| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 542,619 | T→C | 16.3% | S286P (TCG→CCG) ‡ | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 542,619 | 0 | T | C | 16.3% | 789.5 / 124.0 | 324 | S286P (TCG→CCG) ‡ | rpoC | DNA‑directed RNA polymerase subunit beta' |
| Reads supporting (aligned to +/- strand): ref base T (141/130); new base C (25/28); total (166/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.26e-01 | |||||||||||
Only 100 of 326 total aligned reads displayed.
GGATGGTCCTGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAA > NC_002947/542470‑542768 | gATGGTCCTGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTc > 1:7623234/1‑150 (MQ=255) gATGGTCCTGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTc < 1:8761151/150‑1 (MQ=255) gATGGTCCTGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTc > 2:5733535/1‑150 (MQ=255) gATGGTCCTGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTc < 1:2290557/150‑1 (MQ=255) gATGGTCCTGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTc > 2:112644/1‑150 (MQ=255) aTGGTCCTGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCg < 1:1457102/150‑1 (MQ=255) tCCTGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGgcgc > 2:7984258/1‑150 (MQ=255) tCCTGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGgcgc > 2:2421341/1‑150 (MQ=255) cTGACCGTCCTGCCAGTGCTGCCGCCGGACCAGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCg > 2:7114215/1‑150 (MQ=255) tGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCgg > 1:4000356/1‑150 (MQ=255) tGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCgg > 1:4265606/1‑150 (MQ=255) gACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGa < 2:2175864/150‑1 (MQ=255) gACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGa > 2:8615305/1‑150 (MQ=255) cTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACatcatc < 2:587882/150‑1 (MQ=255) gCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGt > 2:3984430/1‑150 (MQ=255) gCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGt > 1:7378628/1‑150 (MQ=255) cAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTgc > 1:8449706/1‑150 (MQ=255) aGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTgcg > 2:5270313/1‑150 (MQ=255) tgcCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACg > 2:3293387/1‑150 (MQ=255) gccgccGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGa < 1:5366280/150‑1 (MQ=255) ccgccgGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGaa > 1:3928816/1‑150 (MQ=255) cgccgGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGaaa < 2:4943794/150‑1 (MQ=255) ccgGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑g < 2:6034622/150‑1 (MQ=255) ggACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑gcg > 2:908860/1‑150 (MQ=255) gACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑gcgc < 1:243552/150‑1 (MQ=255) gACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑gcgc < 1:1768745/150‑1 (MQ=255) aCCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGGTCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCa < 1:3513786/150‑1 (MQ=255) aCCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCa < 2:3837473/150‑1 (MQ=255) tcTGCGTCCTCTGGTTCCGCTCGATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTAt < 2:2963483/149‑1 (MQ=255) tcTGCGTCCTCTGGTTCCGCTCGATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTAt < 1:3030516/149‑1 (MQ=255) ccTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCAt < 1:4355594/150‑1 (MQ=255) gCGTCCTCTGGTTCCGCTCGATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTAtgtt < 1:2359598/150‑3 (MQ=255) gCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGa > 2:3740221/1‑150 (MQ=255) cTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGaa < 1:8548256/150‑1 (MQ=255) cTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGaa < 1:3443260/150‑1 (MQ=255) cTGGTTCCGCTCGATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTATGTTGCAGGaa < 2:3787076/150‑1 (MQ=255) gTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCg < 1:2665935/150‑1 (MQ=255) ttCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCgg < 1:1718171/150‑1 (MQ=255) ttCCGCTCGATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTATGTTGCAGGAAGctg > 1:1354504/1‑148 (MQ=255) tCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGt < 1:5907865/150‑1 (MQ=255) ccGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGtt < 1:9134814/150‑1 (MQ=255) cGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTg < 2:8400947/150‑1 (MQ=255) cGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTg < 1:8247920/150‑1 (MQ=255) cGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTg > 2:6398105/1‑150 (MQ=255) gCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGa > 2:7487038/1‑150 (MQ=255) gCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGa < 2:8845503/150‑1 (MQ=255) cTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGAc < 1:6289801/150‑1 (MQ=255) tcgATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTATGTTGCAGGAAGCTGTTGACg > 1:1869168/3‑150 (MQ=255) tGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACg < 2:4850897/150‑1 (MQ=255) gATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAATCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGct > 1:6137713/1‑150 (MQ=255) ggtcGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTATGTTGCAGGAAGCTGTTGACGCGctgttc < 2:5401065/147‑4 (MQ=255) ggCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTctgctg < 2:1397091/150‑1 (MQ=255) tCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGgc < 2:350403/82‑1 (MQ=255) cgcgACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACgg > 1:5716116/1‑150 (MQ=255) gcgACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGc > 1:212422/1‑150 (MQ=255) gcgACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGc > 1:4882724/1‑150 (MQ=255) aCTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCcgt > 2:4568946/1‑150 (MQ=255) cTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCcgtc < 1:1251281/150‑1 (MQ=255) ttCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCcgtcg > 1:9078618/1‑150 (MQ=255) cGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTg < 1:3692629/150‑1 (MQ=255) ccTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTcg > 2:7043933/1‑150 (MQ=255) ctcaaCGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCcgc < 1:8328041/147‑1 (MQ=255) cTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTcgc > 1:6718151/1‑150 (MQ=255) gAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCgcgc > 2:1297854/1‑150 (MQ=255) aaCGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCCGCGcc > 2:7373986/1‑150 (MQ=255) cGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCAt > 2:5629015/1‑150 (MQ=255) tATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGc < 2:7623234/150‑1 (MQ=255) tCGCCGGGTGATCAACCGTAACAACTGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTc > 2:4375924/1‑150 (MQ=255) tCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTc < 1:6991609/150‑1 (MQ=255) tCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTc < 1:8029536/150‑1 (MQ=255) tCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTc > 2:3628771/1‑150 (MQ=255) cGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCgcgc < 2:179687/134‑1 (MQ=255) gggTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGGCGTGGTCGCGCCATCACTGGCTCGAACa > 2:6558402/1‑150 (MQ=255) aTCAACCGTAACAACCGTCTGAAGCGTCTTATTGACCTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCCGCGTCATCACCGGTGCTAACAAGCGt < 2:8977073/150‑1 (MQ=255) aTCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCCGCGTCATCACCGGTGCTAACaa < 2:8286381/146‑1 (MQ=255) aaCCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCCGCGTCATCACCGGTGCTAACAAGCGTCCg > 1:5180535/1‑150 (MQ=255) ccGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCt < 1:103785/150‑1 (MQ=255) cGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTg > 2:2786884/1‑150 (MQ=255) tAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGaa < 2:4467116/150‑1 (MQ=255) tAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGaa < 2:6842637/150‑1 (MQ=255) aacaacCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAg < 1:4136443/150‑1 (MQ=255) caacCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTc > 2:2395172/1‑150 (MQ=255) aacCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTcc > 2:7275214/1‑150 (MQ=255) ccGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAA‑GCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCCGCGTCATCACCGGTGCTAACAAGCGTCCGCTGAAGTCGCt < 1:8117213/150‑1 (MQ=255) tCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGc > 2:6945163/1‑150 (MQ=255) tGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCg > 1:6463201/1‑150 (MQ=255) aaGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGAc < 1:2876499/150‑1 (MQ=255) aGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACa < 1:4546234/150‑1 (MQ=255) gcCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGa > 2:8171449/1‑150 (MQ=255) ccTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGAt > 2:8494835/1‑150 (MQ=255) ctgctgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATc < 2:7922128/150‑1 (MQ=255) gctgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCaa > 2:2498884/1‑150 (MQ=255) ctgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCaaa < 2:5132519/150‑1 (MQ=255) ctgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCaaa > 2:5062510/1‑150 (MQ=255) tgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAg < 1:5113584/150‑1 (MQ=255) tgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAg < 1:6558402/150‑1 (MQ=255) tgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAg < 2:3928816/150‑1 (MQ=255) tgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGACCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAg < 1:7153805/150‑1 (MQ=255) tCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTaa < 1:6631219/150‑1 (MQ=255) tCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTaa < 1:6835189/150‑1 (MQ=255) | GGATGGTCCTGACCGTCCTGCCAGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAA‑GCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAA > NC_002947/542470‑542768 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |