=255)

                                                                            cccGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGt                                                                          >  1:6369060/1‑150 (MQ=255)

                                                                             gcgcgCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGtt                                                                         >  2:1188273/2‑150 (MQ=255)

                                                                             ccGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGtt                                                                         >  1:6633396/1‑150 (MQ=255)

                                                                              cGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGttt                                                                        >  1:4393509/1‑150 (MQ=255)

                                                                                cTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGa                                                                                                                                              <  2:7636993/78‑1 (MQ=255)

                                                                                cTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTa                                                                      >  2:390731/1‑150 (MQ=255)

                                                                                cTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTa                                                                      >  2:4386500/1‑150 (MQ=255)

                                                                                cTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTa                                                                      <  1:5630242/150‑1 (MQ=255)

                                                                                cTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATAAACCAAAGGCAGATATTTTCATATCTGCCttgtttata                                                                      <  1:6943197/150‑8 (MQ=38)

                                                                                    aaGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATg                                                                                           >  2:2815593/1‑125 (MQ=255)

                                                                                     aGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGt                                                                 <  2:7834053/150‑1 (MQ=255)

                                                                                          gTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAAAAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAg                                                            >  1:1163343/1‑150 (MQ=255)

                                                                                           tCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGa                                                           >  1:2765602/1‑150 (MQ=255)

                                                                                           tCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGa                                                           >  2:3195721/1‑150 (MQ=255)

                                                                                           tCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGa                                                           >  1:5032162/1‑150 (MQ=255)

                                                                                           tCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGa                                                           >  1:697486/1‑150 (MQ=255)

                                                                                              gATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTa                                                        <  1:4040927/150‑1 (MQ=255)

                                                                                               aTTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTAt                                                       <  2:8550345/150‑1 (MQ=255)

                                                                                                      acaAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTtcttct                                                <  2:7247847/150‑1 (MQ=255)

                                                                                                       caAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTg                                               <  1:8322471/150‑1 (MQ=255)

                                                                                                        aaaGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGc                                              >  1:7395007/1‑150 (MQ=255)

                                                                                                         aaGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCg                                             <  1:1849054/150‑1 (MQ=255)

                                                                                                         aaGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCg                                             <  1:4568412/150‑1 (MQ=255)

                                                                                                               ttCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGAt                                       >  1:3240878/1‑150 (MQ=255)

                                                                                                                tCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACACGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGAtt                                      <  2:6694975/150‑1 (MQ=255)

                                                                                                                  gCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGAGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGt                                    >  2:6877587/1‑150 (MQ=255)

                                                                                                                    tctTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTAt                                  <  1:9024482/150‑1 (MQ=255)

                                                                                                                      ttGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCg                                <  2:8897246/150‑1 (MQ=255)

                                                                                                                         tAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATg                             >  1:1946493/1‑150 (MQ=255)

                                                                                                                          aGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATgg                            <  2:1324226/150‑1 (MQ=255)

                                                                                                                            cTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCt                          >  2:6967049/1‑150 (MQ=255)

                                                                                                                             tCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTa                         >  1:4731322/1‑150 (MQ=255)

                                                                                                                             tCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTa                         >  2:1541072/1‑150 (MQ=255)

                                                                                                                             tCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTa                         >  1:7744096/1‑150 (MQ=255)

                                                                                                                                gTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATTTTCATATCTGcc                                                                               >  2:3981602/1‑93 (MQ=39)

                                                                                                                                   ggTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCgga                                           <  2:4699462/126‑1 (MQ=255)

                                                                                                                                    gTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGaaaa                  <  2:6206816/150‑1 (MQ=255)

                                                                                                                                    gTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGaaaa                  <  1:4870473/150‑1 (MQ=255)

                                                                                                                                    gTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGaaaa                  <  2:5187691/150‑1 (MQ=255)

                                                                                                                                    gTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGaaaa                  <  1:300150/150‑1 (MQ=255)

                                                                                                                                    gTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGaaaa                  >  2:8118881/1‑150 (MQ=255)

                                                                                                                                       gagCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGACAAGtt               >  1:2147736/1‑150 (MQ=255)

                                                                                                                                       gacctcacCCTTACCAAGGGTGTGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCACGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGtt               >  1:8231708/6‑150 (MQ=255)

                                                                                                                                        agCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGttt              <  1:8558252/150‑1 (MQ=255)

                                                                                                                                         gCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTg             >  1:5131582/1‑150 (MQ=255)

                                                                                                                                          cacaCCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTGa            <  1:1500416/150‑1 (MQ=255)

                                                                                                                                           tcacCCTTACCAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTGAt           >  2:21721/2‑150 (MQ=255)

                                                                                                                                           tcacCCTTACCAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTGAt           >  2:7400896/2‑150 (MQ=255)

                                                                                                                                            cacCCTTACCAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTGATc          >  2:8769016/1‑150 (MQ=255)

                                                                                                                                               ccTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAGGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTGATCGtt       <  1:755572/150‑1 (MQ=255)

                                                                                                                                                cTTGGTACGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGAGATGAACATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTGATCGttc      <  2:5647322/150‑1 (MQ=255)

                                                                                                                                                 ttGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTGATCGttcc     <  2:2399691/150‑1 (MQ=255)

                                                                                                                                                    gTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTGATCGttccctt  >  2:9144394/1‑150 (MQ=255)

CCGCAAGCTCCGCGGGTATAGTTTAGTGGTAGAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTACCCGCTCCAAGTTTGTCGGATTTTGCACAAAGTGTTTCGCTCTTGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAAGTCCGCTCAAGAGCTCCATATAAACAAGGCAGATATGAAAATATCTGCCTTTGTTTTATCAGTGCAAGACTATTTCTTCTGCGGAGGATTGTATCGATGGCTAAGGAAAAGTTTGATCGTTCCCTT  >  NC_002947/532471‑532768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`