| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 681,299 | A→C | 5.9% | intergenic (+36/+33) | PP_0583 → / ← PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 681,299 | 0 | A | C | 5.9% | 454.4 / 4.2 | 166 | intergenic (+36/+33) | PP_0583/PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
| Reads supporting (aligned to +/- strand): ref base A (73/73); new base C (8/5); total (88/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 166 total aligned reads displayed.
GGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTGAA > NC_002947/681152‑681447 | gggggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATc < 1:1759407/150‑1 (MQ=255) ggggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATcc > 1:2780110/1‑150 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCTCCTCGGCCTACATTGCGGCATTCTAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:4039845/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:4236897/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:8113249/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:8137471/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:2379694/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:132387/150‑1 (MQ=255) aTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAg < 2:6963572/150‑1 (MQ=255) aTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAg < 2:6963542/150‑1 (MQ=255) tgtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAgg < 1:3039430/150‑1 (MQ=255) gtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAggg < 1:2991946/150‑1 (MQ=255) gtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAggg < 1:1697935/150‑1 (MQ=255) gtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAggg < 1:4473342/150‑1 (MQ=255) tgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGc < 1:1181396/150‑1 (MQ=255) aCCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCAGCGAAAGGGCCg > 2:5748742/1‑150 (MQ=255) cGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGc > 2:5657096/1‑150 (MQ=255) gAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGca > 2:5275047/1‑150 (MQ=255) gAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGca > 2:1966709/1‑150 (MQ=255) gcggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATACGCGAAAGGGCCGGCACAg > 2:3280246/1‑150 (MQ=255) cggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTAGACGGGTTATACGCGAAAGGGCCGGCACAgg > 1:4530367/1‑150 (MQ=255) ggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGc > 2:3672166/1‑150 (MQ=255) tGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGc < 2:6708384/150‑1 (MQ=255) ggggTATGACTCCACCTCGGCCTACTTTGCGGAATTCAAGCAGCTATTGGGCGCGACCCGGGGGGAATTGAAGCTGTTTTTTTGGGTGTCCTGTGCGGGCCCTTGCGGGGGGTTAGCCGCGAACGGGCCGGCACAGGCCATGCAtcatca < 2:3204744/149‑1 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCCTGCATCATCAgg > 2:3059633/1‑150 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAgg > 2:7524473/1‑150 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATACGCGAAAGGGCCGGCACAGGCCCTGCATCATCAgg > 2:1846803/1‑150 (MQ=255) gACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCCGGGTTTTACGCGAAAGGGCCCGCACAGGCCATGCAACATCAGGTGccg > 1:746437/1‑148 (MQ=255) gACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTCGCGGGGGGTTACGCCGAAGGGGCGGCCCCGGCCAGGCCTCAGAAAGTGCgg > 1:4068597/1‑150 (MQ=255) tCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTGGCGGGGTTGTCCGCGAAAGGGCCGGCACAGGCCCAGCAGCATAAGGTGCGGAAc > 2:30404/1‑150 (MQ=255) cccACCTCGGCCTACCTTGCGGCTTTCACGCAGCTTTTTGGCGCGACACGGGGGGAATTGATGCTCTGATTTTGGGTTTCCTGTGCCGGCCCTTTCGGGGGGTTATCCGCGAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAAc < 2:2673441/149‑1 (MQ=255) cACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTAGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGTACCt > 2:2596906/1‑150 (MQ=255) cACCGCGGCCTACATTGCGGAATTCACGCAGCTTTTGGGCGCGACACCGGGGTAATTGAAGCTCTTTTTTTGGGTTCCGTGGGCCGGCCCTTCCGGGGGTTTATCCGCGAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCt < 1:583340/150‑1 (MQ=255) cTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCCTGCCCGGGGGGATCCCCGCAAGGGCCGGCACACGCCCGGCCTCAACAGGGGCGGACCCAgcc > 1:6877629/1‑149 (MQ=255) ccTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCAGCGCACCa > 1:7391060/1‑150 (MQ=255) aaCATGGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTGTGATTTGCGGTTTCGTGTGCCGGCCCTTTCGCGGGGTTAGCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGc < 1:7593242/149‑1 (MQ=255) cGGCATTCACGCCGCTATTGGGCGCGCCACGGGGGTAATGTACGCTCTTATTTGGGGTTACCTGTGCCGCCCCTGCCGCGGGTTTACCCGCTAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCa < 1:8044615/150‑1 (MQ=255) ggCATTCACGCAGCTATTGGGCGCGACACGGGGGTAATTGAAGCTCTGATTTTGGGTTTCCTGGGCGGGCCCTTTCGCGGGGTTATCCGCGAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAg < 1:4379890/150‑1 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGACGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAg < 2:5550371/150‑1 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGGCCTTTCGGGGGGTTATGCGCGTTAGGGGCGGGACAGGGCATGGATGATCATGTGCGGAACGTGCGGACCAGCGTATGCAg > 2:5460112/1‑150 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAg < 2:7511904/150‑1 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAATGGCCGGCACCGGCCAAGCAACATCAGGTGCGGAACCTGCGCCCCAGCGTCTCCAg > 1:5418756/1‑150 (MQ=255) aTTCAAGCAGCTTTTGGGCGCGACACGGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTAGCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑Tc < 2:343962/150‑1 (MQ=255) ttCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGGTATACGCGAAATGGCCGGCACAGGCCATGCATCAACAGGGGCGGCAACAGCCCACCCGCGTATACAGc‑aca > 1:4723465/1‑150 (MQ=255) ttCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGGGCGGAACCTGCGCACCAGCGTATCCAGC‑TCa > 1:6073019/1‑150 (MQ=255) tCACGCAGCTTTTTGGCGCGACACCGGGGTAATTTAAGATTTTATTTTCGGTTTCCTGTGCCGGCCCTTGCGGGGGGTTATCCGCTAATGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCAt < 1:1361151/150‑1 (MQ=255) cacgcagcTATTTGGCGCGACCCCGGGGGATTTGACGCTCTGTTTTTCGGTGTCCTGGGCCGGCCCGTGCGCGGGGTTATCCGCGAATGGGCCGGCACAGGCCATGCATCATCCGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCAtt < 2:8696242/147‑1 (MQ=255) aaGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTCTCCGCGAAAGGGCCGGCACAGGCCCTGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTg > 2:5896719/1‑150 (MQ=255) agcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATACGCGAAAGGGCCGGCACAGGCCATGCATCAACAGGTGCGGAACCTGCGCACCAGCGTATACAGC‑TCAATTGACa > 1:3759822/1‑150 (MQ=255) ctttttGGCGCGACCCGGGGGTATTTGATGGTCTGTTTTTGGGTTTCGTGGGCGGGCCGTTTCGGGGGGTTATCCGCTAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGc < 1:2041260/147‑1 (MQ=255) cTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTAGCCGGGGTATACGCGAAACGGCCGGCACAGGGCCAGCCTCAAAAGGGGCGGAACCAGCGCCCCAGCGGATCCACC‑GCATTTGACAGc > 1:1897290/1‑150 (MQ=255) tATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTGGCGGGGGTGTACGCGAAAGGGCCCGCACACGCCCATCATCAAAAGGTGCGGAACCAGCGCACCAGCGGATCCAGCGCCATTGGaagcc > 1:213484/1‑146 (MQ=255) tGGCGCGCCCCCGGGGGATTTTAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGGGGGTTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGc < 1:6787553/150‑1 (MQ=255) ggCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGcc > 2:8150274/1‑150 (MQ=255) ggCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGcc < 2:5226871/150‑1 (MQ=255) gcgcGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCa < 2:7118713/150‑1 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGGACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAgg > 2:6695392/1‑150 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCCAGCAACAAAAGGTGCGGAACCAGCGCACCAGCGTATCCAGC‑GCAATGGACAGCCCCGCCCgg > 2:1264829/1‑150 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTAGCGGGGTTATACGCGAAAGGGCCCGCACAGGCCATGCATCATAAGGTGCGGAACCTGCGCACCAGCGGATCCAGC‑TCATTGGAAAGCCCCGCCacg > 1:719071/1‑148 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCAAGCAACAAAAGGTGCGGAACCAGCGCACCACCGTATCCAGC‑ACATTGGACAGCCCCGCCAgg > 1:719128/1‑150 (MQ=255) gggggAATTGAAGCTCTTATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGa < 1:7567474/150‑1 (MQ=255) gggggAATTGAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTCTCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGa < 2:2941220/150‑1 (MQ=255) gggggAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGa < 2:6339587/150‑1 (MQ=255) gggtAATTGACGCGCTTTTTTTGGGTTGCGTGTGCGGGCCGTTCGGGGGGGTTATCCGCTAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAg < 2:1544362/150‑1 (MQ=255) tatttGAAGCTCTTTTTTTGGTTTGCGTGGGCGGGCCCTTTGGGGGGTTTCCCCGCTAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTcc < 1:8563505/147‑1 (MQ=255) aTTGAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTg < 2:7200299/150‑1 (MQ=255) aTTGAAGCTCTGATTTTCGGGTTCCTGTGCCGGCCCTTTCGCGGGGTTACCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTg < 1:6084975/150‑1 (MQ=255) aaGCTCTGATTTTCGTTTTCCTGTGCGGGCCCTTTCGCGGGTTTATCCGCGAATGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGgcgc < 1:5244039/150‑1 (MQ=255) gCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCCCGGGGTTATCCGCGAAAGGGCCCGCACAGGCCATGCATCCTCACGTGCGGAACCAGCGCACCAGCGTATCCAGC‑ACAATGGGCCGCCCCGCCACGCTCAAGGAGTCCAGgcgcgc > 1:3727052/1‑150 (MQ=255) tctGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCCCAGGCCAAGCATCATCAGGTGCGGAACCGGCGCACCAGCGTATCCAGC‑TAAATGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGcgccg > 2:8065338/1‑150 (MQ=255) tctGATTTTCGGTTTCCTGTGCCGGCCCGTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGcgccg > 2:8440197/1‑150 (MQ=255) ttttggggTTGCGTGGGCCGCCCCTTGCGGGGGTATACCCGCCAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTg < 1:2245147/144‑1 (MQ=255) aTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCAGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTg > 2:624335/1‑150 (MQ=255) ttttGGGTTTGGGGTGCCGGCAGTTTCGGGGGGTTCACCGGTAATGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCAACAGCGTATCCAGC‑TCATTTGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTgg < 1:5511984/150‑1 (MQ=255) ttttCGGTTTCCTGTGCCGGCCCTTTCGGGGGGTTATCCGCTAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTgg < 1:6615601/150‑1 (MQ=255) ttttCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTgg < 1:7524473/150‑1 (MQ=255) ttCGGTTGCCTGTGCCGGCCCTTTCGGGGGGTTAGCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGc < 2:3090359/150‑1 (MQ=255) cGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCCTCATCCGGTGCGGAACCTGCGCACCAGCGGATCCAGC‑TCCTTGGACAGCCCGGCCCGGCTCTCGGCGTCCGGGCGCGCCGCCGGGGCCa > 2:8616092/1‑150 (MQ=255) gTTTCATGTGCCGGCCCATTCGCCGGGGTATCCGCGAAAGGGCCGGCACAGGCCAAGCAACATAAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑ACATTGGACAGCCCGGCCATGCTCAAGGAGTCCTGGCGCGCCCCCTGGGCCAGc > 2:4837183/1‑150 (MQ=255) cTGTGCCGGCCCTTTCGCGGATAACCCCCCGAAAGGGCCGGCACACGCCATGCATAATCAGGTGCGGAAACTTCGCACCACCGTAACCAGC‑TCAAAGGACACCCCGGCCAGGCTCGAGGAGTACAGGCGCGCCCCCCGGGCCAGCTCGGc > 2:680149/1‑150 (MQ=16) cTGTGCCGGCCATTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGc < 1:8154371/150‑1 (MQ=255) tgtgCCGGCCCTTTAGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGcc > 2:737894/1‑150 (MQ=255) tgCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCACTCGGAGTCCTTGCGCGCCGCCTGGGCCAGCTCGGccac > 2:5974108/1‑150 (MQ=255) tgCCGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑Tc < 1:2950718/90‑1 (MQ=21) gCCGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGccacc > 2:5269825/1‑150 (MQ=38) ccGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGccacca > 2:481580/1‑150 (MQ=255) cGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGACACCaa > 2:147480/1‑150 (MQ=38) cGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGGCACAGGCCAAGCAACAACAGGTGCGGAACCAGCGCACCACCGTATCCAAC‑TCATTGGACACCCCCGCCAGGCACACCGAGTCCAGGCCCGCCCCCAGGGCCAGCACCGCCACCaa > 1:7154620/1‑150 (MQ=16) ggCCCTTTCGCGGATAACCCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAAc > 2:9015770/1‑150 (MQ=39) gCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACt > 1:3670211/1‑150 (MQ=255) ccTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgc > 2:6311576/1‑150 (MQ=255) ccTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgc > 1:3488844/1‑150 (MQ=255) acTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACAAACTgc > 1:2381637/2‑150 (MQ=255) cTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcg < 2:8032923/150‑1 (MQ=255) tttCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 2:7220796/1‑150 (MQ=255) tttCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 2:4744473/1‑150 (MQ=255) tttCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 1:1178938/1‑150 (MQ=255) gggtTTATCCGCTAACGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATcccc < 1:2600543/150‑1 (MQ=255) ttATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTGa < 2:5087118/150‑1 (MQ=255) ttATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTGa < 2:2780110/150‑1 (MQ=255) | GGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGC‑TCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTGAA > NC_002947/681152‑681447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |