| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 681,295 | G→A | 5.5% | intergenic (+32/+37) | PP_0583 → / ← PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 681,295 | 0 | G | A | 5.5% | 521.3 / 12.1 | 164 | intergenic (+32/+37) | PP_0583/PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
| Reads supporting (aligned to +/- strand): ref base G (82/73); new base A (7/2); total (89/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
Only 100 of 174 total aligned reads displayed.
GGAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCC > NC_002947/681146‑681442 | ggAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCggg < 1:3117498/150‑1 (MQ=255)ggAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCggg < 1:2003734/150‑1 (MQ=255)ggAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCggg < 1:5882058/150‑1 (MQ=255) gAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCgggg < 2:4251753/150‑1 (MQ=255) gAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCgggg < 2:8035109/150‑1 (MQ=255) aGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGt > 2:6828377/1‑150 (MQ=255) ggggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTAtac > 1:5087118/1‑148 (MQ=255) ggggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATcc > 1:2780110/1‑150 (MQ=255) ggggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATcc < 2:6716969/150‑1 (MQ=255) gagaATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGGGCGTTGGGGGGGttttggggg > 1:1528444/1‑143 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCTCCTCGGCCTACATTGCGGCATTCTAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:4039845/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:2379694/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:8113280/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:132387/150‑1 (MQ=255) aTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAg < 2:6963542/150‑1 (MQ=255) aTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAg < 2:6963572/150‑1 (MQ=255) gtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAggg < 1:2991946/150‑1 (MQ=255) gtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAggg < 1:4473342/150‑1 (MQ=255) tgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGc < 2:4709666/150‑1 (MQ=255) tgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGc < 1:1181396/150‑1 (MQ=255) tgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGATAACCCCGCGAAAGGGc < 1:34568/150‑1 (MQ=39) aCCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGGCCGTTCGCGGGGGTATCCGCGAAAGGGCCg > 1:8052564/1‑150 (MQ=255) aCCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCAGCGAAAGGGCCg > 2:5748742/1‑150 (MQ=255) cGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑c > 2:5657096/1‑150 (MQ=255) gAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑ca > 2:5275047/1‑150 (MQ=255) gAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑ca > 2:1966709/1‑150 (MQ=255) ggcggcGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATGGCGGCATTCAAGCAGCTATTGGGCGCGACACGGGGGGAATTGACGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGGGGGGTTATCCGCGAAAGGGCCGG‑caca < 2:8260923/150‑1 (MQ=255) gcggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATACGCGAAAGGGCCGG‑CACAg > 2:3280246/1‑150 (MQ=255) cggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTAGACGGGTTATACGCGAAAGGGCCGG‑CACAgg > 1:4530367/1‑150 (MQ=255) ggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGc > 2:3672166/1‑150 (MQ=255) ggggTATGACTCCACCTCGGCCTACTTTGCGGAATTCAAGCAGCTATTGGGCGCGACCCGGGGGGAATTGAAGCTGTTTTTTTGGGTGTCCTGTGCGGGCCCTTGCGGGGGGTTAGCCGCGAACGGGCCGG‑CACAGGCCATGCAtcatca < 2:3204744/149‑1 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCCTGCATCATCAgg > 2:3059633/1‑150 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATACGCGAAAGGGCCGG‑CACAGGCCCTGCATCATCAgg > 2:1846803/1‑150 (MQ=255) gTATGACTCCACCTCGGCCTACCTTGCGGCAGTCACGCAGCTTTTTGGCGCGCCCCGGGGGGCATTGAAGCTCTGAGTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGt < 2:9071018/150‑1 (MQ=255) gACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCCGGGTTTTACGCGAAAGGGCCCG‑CACAGGCCATGCAACATCAGGTGccg > 1:746437/1‑148 (MQ=255) cTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACACGCCATGCATCATAAGGTGCGGaa > 2:2649170/1‑150 (MQ=255) tCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTGGCGGGGTTGTCCGCGAAAGGGCCGG‑CACAGGCCCAGCAGCATAAGGTGCGGAAc > 2:30404/1‑150 (MQ=255) cccACCTCGGCCTACCTTGCGGCTTTCACGCAGCTTTTTGGCGCGACACGGGGGGAATTGATGCTCTGATTTTGGGTTTCCTGTGCCGGCCCTTTCGGGGGGTTATCCGCGAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAAc < 2:2673441/149‑1 (MQ=255) cACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTGGCGGGGTTTTACGCGAAAAGGCCGG‑CCAACGCCAAGCATAAACACGTGCGGAAccc > 1:2295711/1‑149 (MQ=255) cTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGTACCTgcg > 2:3449434/1‑150 (MQ=255) cTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTAGCGGGGGTTTGCGCGCAAGGGCCGG‑CACAGGCCCAGCAACATCAGGGGCGGAACCAgcg > 1:1730392/1‑150 (MQ=255) cGGCATTCACGCCGCTATTGGGCGCGCCACGGGGGTAATGTACGCTCTTATTTGGGGTTACCTGTGCCGCCCCTGCCGCGGGTTTACCCGCTAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCa < 1:8044615/150‑1 (MQ=255) ggCATTCACGCAGCTATTGGGCGCGACACGGGGGTAATTGAAGCTCTGATTTTGGGTTTCCTGGGCGGGCCCTTTCGCGGGGTTATCCGCGAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAg < 1:4379890/150‑1 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGGCCTTTCGGGGGGTTATGCGCGTTAGGGGCGG‑GACAGGGCATGGATGATCATGTGCGGAACGTGCGGACCAGCGTATGCAg > 2:5460112/1‑150 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAg < 2:7511904/150‑1 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAATGGCCGG‑CACCGGCCAAGCAACATCAGGTGCGGAACCTGCGCCCCAGCGTCTCCAg > 1:5418756/1‑150 (MQ=255) gCATTCAAGCAGCTTTTGGGCGCGACCCGGGGGGAATTGACGCTCTGATTTCGGGTTTCCTGTGCCGGCCCTTGCGGGGGGTTATCCGCGAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGc < 1:1426287/150‑1 (MQ=255) ttCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGGTATACGCGAAATGGCCGG‑CACAGGCCATGCATCAACAGGGGCGGCAACAGCCCACCCGCGTATACAGc‑aca > 1:4723465/1‑150 (MQ=255) ttCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGGGCGGAACCTGCGCACCAGCGTATCCAGC‑TCa > 1:6073019/1‑150 (MQ=255) ttCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACACGCCCGGCATCCACCCGTGCGGCACCGGCCCCCCACCGGATCCCGC‑CCa > 1:7339370/1‑150 (MQ=255) aaGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATACAGC‑TCATTg > 2:5896724/1‑150 (MQ=255) cagcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACACGCCATGCATCATAAGGTGCGGAACCAGCCCACCACCGTAACCAGC‑TCATTGGAc > 1:7453196/1‑150 (MQ=255) agcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATACGCGAAAGGGCCGG‑CACAGGCCATGCATCAACAGGTGCGGAACCTGCGCACCAGCGTATACAGC‑TCAATTGACa > 1:3759822/1‑150 (MQ=255) ctttttGGCGCGACCCGGGGGTATTTGATGGTCTGTTTTTGGGTTTCGTGGGCGGGCCGTTTCGGGGGGTTATCCGCTAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGc < 1:2041260/147‑1 (MQ=255) cTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTAGCCGGGGTATACGCGAAACGGCCGG‑CACAGGGCCAGCCTCAAAAGGGGCGGAACCAGCGCCCCAGCGGATCCACC‑GCATTTGACAGc > 1:1897290/1‑150 (MQ=255) tATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCAGCGCACCAGCGTATCCAGC‑TCATTGGACAGcc > 2:8042643/1‑150 (MQ=255) tATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTGGCGGGGGTGTACGCGAAAGGGCCCG‑CACACGCCCATCATCAAAAGGTGCGGAACCAGCGCACCAGCGGATCCAGCGCCATTGGaagcc > 1:213484/1‑146 (MQ=255) tttGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTAGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCAAGCATCATAAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTTGACAGCCCg > 2:8867632/1‑150 (MQ=255) tGGCGCGCCCCCGGGGGATTTTAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGGGGGTTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGc < 1:6787553/150‑1 (MQ=255) tGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTGCGGGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGc < 2:6381949/150‑1 (MQ=255) ggCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGcc < 2:5226871/150‑1 (MQ=255) ggCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGcc > 2:8150274/1‑150 (MQ=255) ggCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTGGCCGGGGGATGCGCGAAAGGGCCGGCCCCCGGCCAT‑CCTCAACAGGTGCGGAACCGGCGCCCCACCGTATACAGC‑GCATTTGAAACCCCGGcc > 1:5801432/1‑150 (MQ=255) gcgcGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCa < 2:7118713/150‑1 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑GACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAgg > 2:6695392/1‑150 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTAGCGGGGTTATACGCGAAAGGGCCCG‑CACAGGCCATGCATCATAAGGTGCGGAACCTGCGCACCAGCGGATCCAGC‑TCATTGGAAAGCCCCGCCacg > 1:719071/1‑148 (MQ=255) acCGGGGTAATTGAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCtctc < 1:5298233/150‑1 (MQ=255) gggggAATTTAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGa < 2:6339462/150‑1 (MQ=255) gggggAATTGAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTCTCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGa < 2:2941220/150‑1 (MQ=255) gggggAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGa < 1:7567173/150‑1 (MQ=255) gggggAATTGAAGATCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCTAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGa < 1:7567566/150‑1 (MQ=255) gggtAATTGACGCGCTTTTTTTGGGTTGCGTGTGCGGGCCGTTCGGGGGGGTTATCCGCTAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAg < 2:1544362/150‑1 (MQ=255) tatttGAAGCTCTTTTTTTGGTTTGCGTGGGCGGGCCCTTTGGGGGGTTTCCCCGCTAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTcc < 1:8563505/147‑1 (MQ=255) aTTGACGCTCTTTTTTTGGTTTTCCTGTGCGGGCCCTTTCGGGGGGTTATCCGCGAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTg < 1:3613169/150‑1 (MQ=255) aTTGAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTg < 2:7200299/150‑1 (MQ=255) aTTGAAGCTCTGATTTTCGGGTTCCTGTGCCGGCCCTTTCGCGGGGTTACCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTg < 1:6084975/150‑1 (MQ=255) gCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCCCGGGGTTATCCGCGAAAGGGCCCG‑CACAGGCCATGCATCCTCACGTGCGGAACCAGCGCACCAGCGTATCCAGC‑ACAATGGGCCGCCCCGCCACGCTCAAGGAGTCCAGgcgcgc > 1:3727052/1‑150 (MQ=255) tctGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGGTATCCGCGAAAGGGCCGG‑CCCACGCCATGCATCATCAGGTGCGGCACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGcgccg > 2:4880473/1‑150 (MQ=255) aTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCAGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTg > 2:624335/1‑150 (MQ=255) ttttCGGTTTCCTGTGCCGGCCCTTTCGGGGGGTTATCCGCTAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTgg < 1:6615601/150‑1 (MQ=255) ttCGGTTGCCTGTGCCGGCCCTTTCGGGGGGTTAGCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGc < 2:3090359/150‑1 (MQ=255) cGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCCTCATCCGGTGCGGAACCTGCGCACCAGCGGATCCAGC‑TCCTTGGACAGCCCGGCCCGGCTCTCGGCGTCCGGGCGCGCCGCCGGGGCCa > 2:8616092/1‑150 (MQ=255) cTGTGCCGGCCATTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGc < 1:8154371/150‑1 (MQ=255) tgtgCCGGCCCTTTAGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGcc > 2:737894/1‑150 (MQ=255) tgCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCACTCGGAGTCCTTGCGCGCCGCCTGGGCCAGCTCGGccac > 2:5974108/1‑150 (MQ=255) tgCCGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑Tc < 1:2950718/90‑1 (MQ=21) gCCGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGccacc > 2:5269825/1‑150 (MQ=38) ccGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGccacca > 2:481580/1‑150 (MQ=255) ccGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGccacca > 2:110122/1‑150 (MQ=255) cGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGACACCaa > 2:147480/1‑150 (MQ=38) cGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGG‑CACAGGCCAAGCAACAACAGGTGCGGAACCAGCGCACCACCGTATCCAAC‑TCATTGGACACCCCCGCCAGGCACACCGAGTCCAGGCCCGCCCCCAGGGCCAGCACCGCCACCaa > 1:7154620/1‑150 (MQ=16) ccTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgc > 1:6893247/1‑150 (MQ=255) cTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcg > 2:7300221/1‑150 (MQ=255) cTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcg > 2:8515989/1‑150 (MQ=255) cTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcg > 1:3992067/1‑150 (MQ=255) tttCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 2:4744473/1‑150 (MQ=255) tttCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 1:1178938/1‑150 (MQ=255) ttCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGTCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCa > 2:7978892/1‑150 (MQ=255) cgGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATccc > 2:5639694/1‑150 (MQ=255) gggtTTATCCGCTAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATcccc < 1:2600543/150‑1 (MQ=255) | GGAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCC > NC_002947/681146‑681442 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |