| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 543,206 | T→C | 7.2% | R481R (CGT→CGC) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 543,206 | 0 | T | C | 7.2% | 1084.8 / 46.3 | 350 | R481R (CGT→CGC) | rpoC | DNA‑directed RNA polymerase subunit beta' |
| Reads supporting (aligned to +/- strand): ref base T (165/158); new base C (14/11); total (181/169) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
Only 100 of 359 total aligned reads displayed.
CTGGGTATCCAGGCGTTTGAACCCGTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCA > NC_002947/543057‑543355 | tCCAGGCGTTTGAACCCGTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCtga > 2:7809504/1‑150 (MQ=255) cAGGCGTTTGAACCCGTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCtgatg > 2:3606216/1‑150 (MQ=255) cAGGCGTTTGAACCCGTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCtgatg > 2:129036/1‑150 (MQ=255) aGGCATTCGAACCCACGCTGATCGAAGGCAAGGCCATTCAGCTGCATCCGCTCGTCTGTACAGCGTTCAACGCTGACTTCGACGGTGACCAGATGGCTGTTCACGTTCCTCTGTCGCTTGAAGCTCAGCTTGAAGCACGCGTGCtgatga < 2:2219182/150‑1 (MQ=255) ggCATTCGAACCCACGCTGATCGAAGGCAAGGCCATTCAGCTGCATCCGCTCGTCTGTACAGCGTTCAACGCTGACTTCGACGGTGACCAGATGGCTGTTCACGTTCCTCTGTCGCTTGAAGCTCAGCTTGAAGCACGCGTGCTgatgat > 2:7958057/1‑150 (MQ=255) gCGTTTGAACCCGTACTGATCGAAGGTAAGGCTATTCAGCTACACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGatgatg < 2:7069856/150‑1 (MQ=255) gTTTGAACCCGTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTc < 2:5230388/150‑1 (MQ=255) gTTTGAACCCGTACTGATCGAAGCTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTc < 1:8001261/150‑1 (MQ=255) tttGAACCCGTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCg < 2:7142128/150‑1 (MQ=255) ttGAACCCGTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGa < 1:5566025/150‑1 (MQ=255) aaCCCGTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACca > 2:8677246/1‑150 (MQ=255) ccGTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACcaaca > 2:7435348/1‑150 (MQ=255) gTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCaacaac > 1:7883617/1‑150 (MQ=255) acgcTGATCGAAGGCAAGGCCATTCAGCTGCATCCGCTCGTCTGTACAGCGTTCAACGCTGACTTCGACGGTGACCAGATGGCTGTTCACGTTCCTCTGTCGCTTGAAGCTCAGCTTGAAGCACGCGTGCTGATGATGTCGACCagcaac > 1:2669110/4‑150 (MQ=255) tACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAacaaca > 1:737628/1‑150 (MQ=255) cTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATc < 1:8373566/150‑1 (MQ=255) tGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATcc > 2:4913991/1‑150 (MQ=255) gATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCt > 2:8339943/1‑150 (MQ=255) gATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCt < 1:1377236/150‑1 (MQ=255) aTCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGt < 2:7267715/120‑1 (MQ=255) aTCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGt > 1:7267715/1‑120 (MQ=255) aTCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTg > 2:137824/1‑150 (MQ=255) aTCGAAGGCAAGGCCATTCAGCTGCATCCGCTCGTCTGTACAGCGTTCAACGCTGACTTCGACGGTGACCAGATGGCTGTTCACGTTCCTCTGTCGCTTGAAGCTCAGCTTGAAGCACGCGTGCTGATGATGTCGACCAACAACATCCTg < 2:8584893/150‑1 (MQ=255) tCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACACCATCCTGt < 1:6701418/150‑1 (MQ=255) tCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGt < 1:5200165/150‑1 (MQ=255) tCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGt > 2:3989502/1‑150 (MQ=255) tCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGt > 1:7820394/1‑150 (MQ=255) tCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGt > 1:38353/1‑150 (MQ=255) cGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTc > 2:5091236/1‑150 (MQ=255) cGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTc < 2:1846850/150‑1 (MQ=255) gAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCg > 1:3019962/1‑150 (MQ=255) gAAGGCAAGGCCATTCAGCTGCATCCGCTCGTCTGTACAGCGTTCAACGCTGACTTCGACGGTGACCAGATGGCTGTTCACGTTCCTCTGTCGCTTGAAGCTCAGCTTGAAGCACGCGTGCTGATGATGTCGACCAACAACATCCTgcac > 2:5218439/1‑147 (MQ=255) aGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCgcc < 1:958583/150‑1 (MQ=255) ggCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCaa > 2:7702342/1‑150 (MQ=255) gCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAAc > 1:8911098/1‑150 (MQ=255) ttCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTg > 2:1685296/1‑150 (MQ=255) ttCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTg < 1:3084185/150‑1 (MQ=255) tCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGa < 1:6517424/150‑1 (MQ=255) aGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGc > 1:5054690/1‑150 (MQ=255) aGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGc > 2:5333468/1‑150 (MQ=255) gCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGcc > 1:3693203/1‑150 (MQ=255) tGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCaa > 2:4342049/1‑150 (MQ=255) tGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCaa > 1:7667834/1‑150 (MQ=255) tGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCaa > 1:1489555/1‑150 (MQ=255) aCCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAatca < 1:8558272/150‑1 (MQ=255) cccGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAatcat > 1:3168316/1‑150 (MQ=255) cGCTCGTCTGTACAGCGTTCAACGCTGACTTCGACGGTGACCAGATGGCTGTTCACGTTCCTCTGTCGCTTGAAGCTCAGCTTGAAGCACGCGTGCTGATGATGTCGACCAACAACATCCTGCACCCGGCAAACGGCGCACCGATCATCg > 1:5927412/1‑150 (MQ=255) gCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGt > 2:6742537/1‑150 (MQ=255) tgcGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGa > 2:9011246/1‑150 (MQ=255) agcGTTCAACGCTGACTTCGACGGTGACCAGATGGCTGTTCACGTTCCTCTGTCGCTTGAAGCTCAGCTTGAAGCACGCGTGCTGATGATGTCGACCAACAACATCCTGCACCCGGCAAACGGCGCACCGATCATCGTTCCTTCGCAGGa > 1:3260501/2‑150 (MQ=255) agcGTTCAACGCTGACTTCGACGGTGACCAGATGGCTGTTCACGTTCCTCTGTCGCTTGAAGCTCAGCTTGAAGCACGCGTGCTGATGATGTCGACCAACAACATCCTGCACCCGGCAAACGGCGCACCGATCATCGTTCCTTCGCAGGa > 1:414408/2‑150 (MQ=255) tACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGtt < 2:104300/150‑1 (MQ=255) aCAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCATCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTg > 1:2800400/1‑150 (MQ=255) cAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGt > 2:8137256/1‑150 (MQ=255) cGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACt < 1:474095/150‑1 (MQ=255) gCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTg < 1:1685296/150‑1 (MQ=255) gCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTg > 1:8494222/1‑150 (MQ=255) ttCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑Tg < 2:660214/150‑1 (MQ=255) ttCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑Tg > 1:6316377/1‑150 (MQ=255) gTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACa < 1:8670654/150‑1 (MQ=255) gTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACa < 1:8720061/150‑1 (MQ=255) aCCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGa > 1:2392991/1‑150 (MQ=255) aGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGAccc < 1:1051332/150‑1 (MQ=255) tGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCggg < 2:5998034/150‑1 (MQ=255) gCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGaa < 1:1207448/150‑1 (MQ=255) cGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTCATGTAGTACA‑GAcccagtacaa < 2:4674870/150‑8 (MQ=255) tCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCAt < 1:8215056/150‑1 (MQ=255) cACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATc < 2:4511399/150‑1 (MQ=255) aCGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCa > 2:3821168/1‑150 (MQ=255) aCGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCa > 2:2340663/1‑150 (MQ=255) cGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCaa < 1:5338609/150‑1 (MQ=255) gTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAAt < 2:8830889/150‑1 (MQ=255) gCTGACCCTGGAAGCCCAGCTCGAAGCGCATGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCaa < 2:7857298/150‑1 (MQ=255) tGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAgg < 2:5874875/150‑1 (MQ=255) gACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAggg < 2:408229/150‑1 (MQ=255) gACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAggg < 1:6540192/150‑1 (MQ=255) gACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAggg > 2:567724/1‑150 (MQ=255) gACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAggg < 2:6103037/150‑1 (MQ=255) aaGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTc < 2:1988114/150‑1 (MQ=255) aaGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTc < 2:38600/150‑1 (MQ=255) gCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTcgc < 2:2438448/150‑1 (MQ=255) gCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTcgc < 2:2840002/150‑1 (MQ=255) cccAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTcgcg < 1:3464222/150‑1 (MQ=255) ccAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTcgcgg > 1:4572515/1‑149 (MQ=255) ccAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCgt < 1:4211123/150‑1 (MQ=255) ccAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCgt > 1:4463757/1‑150 (MQ=255) ccAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCgt < 2:7578187/150‑1 (MQ=255) aGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAATGGCGAAGGTCGCgtgt < 1:3905513/150‑1 (MQ=255) tCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCg > 1:6844111/1‑150 (MQ=255) cGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGc < 2:6353955/150‑1 (MQ=255) gAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGcc > 1:7474587/1‑150 (MQ=255) gAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGcc < 2:3298157/150‑1 (MQ=255) gAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGcc < 2:2141427/150‑1 (MQ=255) aaGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCg > 1:7695432/1‑150 (MQ=255) aaGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCg < 1:7256355/150‑1 (MQ=255) aaGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCg > 1:6919501/1‑150 (MQ=255) gcgcGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGAc > 2:419109/1‑150 (MQ=255) gTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCGATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGc < 1:3606216/150‑1 (MQ=255) gTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCGATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGc < 1:129036/150‑1 (MQ=255) tGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCa > 1:2868811/1‑150 (MQ=255) | CTGGGTATCCAGGCGTTTGAACCCGTACTGATCGAAGGTAAGGCTATTCAGCTGCACCCGCTGGTCTGTGCTGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGACCCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCGACCAACAACATCCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTC‑TGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCA > NC_002947/543057‑543355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |