| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 681,300 | T→C | 8.1% | intergenic (+37/+32) | PP_0583 → / ← PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 681,300 | 0 | T | C | 8.1% | 454.7 / 16.6 | 165 | intergenic (+37/+32) | PP_0583/PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
| Reads supporting (aligned to +/- strand): ref base T (80/65); new base C (7/6); total (87/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.40e-01 | |||||||||||
Only 100 of 167 total aligned reads displayed.
GGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTGAATC > NC_002947/681152‑681449 | gggggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATc < 1:1759407/150‑1 (MQ=255) ggggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTAtac > 1:5087118/1‑148 (MQ=255) ggggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATcc < 1:2959504/150‑1 (MQ=255) ggggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATcc > 1:2780110/1‑150 (MQ=255) ggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCcgc < 1:2060451/150‑1 (MQ=255) gagaATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCcgcg > 2:5665783/1‑150 (MQ=255) caTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:4810850/149‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:51675/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:4236897/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:8113280/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 2:7156476/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:132387/150‑1 (MQ=255) aaTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTACGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGaaa < 1:4501981/150‑1 (MQ=255) aTGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAg < 2:6963572/150‑1 (MQ=255) tgtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGTAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAgg < 1:1966960/150‑1 (MQ=255) tgtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAgg < 1:3039430/150‑1 (MQ=255) gtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAggg < 1:1697935/150‑1 (MQ=255) tgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGc < 1:1181396/150‑1 (MQ=255) tgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGATAACCCCGCGAAAGGGc < 1:34568/150‑1 (MQ=39) aCCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGGCCGTTCGCGGGGGTATCCGCGAAAGGGCCg > 1:8052564/1‑150 (MQ=255) cGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑c > 2:5657096/1‑150 (MQ=255) gAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑ca > 2:5275047/1‑150 (MQ=255) gAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑ca > 2:1966709/1‑150 (MQ=255) gAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTAGCGGGGTTATCCGCGGAAGGGCCGG‑ca > 2:3231664/1‑150 (MQ=255) ggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGc > 2:3672166/1‑150 (MQ=255) ggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTAGCGGGGTTATACGCGAAAGGGCCGG‑CACAGGc > 1:7162515/1‑150 (MQ=255) tGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGc < 2:6708384/150‑1 (MQ=255) tgGGTATGACTCCACCTCGGCCTACATTGCGGCATTCACGAAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGGGGGGTTATCCGCGAATGGGCCGG‑CACAGGCCATGCAtcatca < 2:1691016/150‑1 (MQ=255) ggggTATGACTCCACCTCGGCCTACTTTGCGGAATTCAAGCAGCTATTGGGCGCGACCCGGGGGGAATTGAAGCTGTTTTTTTGGGTGTCCTGTGCGGGCCCTTGCGGGGGGTTAGCCGCGAACGGGCCGG‑CACAGGCCATGCAtcatca < 2:3204744/149‑1 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAACGGGCCGG‑CACAGGCCATGCATCATCAgg > 2:6021156/1‑150 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAgg > 2:7524473/1‑150 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCCCGGGGTTATCCGCGGAAGGGCCGG‑CACAGGCCATGCATCATCAgg > 2:3059614/1‑150 (MQ=255) ggTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTCGCGGGGGTATCCGCGCAAGGGCCGG‑CACAGGCCCTGCAacatcacg > 1:438745/1‑148 (MQ=255) gACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTAGCGGGGTTATGCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCATGTGCgg > 1:6758468/1‑150 (MQ=255) tCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTGGCGGGGTTGTCCGCGAAAGGGCCGG‑CACAGGCCCAGCAGCATAAGGTGCGGAAc > 2:30404/1‑150 (MQ=255) tCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CCCAGGCCATGCATCATCAGGTGCGGAAc > 2:3986614/1‑150 (MQ=255) cccACCTCGGCCTACCTTGCGGCTTTCACGCAGCTTTTTGGCGCGACACGGGGGGAATTGATGCTCTGATTTTGGGTTTCCTGTGCCGGCCCTTTCGGGGGGTTATCCGCGAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAAc < 2:2673441/149‑1 (MQ=255) cACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTAGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGTACCt > 2:2596906/1‑150 (MQ=255) cACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTGGCGGGGTTTTACGCGAAAAGGCCGG‑CCAACGCCAAGCATAAACACGTGCGGAAccc > 1:2295711/1‑149 (MQ=255) aCCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTg > 2:2102558/1‑150 (MQ=255) cTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCCTGCCCGGGGGGATCCCCGCAAGGGCCGG‑CACACGCCCGGCCTCAACAGGGGCGGACCCAgcc > 1:6877629/1‑149 (MQ=255) cGGCCTACTTGGCGGCATTCAAGCAGCTATTTGGCGCGACCCCGGGGTATTTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTAATCGGCGAATGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCa < 1:3730041/150‑1 (MQ=255) ccTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCa > 1:8382327/1‑150 (MQ=255) aTTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTGGCGGGGTTTTCCGCGAAAGGGCCCG‑CACCGGCCCTGCATCAACACGTGCGGAAACTGCGCACCACCGTa > 1:6534704/1‑150 (MQ=255) cGGCATTCACGCCGCTATTGGGCGCGCCACGGGGGTAATGTACGCTCTTATTTGGGGTTACCTGTGCCGCCCCTGCCGCGGGTTTACCCGCTAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCa < 1:8044615/150‑1 (MQ=255) ggCATTCACGCAGCTATTGGGCGCGACACGGGGGTAATTGAAGCTCTGATTTTGGGTTTCCTGGGCGGGCCCTTTCGCGGGGTTATCCGCGAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAg < 1:4379890/150‑1 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGACGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAg < 2:5550371/150‑1 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGTACCGGCGCACCAGCGTATCCAg > 1:6070784/1‑150 (MQ=255) gCATTCAAGCAGCTTTTGGGCGCGACCCGGGGGGAATTGACGCTCTGATTTCGGGTTTCCTGTGCCGGCCCTTGCGGGGGGTTATCCGCGAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGc < 1:1426287/150‑1 (MQ=255) aTTCAAGCAGCTTTTGGGCGCGACACGGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTAGCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTc < 2:343962/150‑1 (MQ=255) ttCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGGTATACGCGAAATGGCCGG‑CACAGGCCATGCATCAACAGGGGCGGCAACAGCCCACCCGCGTATACAGcaca > 1:4723465/1‑150 (MQ=255) ttCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACACGCCCGGCATCCACCCGTGCGGCACCGGCCCCCCACCGGATCCCGCCCa > 1:7339370/1‑150 (MQ=255) cacgcagcTATTTGGCGCGACCCCGGGGGATTTGACGCTCTGTTTTTCGGTGTCCTGGGCCGGCCCGTGCGCGGGGTTATCCGCGAATGGGCCGG‑CACAGGCCATGCATCATCCGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCAtt < 2:8696242/147‑1 (MQ=255) aaGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTCTCCGCGAAAGGGCCGG‑CACAGGCCCTGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTg > 2:5896719/1‑150 (MQ=255) aaGCAGCTATTGGGCGCGACCCCGGGGGAATTGACGCGCTGATTTTCGGTTTCCTGTGCCGGCCCTTTGGCGGGGTTATCCGCTAATGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTg < 2:5375587/150‑1 (MQ=255) gcagcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGa < 2:7469496/150‑1 (MQ=255) gcagcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCCG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCGCATTGGa > 2:6928265/1‑150 (MQ=255) cagcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACACGCCATGCATCATAAGGTGCGGAACCAGCCCACCACCGTAACCAGCTCATTGGAc > 1:7453196/1‑150 (MQ=255) cTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTAGCCGGGGTATACGCGAAACGGCCGG‑CACAGGGCCAGCCTCAAAAGGGGCGGAACCAGCGCCCCAGCGGATCCACCGCATTTGACAGc > 1:1897290/1‑150 (MQ=255) tATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCAGCGCACCAGCGTATCCAGCTCATTGGACAGcc > 2:8042643/1‑150 (MQ=255) tGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTGCGGGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGc < 2:6381949/150‑1 (MQ=255) ggCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGcc > 2:8150274/1‑150 (MQ=255) ggCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCGTTGGCCGGGGGATGCGCGAAAGGGCCGGCCCCCGGCCAT‑CCTCAACAGGTGCGGAACCGGCGCCCCACCGTATACAGCGCATTTGAAACCCCGGcc > 1:5801432/1‑150 (MQ=255) gcgcGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCa < 2:7118713/150‑1 (MQ=255) gcgACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCAAGCAACAAAAGGTGCGGAACCAGCGCACCACCGTATCCAGCACATTGGACAGCCCCGCCAgg > 1:719128/1‑150 (MQ=255) acCGGGGTAATTGAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCtctc < 1:5298233/150‑1 (MQ=255) gggggAATTGAAGCTCTGTTTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTCTCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGa < 2:2941220/150‑1 (MQ=255) gggggAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGa < 1:7567173/150‑1 (MQ=255) gggggAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGa < 2:6339587/150‑1 (MQ=255) gggggAATTGAAGATCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCTAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGa < 1:7567566/150‑1 (MQ=255) ggggAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAg < 2:2764036/150‑1 (MQ=255) aTTGACGCTCTTTTTTTGGTTTTCCTGTGCGGGCCCTTTCGGGGGGTTATCCGCGAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTg < 1:3613169/150‑1 (MQ=255) aTTGAAGCTCTGATTTTCGGGTTCCTGTGCCGGCCCTTTCGCGGGGTTACCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTg < 1:6084975/150‑1 (MQ=255) gCTCTGATTTTCGGTTTCCTGTGCCGGCCCATTCCCGGGGTTATCCGCGAAAGGGCCCG‑CACAGGCCATGCATCCTCACGTGCGGAACCAGCGCACCAGCGTATCCAGCACAATGGGCCGCCCCGCCACGCTCAAGGAGTCCAGgcgcgc > 1:3727052/1‑150 (MQ=255) tctGATTTTCGGTTTCCTGTGCCGGCCCGTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGcgccg > 2:8440197/1‑150 (MQ=255) ttttggggTTGCGTGGGCCGCCCCTTGCGGGGGTATACCCGCCAACGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTg < 1:2245147/144‑1 (MQ=255) ttttGGGTTTGGGGTGCCGGCAGTTTCGGGGGGTTCACCGGTAATGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCAACAGCGTATCCAGCTCATTTGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTgg < 1:5511984/150‑1 (MQ=255) ttttCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTgg < 1:7524473/150‑1 (MQ=255) ttCGGTTGCCTGTGCCGGCCCTTTCGGGGGGTTAGCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGc < 2:3090359/150‑1 (MQ=255) gTTTCCTGTGCCGGCACTTTCGCGGGTTAATCCGCTAAAGGCCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGc < 2:1528444/150‑1 (MQ=255) gTTTCATGTGCCGGCCCATTCGCCGGGGTATCCGCGAAAGGGCCGG‑CACAGGCCAAGCAACATAAGGTGCGGAACCTGCGCACCAGCGTATCCAGCACATTGGACAGCCCGGCCATGCTCAAGGAGTCCTGGCGCGCCCCCTGGGCCAGc > 2:4837183/1‑150 (MQ=255) cTGTGCCGGCCCTTTCGCGGATAACCCCCCGAAAGGGCCGG‑CACACGCCATGCATAATCAGGTGCGGAAACTTCGCACCACCGTAACCAGCTCAAAGGACACCCCGGCCAGGCTCGAGGAGTACAGGCGCGCCCCCCGGGCCAGCTCGGc > 2:680149/1‑150 (MQ=16) cTGTGCCGGCCATTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGc < 1:8154371/150‑1 (MQ=255) tgtgCCGGCCCTTTAGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGcc > 2:737894/1‑150 (MQ=255) tgCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCACTCGGAGTCCTTGCGCGCCGCCTGGGCCAGCTCGGccac > 2:5974108/1‑150 (MQ=255) gCCGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGccacc > 2:5269825/1‑150 (MQ=38) ccGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGccacca > 2:110122/1‑150 (MQ=255) cGGCCCTTTCGCGGATAACCCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGACACCaa > 2:147480/1‑150 (MQ=38) ggCCCTTTCGCGGATAACCCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAAc > 2:9015770/1‑150 (MQ=39) gCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCAATGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACt > 1:2946638/1‑150 (MQ=255) ccTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgc > 1:6893247/1‑150 (MQ=255) ccTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgc > 2:6311576/1‑150 (MQ=255) cTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcg > 1:3992067/1‑150 (MQ=255) cTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcg < 2:8032923/150‑1 (MQ=255) cTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcg > 2:8515989/1‑150 (MQ=255) tttCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 2:7220796/1‑150 (MQ=255) tttCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 2:4744473/1‑150 (MQ=255) tttCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 1:1178938/1‑150 (MQ=255) ttATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTGa < 2:5087118/150‑1 (MQ=255) tATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTGaa > 1:2548907/1‑150 (MQ=255) | GGGGGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTATCCGCGAAAGGGCCGG‑CACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTGAATC > NC_002947/681152‑681449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |