| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 550,552 | C→G | 8.6% | intergenic (+30/‑112) | tufB → / → rpsJ | elongation factor Tu‑B/30S ribosomal protein S10 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 550,552 | 0 | C | G | 8.6% | 1164.9 / 73.0 | 357 | intergenic (+30/‑112) | tufB/rpsJ | elongation factor Tu‑B/30S ribosomal protein S10 |
| Reads supporting (aligned to +/- strand): ref base C (147/179); new base G (9/22); total (156/201) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.15e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 362 total aligned reads displayed.
AACATTCAGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTT > NC_002947/550403‑550700 | aacaTTCAGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGGCGGCGCCGGCGGTGGGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTc > 2:4101492/1‑150 (MQ=255) aTTCAGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGc < 2:1126933/150‑1 (MQ=255) tCAGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTGAGCgg < 2:1272136/150‑1 (MQ=255) tCAGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTGAGCgg < 1:4925503/150‑1 (MQ=255) tCAGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCgg < 2:8480439/150‑1 (MQ=255) cAGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCCTCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCggg < 1:1379061/150‑1 (MQ=255) cAGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCggg > 1:6169759/1‑150 (MQ=255) cAGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCggg < 1:1032983/150‑1 (MQ=255) aGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCgggg < 2:6969665/150‑1 (MQ=255) aGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCgggg < 2:7074536/150‑1 (MQ=255) aGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCgggg < 2:4393665/150‑1 (MQ=255) aGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTAAAAAAACCCCCGCTGAGCgggg < 1:6538247/150‑1 (MQ=255) gATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCggggg > 1:4466557/1‑150 (MQ=255) aTGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTGAGCGGGGG‑t < 1:2227922/150‑1 (MQ=255) aCTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTGAGCGGGGG‑tttt < 1:2427490/150‑1 (MQ=255) aCTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTGAGCGGGGG‑tttt < 2:8820261/150‑1 (MQ=255) aCTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑tttt < 1:8482441/150‑1 (MQ=255) tGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTGAGCGGGGG‑tttttt < 2:3091040/150‑1 (MQ=255) tGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑tttttt > 2:3532816/1‑150 (MQ=255) tGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑tttttt > 2:1959310/1‑150 (MQ=255) tGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑tttttt > 2:3993487/1‑150 (MQ=255) tGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑tttttt > 1:3355605/1‑150 (MQ=255) ttACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑tttttttt < 1:166551/150‑1 (MQ=255) ttACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑tttttttt < 1:5399408/150‑1 (MQ=255) ttACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑tttttttt < 1:3561859/150‑1 (MQ=255) cccTGATCAAGACCATCGCACTGGAAGACGGTCTGCGCTTCGCGATCCGTGAAGGCGGTCGGACCGTCGGCGCCGGCGTTGTGGCCAAAATCCTCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTAtt < 2:5646523/150‑1 (MQ=255) cccTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTAtt < 1:7081093/150‑1 (MQ=255) ccTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑ATTTTTTTATTg < 2:3298185/150‑1 (MQ=255) cTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTgg < 1:6951288/150‑1 (MQ=255) cTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTgg < 2:5335002/150‑1 (MQ=255) tGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTggg < 1:4094005/150‑1 (MQ=255) gATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGt > 2:2398959/1‑150 (MQ=255) tCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTg > 2:266550/1‑150 (MQ=255) tCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTg > 2:2098371/1‑150 (MQ=255) cAAGACCATCTCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGTAGGCGGTCGTACCGTCGGCACCGGCGTTGTGGCCTATATCATCGAGTTATCACTCGACCGTTTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGa < 1:8372597/150‑1 (MQ=25) cAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑ttttttt > 2:3754762/1‑139 (MQ=255) aGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGaca < 1:301218/150‑1 (MQ=255) aGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGaca < 1:4576447/150‑1 (MQ=255) tCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAAtt < 2:5401389/150‑1 (MQ=255) tCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAAtt < 1:3684490/150‑1 (MQ=255) aaTGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTgggg > 2:8855218/1‑150 (MQ=255) aaTGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTgggg < 1:3470527/150‑1 (MQ=255) aaTGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTgggg > 2:3207652/1‑150 (MQ=255) tGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGc > 1:7304015/1‑150 (MQ=255) ggAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCg > 1:3897068/1‑150 (MQ=255) gAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGt > 2:7318935/1‑150 (MQ=255) aaGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTc > 2:6908477/1‑150 (MQ=255) gACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCta < 1:5212834/150‑1 (MQ=255) cGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCtata < 1:3089402/150‑1 (MQ=255) tCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTATTTGGGGGCGTCTATAGaa > 1:759083/1‑150 (MQ=255) tCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGaa > 1:8057401/1‑150 (MQ=255) tGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATc > 1:5476192/1‑150 (MQ=255) gcgcTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCa < 2:1963314/150‑1 (MQ=255) ttCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGGTTTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTCTAGAATCACGc > 2:7784582/1‑150 (MQ=255) ttCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGcc > 2:4676640/1‑150 (MQ=255) gTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGc < 1:936259/150‑1 (MQ=255) tGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCg < 1:2715661/150‑1 (MQ=255) aGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGc < 1:6326987/150‑1 (MQ=255) aGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGc < 1:8944554/150‑1 (MQ=255) ggTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAg < 2:1464894/150‑1 (MQ=255) gTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGt < 1:3710049/150‑1 (MQ=255) gTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGt > 1:1620955/1‑150 (MQ=255) tCGGCGCCGGCGGTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGGTTTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGt > 2:6431075/1‑150 (MQ=255) ggCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTgg < 2:7475221/150‑1 (MQ=255) cGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACa > 2:2986043/1‑150 (MQ=255) cGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACa < 1:6654398/150‑1 (MQ=255) ggCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAg > 2:8747676/1‑150 (MQ=255) ggCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAg > 2:4602380/1‑150 (MQ=255) gCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGc > 2:7597565/1‑150 (MQ=255) gTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCt < 2:5464602/150‑1 (MQ=255) ttGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTg < 1:8844276/150‑1 (MQ=255) tgGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCgggg < 2:4249764/57‑1 (MQ=255) gCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTc > 1:1946878/1‑150 (MQ=255) gCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTc < 2:3378429/150‑1 (MQ=255) cAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTg > 2:4453251/1‑150 (MQ=255) cAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTGTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTg > 2:507840/1‑150 (MQ=255) tcGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCaa < 1:3206580/150‑1 (MQ=255) tcGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCaa > 2:7640760/1‑150 (MQ=255) tcGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCaa < 2:1342629/150‑1 (MQ=255) tcGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCaa < 1:5690570/150‑1 (MQ=255) cGAGGAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAAt < 1:6741151/150‑1 (MQ=255) aTCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCaaaa < 2:3652219/150‑1 (MQ=255) cACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATc < 2:1694653/150‑1 (MQ=255) ccTCGACCGATGGAAAACACCCCCGCTCAGCGGGGG‑ATATTTGTAGTGGGTTGACACTCAGTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTTTGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCa < 2:7820154/149‑1 (MQ=255) aCTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCa < 2:5788207/150‑1 (MQ=255) cTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAg < 1:7810572/150‑1 (MQ=255) cGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATc < 1:5944274/150‑1 (MQ=255) tGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTa < 2:344941/150‑1 (MQ=255) gAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTAt < 2:2855730/150‑1 (MQ=255) aaaaaCCCCCGCTGAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCa > 1:1760782/1‑150 (MQ=255) aaaaaCCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGAAAAATAAGCAAATCCGTAtaa > 2:7210630/1‑148 (MQ=255) aaaaaCCCCCGCTCAGCGGGGG‑‑TTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAg < 1:1996019/150‑1 (MQ=255) aaaaCCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAg > 1:4746026/1‑150 (MQ=255) aaaaCCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAg < 1:5772672/150‑1 (MQ=255) aaaaCCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAg > 1:2609497/1‑150 (MQ=255) aaaCCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAgg > 1:423753/1‑150 (MQ=255) cccccGCTCAGCGGGGG‑TTTTTTTTATTGGTTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTg < 2:6014818/150‑1 (MQ=255) ccccGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGa > 1:720188/1‑150 (MQ=255) ccGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAg < 1:2098371/150‑1 (MQ=255) gCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCGTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTGTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAgga > 2:6274236/1‑149 (MQ=255) | AACATTCAGATGACTGTTACCCTGATCAAGACCATCGCAATGGAAGACGGTCTGCGCTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCGCCGGCGTTGTGGCCAAAATCATCGAGTAATCACTCGACCGATTGAAAAAACCCCCGCTCAGCGGGGG‑TTTTTTTTATTGGGTTGACACTAATTGGGGGCGTCTATAGAATCACGCCTCCTTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTT > NC_002947/550403‑550700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |