| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,105,450 | A→T | 9.8% | intergenic (+211/‑76) | hisG → / → hisD | ATP phosphoribosyltransferase/histidinol dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,105,450 | 0 | A | T | 9.8% | 612.6 / 8.9 | 222 | intergenic (+211/‑76) | hisG/hisD | ATP phosphoribosyltransferase/histidinol dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (126/68); new base T (2/26); total (128/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.33e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 226 total aligned reads displayed.
CCCGCGCGGATGGACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGACATCTGGATCATCTGCT > NC_002947/1105303‑1105599 | gcgcgGATGGACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGAtc < 2:113472/150‑1 (MQ=255) gcgGATGGACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGAtcgt < 2:2779946/150‑1 (MQ=255) cgGATGGACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGAtcgtc < 2:7994456/150‑1 (MQ=255) ggATGGACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAGATGAGCATACCGAGCCTGTTTTTATCGTAGCTTGAtcgtcg > 1:4869883/1‑150 (MQ=255) ggATGGACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGAtcgtcg > 1:8217089/1‑150 (MQ=255) gATGGACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGACAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTcgc < 2:8163099/150‑1 (MQ=255) gATGGACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTcgc < 2:8324306/150‑1 (MQ=255) gATGGACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTcgc < 1:7320351/150‑1 (MQ=255) gACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAg < 2:5935891/150‑1 (MQ=255) cTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGc > 1:8526576/1‑150 (MQ=255) tGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCa < 1:6233127/150‑1 (MQ=255) gTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACt > 1:1179321/1‑150 (MQ=255) gTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACt > 2:5511112/1‑150 (MQ=255) gTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACt > 1:4718449/1‑150 (MQ=255) ttGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCg > 2:9089383/1‑150 (MQ=255) gggATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGca > 2:632513/1‑150 (MQ=255) gggATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACGTTTCGca > 2:5209718/1‑150 (MQ=255) gAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTa > 1:4622602/1‑150 (MQ=255) gAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTa > 1:3568699/1‑150 (MQ=255) aaacGTCGCCGCGGGGCTATAATGAAACAACCAAAACGGGCGTGTACGGGCGGGGGG‑CGCGCCCGACTTTGCTGGTTGAAATTGAGAATACGGAGCCTTTTTTTAACGTAGATTGATCGTCGCGCAGCCACTTTTCGCACAATCCCCTAg < 2:2676792/150‑1 (MQ=255) atgatCGCCGCTCGGCGATCATGCAAGAACGAAAACAGGCGAGGACCGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAgg > 1:8059939/5‑150 (MQ=255) gCCGCGCGGCGTACATGAAAGACCGAAACCCGGCGTGGAACGGCCGGGGT‑CGCGCCCGACTTTGCGGGTTGCAAATGAGCATACCGAGCCTGTTTTTACCGTCGCTTGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCt < 2:4283752/150‑1 (MQ=255) cGAGCGGCGCTCATGCAAGACCGAAAACCGGCGAGGAACGGCGGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATCCCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGAAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGa < 2:6630884/150‑1 (MQ=255) gAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAg > 1:3105907/1‑150 (MQ=255) cggcgAACATGCAACAACGAAAACCGGCTTGGACCGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCCGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCAt < 2:5646346/150‑1 (MQ=255) ggctATCTTGCAAGAACTAAAACTGGCGAGTAACGGCGGGGGT‑CGCGCCCGACTTTGCTGGTTGAAAATGAGAATACCGAGCTTTTTTTTAACTTCCCTTGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCAtt < 2:1013697/150‑1 (MQ=255) gATCATGCAAGAACGAAAACAGGCGAGTAACGGCCGGGGT‑CGCGCCCGACTTTGCTGTTTGCAATTGAGCATACGGAGCCTTTTTTTAACTTAGCTTGATCGGCGCGCTGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGc < 2:3656142/150‑1 (MQ=255) aTCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCt > 1:8925917/1‑150 (MQ=255) tcttGCAATAACTAAAACCGGCGCGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGAATGTTCGACGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTa < 2:3214564/147‑1 (MQ=255) aTGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAat > 2:7244192/1‑150 (MQ=255) gCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAatat > 1:5004560/1‑150 (MQ=255) gCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAatat > 2:3293794/1‑150 (MQ=255) gCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGAAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAatat > 2:8446233/1‑150 (MQ=255) cAATAACTAAAACCGGCTTGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGAAAATGAGCATACCGCGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATAtt < 2:7660347/150‑1 (MQ=255) cAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATAtt > 2:6825231/1‑150 (MQ=255) aaGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTa > 2:4501259/1‑150 (MQ=255) aaGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTa > 1:2507371/1‑150 (MQ=255) agacctaaaaCCGGCGCGGCCCGGCGGGGGT‑CGCGCCCGACTTTGCTGGTTGCAATTGAGCATCCCTAGCCTTTTTTTACCGTAGCATGACCGCCGCGCCGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTAc < 1:6003343/144‑1 (MQ=255) aaCCAAAACCGGCTTGGAACGGCGGGGGT‑CGCGCCCGACTTTGCTGTTTGAAAATGAGCATACCGAGCCTTTTTTTAACGTAGCATGATCTTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGa < 2:5845924/150‑1 (MQ=255) gAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGc > 1:3924843/1‑150 (MQ=255) gAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGc > 1:1558278/1‑150 (MQ=255) gAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGc > 2:4058019/1‑150 (MQ=255) cggCGAGGACCGGCGGGGGT‑CGCGCCCGACTTGGTTGGTTGAAAATGAGAATACCGAGCCTGTTTTTAAGGTAGCATGATGGTCGCGCCGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGc < 2:4803466/149‑1 (MQ=255) aGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGc > 1:6849410/1‑150 (MQ=255) aGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGc > 2:7739143/1‑150 (MQ=255) aGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGc > 2:8128980/1‑150 (MQ=255) gCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCa > 1:914832/1‑150 (MQ=255) gCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCa > 2:3258374/1‑150 (MQ=255) gAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATg > 1:1967387/1‑150 (MQ=255) gAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATg > 2:1522230/1‑150 (MQ=255) tgcaCGGGCGGGGTGCGCGCCCTAATTTGGTGTTTCAAATTCAGAATACCGTGCCTTTTTTTAACTTAGATTTATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGa < 1:2756205/147‑1 (MQ=255) gAACGGCGGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGCGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAAGCCCTCGCCATGAcc < 2:565419/150‑1 (MQ=255) accggcggGGGT‑CGCGCCCGACTTTGCTGGTTGCAATTGAGCAACCCGCGCCTTTTTTTACCGTCGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCg < 2:1036071/148‑1 (MQ=255) aCGGCCGGGTG‑CGCGCCCGACTTTGCTGTTTGAAAATGAGCATACCGAGCATGTTTTTAACGTAGAATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCgt < 2:8856275/150‑1 (MQ=255) aCGGCCGGGGT‑CGCGCCCTAATTTGCTTTTTTAAAATTACAATACATACCATTTTTTAAACTTACAATTATCTTCGCCCAGCCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCgt < 1:5315492/150‑1 (MQ=255) aCGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCgt > 2:6141841/1‑150 (MQ=255) aCGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCgt > 2:6414378/1‑150 (MQ=255) gCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGACCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTc < 2:8699022/150‑1 (MQ=255) cgggggT‑CGCGCCCGACTTTGCTGGTTGCAAATTAGCATACCGCGCCTGTTTTTAACGTAGCTTGATCGTGGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTcc < 2:8653574/148‑1 (MQ=255) cGGGGA‑CGCCCCCAAATTTGATGTTTCAAAATCACCAAACCCAGCATTTTTTTAACGTACATTTATCGTCGCGCAGCCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCa < 1:9055524/150‑1 (MQ=255) gggT‑GGCGCCCGATTTTGCTGTTTTCAATTGTGAATCCGGCGCGTTTTTTTAACGTCGCTTGATGGGCGCGCCGCCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACt < 1:149320/150‑1 (MQ=255) gggT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACt > 1:6863614/1‑150 (MQ=255) ggtccgccCCCGACTTTGCTGTTTGAAATTGAGCATACCGCGCCTTTTTTTACCTTAGCTTTATCGTCGCGCCGCCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACt < 1:4243530/146‑1 (MQ=255) cgcgCCCGACTTTGCTGGTTGCAAATGAGAATACCGAGCCTGTTTTTAACGTAGCTTGATGGTCGCGCCGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCaa < 2:1909704/150‑1 (MQ=255) gcCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTg > 1:8036442/1‑150 (MQ=255) ccctattttGGTGGTTGAAATTTAGAATACCGAGCCTTTTTTTAAGGTAGCATGTTCGTCGCGCTGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGc < 1:8190978/144‑1 (MQ=255) ccGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGcc > 2:6538888/1‑150 (MQ=255) ccaatgggCTGGTTGCAAAGGCCCATCCCGTGCCTGTTTTTACCGTCGCAGGATCGTCGGCCCGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGccc < 1:1113947/143‑1 (MQ=255) gtgggTTGAAATTCAGCATCCCGCGCCTTTTTTTACCTTAGCTTTATGGGCGCGCCGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCaa < 1:7772820/147‑1 (MQ=255) tGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAAcg > 2:6027945/1‑150 (MQ=255) gTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAAcgcc > 2:231618/1‑150 (MQ=255) tGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGAAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAAcgccgc < 2:128818/150‑1 (MQ=255) gCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCt > 1:2347394/1‑150 (MQ=255) aaaTGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGa > 1:8433184/1‑150 (MQ=255) aaaTGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGa > 2:184867/1‑150 (MQ=255) aaaTGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGa > 2:1627086/1‑150 (MQ=255) aaaTGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGa > 2:1379129/1‑150 (MQ=255) tGAGAATCCGGAGCGTTTTTTTAAGGTAGCTTTATCGTCGCGCCGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATcc < 1:5608688/150‑1 (MQ=255) gAGCATACCGAGCCTTTTTTTAACGTAGAATTATCGTGGCGCCGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCg < 1:6908234/150‑1 (MQ=255) tagcGAGCGTGTTTTTAAGGTAGGTTGATCGTCGCGCAGGCAGTTTTCGCTCAATCCCCTAGTGCGCGTGAGCATTCGCTAATATTAGGAGGCCCTCGCCATGACCGTGTCCTCTGCAATTGCCCGTCTGAACGCCGCTGATCCGGAttt > 2:6468097/4‑150 (MQ=255) tACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGAttt > 2:5160990/1‑150 (MQ=255) tACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGAttt > 1:8763960/1‑150 (MQ=255) ccGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCg < 2:3505663/150‑1 (MQ=255) gAGCCTTTTTTTAACGTAGCTTGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGcc < 2:2598923/150‑1 (MQ=255) gAGCCTTATTTTAACTAACCATGATCGTCGCCCAGCCACTATTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGcc < 2:7216955/150‑1 (MQ=255) aGCCTTTTTTTAACGTAGCATTATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGccc < 2:4385528/150‑1 (MQ=255) aGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGccc > 1:4760237/1‑150 (MQ=255) aGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGccc > 2:7415198/1‑150 (MQ=255) ccTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGa > 1:2376193/1‑150 (MQ=255) ctttttttACCTTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGAc < 1:4034927/147‑1 (MQ=255) cTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGAc > 1:3222133/1‑150 (MQ=255) cTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGAc > 1:4623414/1‑150 (MQ=255) tttAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGACATCTg > 2:1788431/1‑150 (MQ=255) tttAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGACATCTg > 1:972468/1‑150 (MQ=255) taagttAGCATGTTGGGCGCGCCGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGACATCTGGa < 1:7855083/145‑1 (MQ=255) tAACGTTGCATGATCGTCGCGACGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGACATCTGGa < 1:5921561/150‑1 (MQ=255) gTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGACATCTGGatcat > 2:7647988/1‑150 (MQ=255) gTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGACATCTGGatcat > 2:8902443/1‑150 (MQ=255) gTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGACATCTGGatcat > 2:8996227/1‑150 (MQ=255) aTGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGACATCTGGATCATctgct > 1:4413605/1‑150 (MQ=255) | CCCGCGCGGATGGACTGGTAGCTTGGGATAGTGCGAAAAGTCGCCGAGCGGCGATCATGCAAGAACGAAAACAGGCGAGGAACGGCCGGGGT‑CGCGCCCGACTTTGCTGGTTGCAAATGAGCATACCGAGCCTGTTTTTAACGTAGCATGATCGTCGCGCAGGCACTTTTCGCACAATCCCCTAGGGCGCCTGAGCATTCGCTAATATTACGAGGCCCTCGCCATGACCGTGTCCACTGCAATTGCCCGTCTCAACGCCGCTGATCCGGATTTCGCCCGACATCTGGATCATCTGCT > NC_002947/1105303‑1105599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |