| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 968,881 | A→C | 6.2% | intergenic (‑311/+20) | PP_0831 ← / ← PP_t68 | hypothetical protein/tRNA‑Leu |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 968,881 | 0 | A | C | 6.2% | 749.8 / 26.4 | 242 | intergenic (‑311/+20) | PP_0831/PP_t68 | hypothetical protein/tRNA‑Leu |
| Reads supporting (aligned to +/- strand): ref base A (125/100); new base C (12/4); total (138/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 244 total aligned reads displayed.
CAATACTTTCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCGGCTT > NC_002947/968732‑969030 | aaTACTTTCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGACCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAg > 2:2965235/1‑150 (MQ=255) tttCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCgg > 1:7319164/1‑150 (MQ=255) tttCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCgg > 1:1475971/1‑150 (MQ=255) ttCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGt > 2:1604343/1‑150 (MQ=255) cGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGACTGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGttt < 2:718299/150‑1 (MQ=255) ggAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGtttt > 1:4566914/1‑150 (MQ=255) gAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGttttt > 1:7401589/1‑150 (MQ=255) tatatCTTACTAATTACATATTAATTGATAGCGCACGTGTCGGACATTAGATTTAATTTTTGGGTGGAGGCGCGGTTTTCAGTGGGGCGGCGTCAACTACTTGCTTGAATCGAAGGAACAAAAAAACCGACCGTAAGGTCGGTTTTTTcc < 2:3549417/150‑1 (MQ=255) tatatCTGACGAATGACAGCTTAAGTGCTCGCGCATGGGGCGGCCAATAGAATGCAGGTTTGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTcc < 2:5530551/150‑1 (MQ=255) atacCTGACGAATGACCGATGAAGTGCTAGCGCAAGGGGCGGCCAATACACTGCAGGTCTGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCg < 2:4534561/150‑1 (MQ=255) tGACTAATCACAGCTTATGTGCTTGCGAACGGGGCGGCCATTAGAATGCTGGTATGGGGGGTGGCGGGGGAGTCTGGGGGGCGGCGTCAACGACGGGCGTGAATCGCTGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGAttt < 2:4196714/150‑1 (MQ=255) tGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGAttt > 1:8972844/1‑150 (MQ=255) tGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGAttt > 2:1345305/1‑150 (MQ=255) gACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCGAATAGAATGCAGGTATGGGGGGAGGGGGGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCAGAAAATAACCGACCGTAAGGTCGGTTTTTTCGGGATTTg > 2:6162684/1‑150 (MQ=255) gACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTg > 1:5737597/1‑150 (MQ=255) gAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTg > 2:6454758/1‑150 (MQ=255) aTGACAGCTTACGTCCTCGCGCAAGGGGCGCCCAATAGACTGCCGGTAGGGGGGGCGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGcc < 2:3834550/150‑1 (MQ=255) aTGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGcc > 2:4449309/1‑150 (MQ=255) aTGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGcc < 2:7527486/150‑1 (MQ=255) aGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGGAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGATTCGCAGGCACAAAAAAAGAGACCGTATGGTCGGTTTTTTCGGGATTTGGTGCcgcgtg > 2:8275999/1‑148 (MQ=255) aGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAg > 2:840238/1‑150 (MQ=255) aGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAg > 1:7944432/1‑150 (MQ=255) aGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAg > 1:8540038/1‑150 (MQ=255) gctcacgTGCTAGCGCAAGGGGCGGCCAATCGACCGCCGGTAGGGGGGGAGGCGCGGGCGCCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGCCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAgg < 2:1009497/144‑1 (MQ=255) ttACGTGCTCGCGCACGGGGCGGCCAAGAGAATGCAGGTATGGGGGGCGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGga < 2:4357095/150‑1 (MQ=255) aaGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGgaga > 1:4881434/1‑150 (MQ=255) tAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGaa > 1:521444/1‑150 (MQ=255) tAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGaa > 1:3168110/1‑150 (MQ=255) tAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGaa > 1:6891479/1‑150 (MQ=255) ccacggggCGGCCAATCGACTGGAGGTATGGGGGCAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCAAAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTcc < 2:6233471/146‑1 (MQ=255) aaGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTACGGTCGGTTTTTTCCGGAGTTGGTGCCCCGAGGGAGACTCGAACTCCCa > 2:7095160/1‑150 (MQ=255) aaGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCa > 1:3577295/1‑150 (MQ=255) gggCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTc > 1:2214539/1‑150 (MQ=255) ggcCAATCGAAGGCAGGTCTGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCttt < 2:2992271/150‑1 (MQ=255) gcCACTAGAATGCCGGTATGGGGGGCGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTc < 2:4521303/150‑1 (MQ=255) gcCACTAGAAGGCCGGCAGGGGGGGCGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTc < 2:2546583/150‑1 (MQ=255) gcCAATAGAATGCCGGTCTGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTc < 2:3253768/150‑1 (MQ=255) gcCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTc > 2:5578862/1‑150 (MQ=255) aaTGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACgg > 1:8802789/1‑150 (MQ=255) tGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGAt > 2:7306046/1‑150 (MQ=255) gCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGAtt > 1:6727575/1‑150 (MQ=255) cggccggggggcCGGCGCGGGCGCCCGGGGGGCGGCGTCAACGACGTGCGTGAACCGCAGGCAAAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGAtttt < 1:5026254/144‑1 (MQ=255) aGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGAtttt < 2:4265754/150‑1 (MQ=255) ggTCTGGGGGGAGGCGCGGGAGTCCGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTg < 2:7802414/150‑1 (MQ=255) gTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGa < 2:5779438/150‑1 (MQ=255) ctcagaggggAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGa < 2:7609842/144‑1 (MQ=255) tATGGGGGGTGGCGCGGGAGTCAGGGGGGCGGCGTCAAGGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGaa < 2:8633418/150‑1 (MQ=255) ggAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATccgccg > 2:6797088/1‑150 (MQ=255) aGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCcgcg > 2:1755164/1‑150 (MQ=255) gcgGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTa < 2:2592603/150‑1 (MQ=255) gcgGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACAGATTTTGAATCCGCCGCGTCTa > 1:1086203/1‑150 (MQ=255) cgGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTAc < 2:6597630/150‑1 (MQ=255) tCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTc > 1:8924807/1‑150 (MQ=255) ccgggggcCGGCGTAAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTcc < 1:6543692/148‑1 (MQ=255) ggggCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCa > 1:3272324/1‑150 (MQ=255) gggCGGCGTCCACGCCGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCAt < 2:8084701/150‑1 (MQ=255) gggCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCAt > 1:6312703/1‑150 (MQ=255) ggcggcGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATc > 1:2487564/1‑150 (MQ=255) cgTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGc < 2:1949397/150‑1 (MQ=255) cAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTg < 1:4520298/150‑1 (MQ=255) aaCGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTgg > 2:1241014/1‑150 (MQ=255) aaCGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTgg < 1:4393597/150‑1 (MQ=255) acgacgTGCGTTAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGgc < 2:8764285/150‑1 (MQ=255) acgacgTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGgc < 2:3168110/150‑1 (MQ=255) gacgTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGgcgc > 1:3781412/1‑150 (MQ=255) gacgTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGgcgc > 2:482228/1‑150 (MQ=255) acgTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGgcgcg < 2:1296993/150‑1 (MQ=255) gggcgtgACGCGCCGGCACAAAAACCCCGACCGTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCa < 1:7657946/148‑1 (MQ=255) cgtgAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGta > 1:710382/1‑150 (MQ=255) gtgAATCGCAGGCACAAACAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGtat < 2:4573438/150‑1 (MQ=255) aaTCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATaaa > 2:1208735/1‑150 (MQ=255) cGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAagag < 1:6626954/150‑1 (MQ=255) cGCAGGCAAAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAagag < 1:4049964/150‑1 (MQ=255) gCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAagag < 2:8972844/150‑1 (MQ=255) gCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGcc > 2:7980378/1‑150 (MQ=255) acaAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGta < 1:6027589/136‑1 (MQ=255) acaAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGta > 2:6027589/1‑136 (MQ=255) acaAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGc > 2:7074240/1‑150 (MQ=255) aaaaaaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGc < 1:4192931/148‑1 (MQ=255) aaaaaaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGc < 1:7758732/148‑1 (MQ=255) aaaaaaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGc < 1:2383320/148‑1 (MQ=255) ggaaaaaaCCGACCTTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCt > 2:5798790/3‑150 (MQ=255) ggaaaaaaCCGACCTTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATACGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCt > 1:8323191/3‑150 (MQ=255) ggaaaaaaCCGACCTTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACACCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCt > 1:8287677/3‑150 (MQ=255) aaaaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCTGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTg > 2:5242616/1‑150 (MQ=255) aaaaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTg > 1:7172291/1‑150 (MQ=255) aaaaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTg > 2:8576493/1‑150 (MQ=255) aaaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTgg > 2:2334725/1‑150 (MQ=255) aaaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTgg < 2:3641239/150‑1 (MQ=255) aaaatCCTACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCACCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATGCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggt > 2:5080849/1‑150 (MQ=255) aaacCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtc < 1:4210842/150‑1 (MQ=255) aaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtc > 1:1908587/1‑150 (MQ=255) aaaCCGACCTTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcg > 1:3696799/1‑150 (MQ=255) aaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcg < 1:4268783/150‑1 (MQ=255) aaCCGACCTTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcgg > 2:3771647/1‑150 (MQ=255) accgaccgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcggt < 2:521425/150‑1 (MQ=255) accgaccgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcggt < 1:2965235/150‑1 (MQ=255) ccgacctTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcggtc > 2:2163480/1‑150 (MQ=255) ccgaccgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAAACCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcggtc < 2:4881694/150‑1 (MQ=255) aGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCGGCtt < 1:1345305/150‑1 (MQ=255) | CAATACTTTCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCG‑AAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCGGCTT > NC_002947/968732‑969030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |