| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 681,296 | G→T | 9.1% | intergenic (+33/+36) | PP_0583 → / ← PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 681,296 | 0 | G | T | 9.1% | 485.0 / 18.7 | 164 | intergenic (+33/+36) | PP_0583/PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
| Reads supporting (aligned to +/- strand): ref base G (82/65); new base T (7/10); total (89/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 169 total aligned reads displayed.
GAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCC > NC_002947/681147‑681442 | gAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCgggg < 2:4251753/150‑1 (MQ=255)gAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCgggg < 1:4891346/150‑1 (MQ=255)gAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCgggg < 2:8233734/150‑1 (MQ=255) aGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGt > 2:6828377/1‑150 (MQ=255) ggggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATcc < 2:6716969/150‑1 (MQ=255) ggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCcgc < 1:2060451/150‑1 (MQ=255) gagaATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGGGCGTTGGGGGGGttttggggg > 1:1528444/1‑143 (MQ=255) gagaATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCcgcg > 2:5665783/1‑150 (MQ=255) caTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:4810850/149‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCTCCTCGGCCTACATTGCGGCATTCTAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:4039845/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:8137471/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:2379694/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:132387/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:8113249/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTACGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:4501981/150‑1 (MQ=255) aTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAg < 2:6963572/150‑1 (MQ=255) tgtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGTAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAgg < 1:1966960/150‑1 (MQ=255) gtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAggg < 1:2991946/150‑1 (MQ=255) tgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGc < 1:1181396/150‑1 (MQ=255) tgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGc < 2:4709666/150‑1 (MQ=255) tgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGATAACCCCGCGAAAGGGc < 1:34568/150‑1 (MQ=39) aCCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCAGCGAAAGGGCCg > 2:5748742/1‑150 (MQ=255) gAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGca > 2:5275047/1‑150 (MQ=255) gcggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATACGCGAAAGGGCCGGCACAg > 2:3280246/1‑150 (MQ=255) cggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTAGACGGGTTATACGCGAAAGGGCCGGCACAgg > 1:4530367/1‑150 (MQ=255) ggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGc > 2:3672166/1‑150 (MQ=255) ggggTATGACTCCACCTCGGCCTACTTTGCGGAATTCAAGCAGCTATTGGGCGCGACCCGGGGGGAATTGAAGCTGTTTTTTTGGGTGTCCTGTGCGGGCCCTTGCGGGGGGTTAGCCGCGAACGGGCCGGCACAGGCCATGCAtcatca < 2:3204744/149‑1 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAACGGGCCGGCACAGGCCATGCATCATCAgg > 2:6021156/1‑150 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCCTGCATCATCAgg > 2:3059633/1‑150 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAgg > 2:7524473/1‑150 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATACGCGAAAGGGCCGGCACAGGCCCTGCATCATCAgg > 2:1846803/1‑150 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTCGCGGGGGTATCCGCGCAAGGGCCGGCACAGGCCCTGCAacatcacg > 1:438745/1‑148 (MQ=255) aTGACTCCCCCTCGCCCTACTTGGCGCCACGCAAGCCGCTTTTTGGCGCGACCCCGGGGGAATTGAAGCTGTGATTTTGGGTTTCCGGGGCGGGCCCTTTCGCGGGTTTAGCCGCTAAAGGGCCGGCACAGGCCATGCATCATCAGGTGc < 2:3149603/150‑1 (MQ=255) gACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCCGGGTTTTACGCGAAAGGGCCCGCACAGGCCATGCAACATCAGGTGccg > 1:746437/1‑148 (MQ=255) gACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTCGCGGGGGGTTACGCCGAAGGGGCGGCCCCGGCCAGGCCTCAGAAAGTGCgg > 1:4068597/1‑150 (MQ=255) cTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGGCACACGCCATGCATCATAAGGTGCGGaa > 2:2649170/1‑150 (MQ=255) tCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTGGCGGGGTTGTCCGCGAAAGGGCCGGCACAGGCCCAGCAGCATAAGGTGCGGAAc > 2:30404/1‑150 (MQ=255) cACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTGGCGGGGTTTTACGCGAAAAGGCCGGCCAACGCCAAGCATAAACACGTGCGGAAccc > 1:2295711/1‑149 (MQ=255) cACCGCGGCCTACATTGCGGAATTCACGCAGCTTTTGGGCGCGACACCGGGGTAATTGAAGCTCTTTTTTTGGGTTCCGTGGGCCGGCCCTTCCGGGGGTTTATCCGCGAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCt < 1:583340/150‑1 (MQ=255) aCCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTg > 2:2102558/1‑150 (MQ=255) cTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGTACCTgcg > 2:3449434/1‑150 (MQ=255) cTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTAGCGGGGGTTTGCGCGCAAGGGCCGGCACAGGCCCAGCAACATCAGGGGCGGAACCAgcg > 1:1730392/1‑150 (MQ=255) cTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCCTGCCCGGGGGGATCCCCGCAAGGGCCGGCACACGCCCGGCCTCAACAGGGGCGGACCCAgcc > 1:6877629/1‑149 (MQ=255) cGGCCTACTTGGCGGCATTCAAGCAGCTATTTGGCGCGACCCCGGGGTATTTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTAATCGGCGAATGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCa < 1:3730041/150‑1 (MQ=255) ccTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCa > 1:8382327/1‑150 (MQ=255) ccTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCAGCGCACCa > 1:7391060/1‑150 (MQ=255) aaCATGGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTGTGATTTGCGGTTTCGTGTGCCGGCCCTTTCGCGGGGTTAGCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGc < 1:7593242/149‑1 (MQ=255) cGGCATTCACGCCGCTATTGGGCGCGCCACGGGGGTAATGTACGCTCTTATTTGGGGTTACCTGTGCCGCCCCTGCCGCGGGTTTACCCGCTAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCa < 1:8044615/150‑1 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGGCCTTTCGGGGGGTTATGCGCGTTAGGGGCGGGACAGGGCATGGATGATCATGTGCGGAACGTGCGGACCAGCGTATGCAg > 2:5460112/1‑150 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAg < 2:7511904/150‑1 (MQ=255) gCATTCAAGCAGCTTTTGGGCGCGACCCGGGGGGAATTGACGCTCTGATTTCGGGTTTCCTGTGCCGGCCCTTGCGGGGGGTTATCCGCGAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGc < 1:1426287/150‑1 (MQ=255) ttCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGGGCGGAACCTGCGCACCAGCGTATCCAGCTCa > 1:6073019/1‑150 (MQ=255) cacgcagcTATTTGGCGCGACCCCGGGGGATTTGACGCTCTGTTTTTCGGTGTCCTGGGCCGGCCCGTGCGCGGGGTTATCCGCGAATGGGCCGGCACAGGCCATGCATCATCCGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCAtt < 2:8696242/147‑1 (MQ=255) aaGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATACAGCTCATTg > 2:5896724/1‑150 (MQ=255) gcagcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCCGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCGCATTGGa > 2:6928265/1‑150 (MQ=255) cTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTAGCCGGGGTATACGCGAAACGGCCGGCACAGGGCCAGCCTCAAAAGGGGCGGAACCAGCGCCCCAGCGGATCCACCGCATTTGACAGc > 1:1897290/1‑150 (MQ=255) tATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCAGCGCACCAGCGTATCCAGCTCATTGGACAGcc > 2:8042643/1‑150 (MQ=255) tGGCGCGCCCCCGGGGGATTTTAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGGGGGTTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGc < 1:6787553/150‑1 (MQ=255) tGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTGCGGGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGc < 2:6381949/150‑1 (MQ=255) ggCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGcc < 2:5226871/150‑1 (MQ=255) gcgcGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCa < 2:7118713/150‑1 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGGACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAgg > 2:6695392/1‑150 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCCAGCAACAAAAGGTGCGGAACCAGCGCACCAGCGTATCCAGCGCAATGGACAGCCCCGCCCgg > 2:1264829/1‑150 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTAGCGGGGTTATACGCGAAAGGGCCCGCACAGGCCATGCATCATAAGGTGCGGAACCTGCGCACCAGCGGATCCAGCTCATTGGAAAGCCCCGCCacg > 1:719071/1‑148 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCAAGCAACAAAAGGTGCGGAACCAGCGCACCACCGTATCCAGCACATTGGACAGCCCCGCCAgg > 1:719128/1‑150 (MQ=255) acCGGGGTAATTGAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCtctc < 1:5298233/150‑1 (MQ=255) gggggAATTTAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGa < 2:6339462/150‑1 (MQ=255) gggggAATTGAAGCTCTTATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGa < 1:7567474/150‑1 (MQ=255) gggggAATTGAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTCTCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGa < 2:2941220/150‑1 (MQ=255) gggtAATTGACGCGCTTTTTTTGGGTTGCGTGTGCGGGCCGTTCGGGGGGGTTATCCGCTAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAg < 2:1544362/150‑1 (MQ=255) ggggAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAg < 2:2764036/150‑1 (MQ=255) tatttGAAGCTCTTTTTTTGGTTTGCGTGGGCGGGCCCTTTGGGGGGTTTCCCCGCTAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTcc < 1:8563505/147‑1 (MQ=255) aTTGACGCTCTTTTTTTGGTTTTCCTGTGCGGGCCCTTTCGGGGGGTTATCCGCGAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTg < 1:3613169/150‑1 (MQ=255) aTTGAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTg < 2:7200299/150‑1 (MQ=255) aTTGAAGCTCTGATTTTCGGGTTCCTGTGCCGGCCCTTTCGCGGGGTTACCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTg < 1:6084975/150‑1 (MQ=255) aaGCTCTGATTTTCGTTTTCCTGTGCGGGCCCTTTCGCGGGTTTATCCGCGAATGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGgcgc < 1:5244039/150‑1 (MQ=255) tctGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCCCAGGCCAAGCATCATCAGGTGCGGAACCGGCGCACCAGCGTATCCAGCTAAATGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGcgccg > 2:8065338/1‑150 (MQ=255) tctGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGGTATCCGCGAAAGGGCCGGCCCACGCCATGCATCATCAGGTGCGGCACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGcgccg > 2:4880473/1‑150 (MQ=255) tctGATTTTCGGTTTCCTGTGCCGGCCCGTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGcgccg > 2:8440197/1‑150 (MQ=255) ttttggggTTGCGTGGGCCGCCCCTTGCGGGGGTATACCCGCCAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTg < 1:2245147/144‑1 (MQ=255) aTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCAGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTg > 2:624335/1‑150 (MQ=255) ttttGGGTTTGGGGTGCCGGCAGTTTCGGGGGGTTCACCGGTAATGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCAACAGCGTATCCAGCTCATTTGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTgg < 1:5511984/150‑1 (MQ=255) ttttCGGTTTCCTGTGCCGGCCCTTTCGGGGGGTTATCCGCTAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTgg < 1:6615601/150‑1 (MQ=255) ttttCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTgg < 1:7524473/150‑1 (MQ=255) gTTTCCTGTGCCGGCACTTTCGCGGGTTAATCCGCTAAAGGCCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGc < 2:1528444/150‑1 (MQ=255) gTTTCATGTGCCGGCCCATTCGCCGGGGTATCCGCGAAAGGGCCGGCACAGGCCAAGCAACATAAGGTGCGGAACCTGCGCACCAGCGTATCCAGCACATTGGACAGCCCGGCCATGCTCAAGGAGTCCTGGCGCGCCCCCTGGGCCAGc > 2:4837183/1‑150 (MQ=255) tgtgCCGGCCCTTTAGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGcc > 2:737894/1‑150 (MQ=255) tgCCGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTc < 1:2950718/90‑1 (MQ=21) gCCGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGccacc > 2:5270100/1‑150 (MQ=38) cGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGGCACAGGCCAAGCAACAACAGGTGCGGAACCAGCGCACCACCGTATCCAACTCATTGGACACCCCCGCCAGGCACACCGAGTCCAGGCCCGCCCCCAGGGCCAGCACCGCCACCaa > 1:7154620/1‑150 (MQ=16) ggCCCTTTCGCGGATAACCCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAAc > 2:9015770/1‑150 (MQ=39) gCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACt > 1:3670211/1‑150 (MQ=255) gCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCAATGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACt > 1:2946638/1‑150 (MQ=255) cTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcg < 2:8032923/150‑1 (MQ=255) cTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcg > 2:8515989/1‑150 (MQ=255) cTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcg > 1:3992067/1‑150 (MQ=255) tttCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 2:7220796/1‑150 (MQ=255) tttCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 1:1178938/1‑150 (MQ=255) cgGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATccc > 2:5639694/1‑150 (MQ=255) gggtTTATCCGCTAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATcccc < 1:2600543/150‑1 (MQ=255) | GAGGCGGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCC > NC_002947/681147‑681442 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |