| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 85,088 | C→A | 5.1% | intergenic (+66/+64) | aroE → / ← PP_0075 | shikimate 5‑dehydrogenase/choline sulfate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 85,088 | 0 | C | A | 5.1% | 880.3 / 23.9 | 263 | intergenic (+66/+64) | aroE/PP_0075 | shikimate 5‑dehydrogenase/choline sulfate transporter |
| Reads supporting (aligned to +/- strand): ref base C (120/129); new base A (8/6); total (128/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 275 total aligned reads displayed.
GAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGG > NC_002947/84939‑85237 | gAAGCCTTCTTTATCTGGTGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGc > 2:7735384/1‑150 (MQ=255)gAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGc > 2:4689159/1‑150 (MQ=255) gCCTTCTTTATCTGGCGTGGCGTGGGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGa > 2:3417620/1‑150 (MQ=255) ccTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGAt > 2:6861898/1‑150 (MQ=255) ttcttTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCGAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATcc > 2:5951832/1‑150 (MQ=255) ttcttTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAATGCCGGTCCC‑ACAAAGTA‑CGTCGTACGCCGATcc > 1:3276864/1‑150 (MQ=255) ttcttTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATcc > 2:6111866/1‑150 (MQ=255) cttTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGTCTGCTTTGCAGCCC‑ATCGCGACGCAAGGCCGCTCCC‑ACAGAGGATCGGCGTacgacgtacttt < 2:8668003/150‑7 (MQ=18) tttATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGTGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCctct < 2:4003339/150‑1 (MQ=255) tttATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAACGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCCATCcact > 1:6998111/1‑150 (MQ=255) tATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCtgt < 1:6821254/150‑1 (MQ=255) tATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCtgt < 1:4044953/150‑1 (MQ=255) tCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTgg < 2:2420324/150‑1 (MQ=255) tCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTgg > 2:5381385/1‑150 (MQ=255) tggcgtggcgTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGa < 1:7041189/150‑1 (MQ=255) tggcgtggcgTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGa < 1:7970689/150‑1 (MQ=255) tggcgtggcgTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGa < 2:4774422/150‑1 (MQ=255) ggcgtggcgtGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTTGCAGCCC‑ATCGCGACGCAAGGCCGCTCCC‑ACAGAGGATCGGCGTACGACG‑TACTTTGTGGGaac < 2:4728729/150‑3 (MQ=18) ggcgtggcgtGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAg < 2:2789130/150‑1 (MQ=255) gcgtggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGc > 2:6551557/1‑150 (MQ=255) gcgtggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGCTCCC‑ACAGAGGATCGGCGTACGACG‑TACTTTGTGGGaac < 1:2666426/150‑3 (MQ=25) gtggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGTCGGCTTTGCAGCCC‑AGCGCGACGCAAGGCCACTCCC‑ACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGc < 2:6539766/150‑1 (MQ=12) ggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGcc < 2:7250847/150‑1 (MQ=255) gcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGCTCCC‑ACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCt < 2:7072938/150‑1 (MQ=21) tgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGc < 1:2919430/150‑1 (MQ=255) gCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTcg > 2:3248618/1‑150 (MQ=255) gCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCACACTGGGCGCGGCCTTgcggcg > 2:8007784/1‑150 (MQ=39) ggATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGCCGCAAGGCCGGGCCC‑CCAAAGTA‑CGTCGTACGCCGAGCCGCAGTGGGGGCGGCCGTGCGTcgcgg > 1:171826/1‑149 (MQ=255) gATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGAt < 2:5433144/150‑1 (MQ=255) tACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCGGGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATgg < 1:1306999/150‑1 (MQ=255) tgtgGGCTGAACGGCGCCGGCACCTCGCTCGGGGCGGCGCTGGCCGGGGCCGCTGGGCGGCCCTATCGCGCCGCAAGGCCGGCCCC‑ACAAAGTA‑CGGCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCa < 2:259952/150‑1 (MQ=38) tgtTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAACTTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCTTCGCGATGGGCTGCAAAGCa < 2:1897672/150‑1 (MQ=255) gCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGAccc > 2:679359/1‑150 (MQ=255) tGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGGCGCGGTGGGCTGCAAAGCAGACCCAg > 2:8428196/1‑150 (MQ=255) aCTGCGCCGGCAACTCGCTCGGGGCTGAGGTGGCCGGGGCCGCTGGGCGGCCCTATCGCGACGCACGGCCGTTCCC‑CCAACGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAAt < 2:90609/150‑1 (MQ=39) aCTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTGGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAAt < 2:174681/150‑1 (MQ=255) cgcCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCa < 2:5249350/150‑1 (MQ=255) gCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGGCGCAAGGCCGGTCCC‑CCAAAGTA‑ACTCGTACGCCGCTCCTCGGTGGGGGCGGCCGTGCGTCGCCATGGGCTGCAAAGCAGACCCACAAaaccaaccgc > 1:6390125/1‑148 (MQ=255) aaCTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCAt > 1:2992586/1‑150 (MQ=255) aCTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCAtt < 2:1166906/150‑1 (MQ=255) aCTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCACAtt > 2:8929950/1‑150 (MQ=255) tcgctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGGTACC‑ACAAAGTA‑CGTCGTACGCCCATCCGCGGTGGGAGCGGCCGTGGGGCGCGATGGGGTGCAAAGCAGACCCACAAACCCAACcacaatac > 1:4797985/1‑146 (MQ=37) gctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCCTTGCC‑ACAAAGTA‑CGTCGTACGCCCATCCACTGTGGGGGCGGCCTTGCGGCGCGATGGGCTGCAAAGCAGACCCAGAAACCCCACCACATTccac > 1:5566841/1‑148 (MQ=255) tcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCAt > 2:7493130/1‑143 (MQ=255) tcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCAt < 1:7493130/143‑1 (MQ=255) gggggCTGTGCTGGCGGGGGCGGCTTGGCGGCCCTATGGCGACGCAAGG‑CGTTCCCAACAAAGTA‑GGTCTTCGGCCGTGCCTGTGGGGGTGCGGCCTGGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCaaa < 1:248448/149‑1 (MQ=255) cTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCACGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCACACCGGATCggg < 2:8042663/150‑1 (MQ=255) ggCGGGGGCCGCTTGGGGGCCCTATCGCGACGCAAGGCGGTTCCC‑ACAAAGAC‑CGTCGTACGCCTATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGca < 1:524825/150‑1 (MQ=39) ggCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCGGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGcc > 1:5249901/1‑149 (MQ=255) ccGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAAAACCAACCTCATTCCTCAAACCGGATCGGGcaca > 1:6681306/1‑150 (MQ=255) ggcggCCGCGTGGCGGCCCTAACGCGCCGCAAGGCCGTTCCC‑CCAACCCC‑CGTCGTACGCCGCTCCTCCGGGGGAGCGGCCTCGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCCAACCGGCTCGGGcacac < 2:8250409/147‑2 (MQ=255) gCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACCAAGTA‑CGTCGTAAGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCGGCAAAGCAGACCCAGAATCCCAACCACATTCCTCAAACCGGATCGGGCACAACGcc > 1:7377715/1‑150 (MQ=255) gCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTcc < 2:3707598/150‑1 (MQ=255) gCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTAAGCCGATCCTCTGTGGGAGCGGCCGTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCACAATCCTCAAACCGGATAGGGCACAACTcc > 1:5911595/1‑150 (MQ=39) gCCGCTTGGCGGCCCTATCGAGACGCAAGGCCGTTCCC‑ACAAACTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCATGCGTCCCGATGGGCTGCAAAGCCGACCCAGAATCACCACCCCATTCATCAAACACGGTCGGGCCCAACGcc > 2:3333531/1‑150 (MQ=255) cggttGGGGGCCCTATCGCGACTCATGGCCTTTCCA‑AAAAATTA‑CGTGTTACGCCGATCCTGTGTGGGAGGGGCCTTGGGCCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc < 1:8689723/147‑1 (MQ=255) cGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc < 2:2161977/150‑1 (MQ=255) cGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc > 2:567712/1‑150 (MQ=255) ggccccTTTGGCGACGCATGGCGTTTCCA‑AAAATTTA‑GGTGGTACGCGTATCATGGGTGGGTGGGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTcc < 1:8433814/147‑1 (MQ=255) cggcCCTATCGCGACGCACGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTcc < 1:6036535/150‑1 (MQ=255) cccTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGc < 2:5098685/150‑1 (MQ=255) ccTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCt > 2:5326342/1‑150 (MQ=255) aTCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGGGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCt < 1:2012743/150‑1 (MQ=255) tCGCGCCGCACGGCCGTTCCC‑ACAAAGTA‑GGTCGTACGCCGAGCCTCTGTGGGTGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTg < 1:5724016/150‑1 (MQ=39) cgcgACGAATGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCGGTGGGAGGGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGc < 1:4950815/150‑1 (MQ=255) gcgACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCATCCAGCTTCTGCa > 1:2425516/1‑150 (MQ=255) gCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAActcc > 1:5592663/1‑150 (MQ=255) gCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAActcc > 2:687992/1‑150 (MQ=255) gCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAActcc > 1:6240727/1‑150 (MQ=255) aaGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAActcatc > 1:5212324/1‑150 (MQ=255) tgCCGTTCCC‑ACAAAGTA‑CGTCTTTCGCCGATCCTCTTTGGTTGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGa < 1:3732879/149‑1 (MQ=255) ggCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGa < 2:8104801/150‑1 (MQ=255) gCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAActcctc < 2:7225919/147‑1 (MQ=255) gCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGAt > 1:4413042/1‑150 (MQ=255) gCCGCTCCC‑ACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGAt > 2:4392812/1‑150 (MQ=21) cctttacc‑AAAATGTA‑CGTCTTACGCCTATACTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATc < 1:4767689/144‑1 (MQ=38) ccGCTCCC‑ACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATc > 2:6483139/1‑150 (MQ=21) gTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCAc > 1:8963071/1‑150 (MQ=255) gTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCAc > 2:1367269/1‑150 (MQ=255) tCCC‑ACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCt > 2:579337/1‑150 (MQ=25) cc‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGc > 2:4523642/1‑150 (MQ=255) c‑acaACGTC‑CGTGGTACGCCGATCCTCGGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCg < 1:1066657/150‑1 (MQ=255) c‑acaAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCg < 1:687992/150‑1 (MQ=255) c‑acaAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCg > 2:3751334/1‑150 (MQ=255) c‑acaAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCg > 2:2825022/1‑150 (MQ=255) caaaaaGTA‑CGTCGTACGCCTATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCg < 1:6960331/147‑1 (MQ=255) acaAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCgg > 1:8042486/1‑150 (MQ=255) caAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGc < 2:6264000/150‑1 (MQ=255) aaaGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGcc > 2:3107954/1‑150 (MQ=255) tA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGc > 2:3815666/1‑150 (MQ=255) tA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGc > 1:5310368/1‑150 (MQ=255) gtcgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCg > 1:9133843/1‑150 (MQ=255) gtcgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCg < 2:8775611/150‑1 (MQ=255) gtcgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCg < 2:4298385/150‑1 (MQ=255) tcgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCgg < 1:4493468/150‑1 (MQ=255) tcgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCgg > 1:4657193/1‑150 (MQ=255) cgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGt < 2:1457279/150‑1 (MQ=255) cgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGt < 1:4689159/150‑1 (MQ=255) gCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAg < 2:668595/150‑1 (MQ=255) ccGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAgg < 2:447411/150‑1 (MQ=255) | GAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCC‑ACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGG > NC_002947/84939‑85237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |