Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,114,905 G→C 7.7% intergenic (‑94/+85) rlmF ← / ← valS ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,114,9050GC 7.7% 728.5 / 37.4 221intergenic (‑94/+85)rlmF/valSribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
Reads supporting (aligned to +/- strand):  ref base G (108/96);  new base C (8/9);  total (116/105)
Fisher's exact test for biased strand distribution p-value = 8.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 228 total aligned reads displayed.

CGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCA  >  NC_002947/1114757‑1115054
                                                                                                                                                    |                                                                                                                                                      
 gTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACCGGAGGGTGgcg                                                                                                                                                      >  2:854126/1‑150 (MQ=255)
  tAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGgcgc                                                                                                                                                    <  2:3089364/150‑1 (MQ=255)
   aGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGcc                                                                                                                                                   <  2:2950112/150‑1 (MQ=255)
   aGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGACGCTCCCACAGGAGGGTGGCGcc                                                                                                                                                   <  2:3403959/150‑1 (MQ=255)
       aCCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGa                                                                                                                                               <  1:2935323/150‑1 (MQ=255)
        cccTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGaa                                                                                                                                              <  2:6851142/150‑1 (MQ=255)
         ccTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAg                                                                                                                                             >  2:2685725/1‑150 (MQ=255)
            ggtggCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGtt                                                                                                                                          <  1:1083335/150‑1 (MQ=255)
            ggtggCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGtt                                                                                                                                          <  1:6461540/150‑1 (MQ=255)
             gtggCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTg                                                                                                                                         <  2:5266378/150‑1 (MQ=255)
             gtggCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTg                                                                                                                                         >  2:5575373/1‑150 (MQ=255)
             ctggccgagtccgaacaggccctggccaacttcaccgagcagcatgcgcggattgcagcgctgtaatcactagagagaccgttggggccgctgcgcagcccttttGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTg                                                                                                                                         >  1:6171523‑M1/106‑150 (MQ=255)
                   gTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCg                                                                                                                                   <  2:105041/150‑1 (MQ=255)
                   gTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCg                                                                                                                                   <  2:7152491/150‑1 (MQ=255)
                     gtccgaacaggccctggccaacttcaccgagcagcatgcgcggattgcagcgctgtaatcactagagagaccgttggggccgctgtacggccctttcGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTc                                                                                                                                 >  1:6651850‑M1/98‑150 (MQ=255)
                         gaacaggccctggccaacttcaccgagcagcatgcgcggattgcagcgctgtaatcactagagagaccgttggggccgctgtacggccctttcGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCtgt                                                                                                                             >  1:2919809‑M1/94‑150 (MQ=255)
                         gaacaggccctggccaacttcaccgagcagcatgcgcggattgcagcgctgtaatcactagagagaccgttggggccgctgtacggccctttcGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCtgt                                                                                                                             >  1:5261074‑M1/94‑150 (MQ=255)
                         cgGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgt                                                                                                                             >  2:5670891‑M2/1‑144 (MQ=255)
                         cgGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgt                                                                                                                             >  2:6596804‑M2/1‑144 (MQ=255)
                         cgGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgt                                                                                                                             >  2:317367‑M2/1‑144 (MQ=255)
                          gggTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtg                                                                                                                            >  2:3082558‑M2/1‑143 (MQ=255)
                          gggTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtg                                                                                                                            >  1:9070717‑M2/1‑143 (MQ=255)
                          aacaggccctggccaacttcaccgagcagcatgcgcggattgcagcgctgtaatcactagagagaccgttggggccgctgtacggccctttcGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCtgtg                                                                                                                            >  2:8959290‑M1/93‑150 (MQ=255)
                          aacaggccctggccaacttcaccgagcagcatgcgcggattgcagcgctgtaatcactagagagaccgttggggccgctgtacggccctttcGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCtgtg                                                                                                                            >  2:1567030‑M1/93‑150 (MQ=255)
                           ggTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATCCGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgg                                                                                                                           >  2:3934212‑M2/1‑142 (MQ=255)
                           acaggccctggccaacttcaccgagcagcatgcgcggattgcagcgctgtaatcactagagagaccgttggggccgctgtacggccctttcGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTgg                                                                                                                           >  2:2884944‑M1/92‑150 (MQ=255)
                           acaggccctggccaacttcaccgagcagcatgcgcggattgcagcgctgtaatcactagagagaccgttggggccgctgtacggccctttcGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTgg                                                                                                                           >  2:4786862‑M1/92‑150 (MQ=255)
                             tGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTTTACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtggga                                                                                                                         >  1:1453965‑M2/1‑140 (MQ=255)
                             tGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtggga                                                                                                                         >  1:6886651‑M2/1‑140 (MQ=255)
                             tGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtggga                                                                                                                         >  1:6777305‑M2/1‑140 (MQ=255)
                              gCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggag                                                                                                                        <  1:3861976‑M2/150‑12 (MQ=255)
                               gccctggccaacttcaccgagcagcatgcgcggattgcagcgctgtaatcactagagagaccgttggggccgctgtacggccctttcGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGc                                                                                                                       >  2:4057411‑M1/88‑150 (MQ=255)
                                  ggtgggtTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGAGACAAGGGCGCTGCCACAGGTGGGTGGCGCCGTGATGGTTGGGGGCGtcctgtgggagcggc                                                                                                                    <  1:3051892‑M2/150‑16 (MQ=255)
                                     gggtTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggcctt                                                                                                                 >  2:9068870‑M2/1‑132 (MQ=255)
                                     gggtTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCtcctgtgggagcggcctt                                                                                                                 >  1:2699453‑M2/1‑132 (MQ=255)
                                          tGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtc                                                                                                            >  2:1793801‑M2/1‑127 (MQ=255)
                                            ttCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCATGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccgtgtgtcgc                                                                                                          <  2:8978710‑M2/150‑26 (MQ=255)
                                                 ggTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCtcctgtgggagcggccttgtgtcgcaaaag                                                                                                     >  2:5036788‑M2/1‑120 (MQ=255)
                                                   tCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGAGCCGTGCTGTGGGAGCGGCCTTGTGTAGCGAAAtgg                                                                                                   >  1:2246644/1‑150 (MQ=255)
                                                          aGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACa                                                                                            >  1:5637254/1‑150 (MQ=255)
                                                               ccAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGc                                                                                       <  1:5303495/150‑1 (MQ=255)
                                                                cAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCGCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGcc                                                                                      >  1:2655093/1‑150 (MQ=255)
                                                                 aGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGccc                                                                                     >  1:6058995/1‑150 (MQ=255)
                                                                      tctccGAGCGGTGGCTTGTAGACCCTGGGGCTGCTGCGCCGCCCTTTTGCGACACAAGGCCGCTCCCACCGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACg                                                                                <  2:7837350/146‑1 (MQ=255)
                                                                       ataCGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGCGCGGCCTTGTGTCGCGAACGGGCCGTACAGCGGCCCCAACgg                                                                               >  1:6982062/1‑150 (MQ=255)
                                                                               ggTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTa                                                                       <  2:5056368/150‑1 (MQ=255)
                                                                                gTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTGGAAGGTTGGCGCCGTCCGGTGGGAGCGGCCTGGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAg                                                                      >  2:8735650/1‑150 (MQ=255)
                                                                                 tGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGt                                                                     >  2:2093910/1‑150 (MQ=255)
                                                                                  ggCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTg                                                                    <  2:4401550/150‑1 (MQ=255)
                                                                                  ggCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCGTGTGTGGCGAAAGGGCCGTACAGCGGCCCCCACGGTCTCTCGAGTg                                                                    >  1:8641460/1‑150 (MQ=255)
                                                                                   gCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTTCAGCGGCCCCAACGGTCTCTCTAGTGa                                                                   >  2:8311011/1‑150 (MQ=255)
                                                                                     ttGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGAtt                                                                 >  1:6294865/1‑150 (MQ=255)
                                                                                           gcaaaagggCTGCGCAGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAgcg                                                           >  1:1868010/7‑150 (MQ=38)
                                                                                             ccTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCGGTGGGAGCGGCCGGGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCGAGTGATTACAGCGCt                                                         >  2:290487/1‑150 (MQ=255)
                                                                                             aaaagggCTGCGCAGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTGCGGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGGCTCTCTAGTGATTACAGCGCt                                                         >  1:3915456/5‑150 (MQ=38)
                                                                                             aaaagggCTGCGCAGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCt                                                         >  2:1359677/5‑150 (MQ=255)
                                                                                                     tgctgcGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCcg                                                 >  2:6042625/1‑150 (MQ=255)
                                                                                                       ctgcGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCACTCcgcg                                               >  2:7112316/1‑150 (MQ=255)
                                                                                                        tgcGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCgcgc                                              >  1:8844100/1‑150 (MQ=255)
                                                                                                           gcAGCCCTTGTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGGTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCAtg                                           <  1:7987539/150‑1 (MQ=255)
                                                                                                                 ctttcGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTc                                     <  2:4700298‑M1/145‑1 (MQ=255)
                                                                                                                 cTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTc                                     >  2:2754380/1‑150 (MQ=255)
                                                                                                                 cTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTc                                     <  1:4341083/150‑1 (MQ=255)
                                                                                                                  ttttGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCg                                    >  1:3998806/1‑150 (MQ=255)
                                                                                                                  ttttGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCg                                    >  1:4861389/1‑150 (MQ=255)
                                                                                                                     tGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTg                                 <  1:2754039/150‑1 (MQ=255)
                                                                                                                       CGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTgac                               <  2:7624254‑M1/150‑2 (MQ=255)
                                                                                                                        GACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAg                              <  2:2406140‑M1/150‑1 (MQ=255)
                                                                                                                        GACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAg                              <  2:6463684‑M1/150‑1 (MQ=255)
                                                                                                                          CACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGtt                            <  1:8221382‑M1/150‑1 (MQ=255)
                                                                                                                          CACAAGGCCGCTCCCACAGGAGGGTGGCGCCGTGAAGGTTGGCGCCGTCCGGTGGGCGCGGCCGGGGGTCGCGCAAGGGCCGTACAGCGGCCCCAACGGTCGCGCTAGTGATTACAGCGCGGCAATCCGCGCCTGCGGCTCGGTGaaggt                            <  2:6276727‑M1/150‑3 (MQ=255)
                                                                                                                           ACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTg                           >  2:2654927‑M1/1‑150 (MQ=255)
                                                                                                                            CAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTgg                          <  1:8300112‑M1/150‑1 (MQ=255)
                                                                                                                             AAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGc                         <  2:5751292‑M1/150‑1 (MQ=255)
                                                                                                                             AAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGc                         <  1:7335586‑M1/150‑1 (MQ=255)
                                                                                                                                 CCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAgg                     >  1:5575373‑M1/1‑150 (MQ=255)
                                                                                                                                 CCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGaa                               <  2:8298931‑M1/140‑1 (MQ=255)
                                                                                                                                  CGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAggg                    <  1:6587345‑M1/150‑1 (MQ=255)
                                                                                                                                    CTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGcc                  <  1:3525261‑M1/150‑1 (MQ=255)
                                                                                                                                     tCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcgaaagggccgcgcagcagccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaagcccaccctgcc                 <  2:5454244‑M2/150‑115 (MQ=255)
                                                                                                                                     tCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcaaaagggctgcgcagcagccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaaacccaccctgca                 <  1:7026483‑M2/150‑115 (MQ=255)
                                                                                                                                     tCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtccggtgggagcggccttgtgtcgcaaaagggctgcgcagcagccccagggtcttcaagccaccgctcggatagggctggacactgccatgaccccgaacaaacccaccctgca                 <  2:7398708‑M2/150‑115 (MQ=255)
                                                                                                                                     TCCCACTGGAGGGTGGCGCCATGAAGGTTGGCGCCGTCCTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCt                 >  1:854126‑M1/1‑150 (MQ=255)
                                                                                                                                        cacaGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcgaaagggctgcgcagcagccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaaacccaccctgcaccc              <  2:3007051‑M2/150‑118 (MQ=255)
                                                                                                                                        cacaGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcaaaagggctgcgcagcagccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaaacccaccctgcaccc              <  1:6250829‑M2/150‑118 (MQ=255)
                                                                                                                                        cacaGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcaaaagggctgcgcagcagccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaaacccaccctgcaccc              <  1:4792404‑M2/150‑118 (MQ=255)
                                                                                                                                        CACCGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGtt              >  1:4965246‑M1/1‑150 (MQ=255)
                                                                                                                                        CACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGtt              <  1:1498618‑M1/150‑1 (MQ=255)
                                                                                                                                        CACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCATGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGtt              >  2:7952164‑M1/1‑150 (MQ=255)
                                                                                                                                         ACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTc             <  2:1258444‑M1/150‑1 (MQ=255)
                                                                                                                                         ACAGGAGGGTGGCGCCATGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTc             <  1:2844381‑M1/150‑1 (MQ=255)
                                                                                                                                          caGGAGGGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcgaaagggctgcgcagcagccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaaacccaccctgcacccgc            <  1:2097098‑M2/150‑120 (MQ=255)
                                                                                                                                           aggaggGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcaaaagggctgcgcagcagccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaaacccaccctgcacccgcg           <  1:7471371‑M2/150‑121 (MQ=255)
                                                                                                                                           AGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCgg           <  1:2324716‑M1/150‑1 (MQ=255)
                                                                                                                                            GGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGa          <  1:4383866‑M1/150‑1 (MQ=255)
                                                                                                                                             gaggGTGGCGCCTTGAAGGTTGGCGCCGtcctgtgggagcggccttgtgtcgcgaaagggccgtacagcggccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaaacccaccctgcacccgcgca         <  1:776428‑M2/150‑123 (MQ=255)
                                                                                                                                               gggTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTc       <  2:1679481/150‑1 (MQ=255)
                                                                                                                                                ggTGGCGCCTTGAAGGTTGGCGCCGtcctcctgtgggagcggccttgtgtcgcaaaagggctgcgcagcagccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaaacccaccctgcacccgcgca      <  1:3570042‑M2/150‑126 (MQ=255)
                                                                                                                                                ggTGGCGCCTTGAAGGTTGGCGCCGtcctcctgtgggagcggccttgtgtcgcaaaagggctgcgcagcagccccagggtcttcaagccaccgctcgtatagggctggacactgccatgaccccgaacaaacccaccctgcacccgcgca      <  1:1376837‑M2/150‑126 (MQ=255)
                                                                                                                                                ggTGGCGCCTTGAAGGTTGGCGACGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCg      >  2:7340866/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
CGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCCTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGAGGGTGGCGCCTTGAAGGTTGGCGCCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCA  >  NC_002947/1114757‑1115054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: