| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 541,516 | C→T | 5.7% | G1297G (GGC→GGT) | rpoB → | DNA‑directed RNA polymerase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 541,516 | 0 | C | T | 5.7% | 1213.8 / 38.8 | 383 | G1297G (GGC→GGT) | rpoB | DNA‑directed RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): ref base C (193/168); new base T (16/6); total (209/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 403 total aligned reads displayed.
TCAAGCTGAACCACTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCAAAGAGATCCGTT > NC_002947/541368‑541664 | tCAAGCTGAACCACTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGgcg > 2:6212277/1‑150 (MQ=255)tCAAGCTGAACCACTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGgcg > 1:8522605/1‑150 (MQ=255)tCAAGCTGAACCACTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGgcg > 1:3785642/1‑150 (MQ=255)tCAAGCTGAACCACTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGgcg > 1:7789212/1‑150 (MQ=255) gctccaccaccTGGTCGACGACAAGATCCATGCTCGTTCGATCGGACCTTACTCGCTCGTCACCCAGCAGCCGCTCGGTGGTAAGGCGCAGTTCGGTGGTCAGCGCTTCGGCGAAATGGAGGTCTGGGCTCTGGAAGCATATGGTGCGGc > 1:6668459/6‑150 (MQ=255) gctccaccaccTGGTCGACGACAAGATCCATGCTCGTTCGATCGGACCTTACTCGCTCGTCACCCAGCAGCCGCTCGGTGGTAAGGCGCAGTTCGGTGGTCAGCGCTTCGGCGAAATGGAGGTCTGGGCTCTGGAAGCATATGGTGCGGc > 1:4051459/6‑150 (MQ=255) tccaccaccTGGTCGACGACAAGATCCATGCTCGTTCGATCGGACCTTAATCGCTCGTCACCCAGCAGCCGCTCGGTGGTAAGGCGCAGTTCGGTGGTCAGCGCTTAGGCGAAATGGAGGTCTGGGCTCTGGAAGCATATGGTGCGGctt > 1:6903319/4‑148 (MQ=255) tGAACCACTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCAt > 2:4197216/1‑150 (MQ=255) aaCCACTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATac > 2:4734064/1‑150 (MQ=255) ccACTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATacac > 1:2228825/1‑150 (MQ=255) aCTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACAccc > 2:523836/1‑150 (MQ=255) cTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCt < 1:4019349/150‑1 (MQ=255) ttGGTGGACGACAAGATTAACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCATCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTg > 2:5655965/1‑150 (MQ=255) ttGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTg > 2:7151913/1‑150 (MQ=255) tggtggACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGc < 2:194414/150‑1 (MQ=255) gtggACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCaa > 2:7594453/1‑150 (MQ=255) tggACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAg > 1:2516907/1‑150 (MQ=255) tggACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAg > 1:3753400/1‑150 (MQ=255) tggACGACAAGATGCACGCGCGTTCCACTGGGTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAg < 2:6370614/150‑1 (MQ=255) ggACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGa > 1:3338990/1‑150 (MQ=255) ggACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGa > 1:8818331/1‑150 (MQ=255) gacAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTGGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATg > 2:3418845/1‑150 (MQ=255) gacAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATg > 2:5797150/1‑150 (MQ=255) aaGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTc > 1:6322750/1‑150 (MQ=255) aaGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTc > 2:760724/1‑150 (MQ=255) gATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTcac > 1:7107136/1‑150 (MQ=255) gCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGt < 1:5219657/150‑1 (MQ=255) cgcgcgTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGaa < 1:193395/150‑1 (MQ=255) gcgcgTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAg > 2:8259338/1‑150 (MQ=255) gcgcgTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAg < 1:1811890/150‑1 (MQ=255) aCTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGgacgac < 1:3305635/150‑1 (MQ=255) tGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTg < 2:1170391/118‑1 (MQ=255) tGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTg > 1:1170391/1‑118 (MQ=255) tGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGt < 2:3782264/150‑1 (MQ=255) gTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGa > 2:3055095/1‑150 (MQ=255) gTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGa > 2:3125031/1‑150 (MQ=255) ttCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGac > 2:7072990/1‑149 (MQ=255) ccTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTCCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACg > 1:1567995/1‑150 (MQ=255) tACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCgg < 1:6087858/100‑1 (MQ=255) tACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGc > 1:2403119/1‑150 (MQ=255) tACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGc > 1:8465931/1‑150 (MQ=255) tACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGc > 2:5202530/1‑150 (MQ=255) tACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGc > 2:4262514/1‑150 (MQ=255) aCAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGTAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGcc < 2:2375074/150‑1 (MQ=255) ccTGGATACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGtcc > 2:7621363/1‑148 (MQ=255) ttaccaCCCAGCGGCTGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGga < 1:446463/125‑1 (MQ=255) ttACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGa > 2:3375791/1‑150 (MQ=255) ccaCCCAGCGGCTGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGa > 1:7651117/3‑150 (MQ=255) tACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGAt < 1:3480959/150‑1 (MQ=255) tACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGAt < 1:8240380/150‑1 (MQ=255) tACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGAt < 2:1596525/150‑1 (MQ=255) caCCCAGCGGCTGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTc < 2:1106824/122‑1 (MQ=255) caCCCAGCGGCTGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTc > 1:1106824/2‑123 (MQ=255) caCCCAGCGGCTGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTATCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGAt > 2:1789652/2‑150 (MQ=255) aCCCAGCGGCTGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATg > 1:8672189/1‑150 (MQ=255) aCCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATg > 2:7397052/1‑150 (MQ=255) ccAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTa > 1:7383189/1‑150 (MQ=255) ccAGCAGCCGCTCGGTGGTAAGGCGCAGTTCGGTGGTCAGCGCTTCGGCGAAATGGAGGTCTGGGCTCTGGAAGCATATGGTGCGGCTTACACGCTGCAGGAAATGCTTACAGTCAAGTCGGACGACGTTGCAGGCCGTACCAAggtcta < 1:8872330/150‑6 (MQ=255) ccAGCAGCCGCTCGGTGGTAAGGCGCAGTTCGGTGGTCAGCGCTTCGGCGAAATGGAGGTCTGGGCTCTGGAAGCATATGGTGCGGCTTACACGCTGCAGGAAATGCTTACAGTCAAGTCGGACGACGTTGCAGGCCGTACCAAggtcta > 1:6233464/1‑145 (MQ=255) cagcagCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTAc > 2:6005993/1‑150 (MQ=255) gcagcCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACaa < 2:1408942/150‑1 (MQ=255) gcagcCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACaa < 1:4843653/150‑1 (MQ=255) cGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACa > 1:99118/1‑150 (MQ=255) cTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATc < 2:8134325/150‑1 (MQ=255) ggtggtAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTg < 2:3617291/150‑1 (MQ=255) ggtAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGAt < 1:5781403/150‑1 (MQ=255) tAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATgg > 2:2972675/1‑150 (MQ=255) gcgcAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGAt > 1:3109801/1‑150 (MQ=255) gcAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCaa < 2:8467104/120‑1 (MQ=255) cGGTGGTCAGCGTTTCGGGTAGATGGAAGTGTGGGCTCTTGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTAt < 2:7838137/150‑1 (MQ=255) gtCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGc < 1:4411565/150‑1 (MQ=255) cAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCg > 2:2815036/1‑150 (MQ=255) aGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCgg < 2:501898/150‑1 (MQ=255) aGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCgg > 1:7195765/1‑150 (MQ=255) cGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGc > 2:4020714/1‑150 (MQ=255) ggggAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGccc > 2:8582141/1‑150 (MQ=255) ggggAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGccc > 2:6967134/1‑150 (MQ=255) gggAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCg > 1:504974/1‑150 (MQ=255) ggAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGa < 1:1414287/150‑1 (MQ=255) ggAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGa > 2:7950671/1‑150 (MQ=255) agaTGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGt < 2:6623945/150‑1 (MQ=255) agaTGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGt < 2:3832948/150‑1 (MQ=255) gaTGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGGGCCGGGCATGCCCGAGTc < 2:2774952/150‑1 (MQ=255) aaGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCa > 2:6744116/1‑150 (MQ=255) tgGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACgtg < 1:752166/150‑1 (MQ=255) gcgcTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTg < 2:1283285/150‑1 (MQ=255) gAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCaaa < 2:8818424/150‑1 (MQ=255) gAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCaaa < 2:3338990/150‑1 (MQ=255) gAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCaaa < 1:4196285/150‑1 (MQ=255) gAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCaaa > 2:5451048/1‑150 (MQ=255) gAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCaaa > 1:6006075/1‑150 (MQ=255) gAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCaaa < 1:8076584/150‑1 (MQ=255) aGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGATGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCAAaga < 1:5582934/150‑1 (MQ=255) aGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCAAaga < 1:2758541/150‑1 (MQ=255) gCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCAAagag > 1:5886681/1‑150 (MQ=255) cATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCAAAgaga > 2:919076/1‑150 (MQ=255) aTACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCAAAGAGAt < 1:6212359/150‑1 (MQ=255) ggCGCGGCATACACCCTGCCAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCAAAGAGATCCGt > 1:545079/1‑150 (MQ=255) gcgcGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCAAAGAGATCCGtt < 1:1517710/150‑1 (MQ=255) gcgcGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCAAAGAGATCCGtt > 2:2056799/1‑150 (MQ=255) | TCAAGCTGAACCACTTGGTGGACGACAAGATGCACGCGCGTTCCACTGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCATACACCCTGCAAGAAATGCTCACAGTGAAGTCGGACGACGTGAACGGCCGTACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGTATGGAGCCGGGCATGCCCGAGTCCTTCAACGTGTTGATCAAAGAGATCCGTT > NC_002947/541368‑541664 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |