| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,210,834 | T→A | 7.6% | intergenic (+18/+19) | ytnA → / ← PP_1060 | amino acid permease YtnA/glutamate synthase large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,210,834 | 0 | T | A | 7.6% | 557.6 / 28.5 | 198 | intergenic (+18/+19) | ytnA/PP_1060 | amino acid permease YtnA/glutamate synthase large subunit |
| Reads supporting (aligned to +/- strand): ref base T (52/122); new base A (7/8); total (67/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.79e-01 | |||||||||||
Only 100 of 208 total aligned reads displayed.
ATGGCGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGA > NC_002947/1210685‑1210983 | tGGCGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCttt < 2:2934919/150‑1 (MQ=255) tGGCGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCttt > 2:9069547/1‑150 (MQ=255) ggCGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTg < 1:959041/150‑1 (MQ=255) cGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCg < 1:24145/150‑1 (MQ=255) tACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGc < 1:7507303/150‑1 (MQ=255) tACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGc < 2:3984089/150‑1 (MQ=255) aCTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGcc < 1:5682774/150‑1 (MQ=255) aCTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGcc < 1:331071/150‑1 (MQ=255) cTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCAAAGCGGccc < 2:4009920/150‑1 (MQ=255) cTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCAAAGCGGccc < 2:5119092/150‑1 (MQ=255) ttCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGcccc < 1:1761183/150‑1 (MQ=255) ttCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGcccc > 2:6465249/1‑150 (MQ=255) ttCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGcccc < 1:4605883/150‑1 (MQ=255) ttCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCAAAGCGGcccc < 1:1774482/150‑1 (MQ=255) ttCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCAAAGCGGcccc < 2:4815711/150‑1 (MQ=255) ttCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCAAAGCGGcccc < 2:4736506/150‑1 (MQ=255) cGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAg < 2:2145716/150‑1 (MQ=255) gAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCGTTTCGGCCCCacc > 2:3181792/1‑148 (MQ=255) gAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGc < 2:6211597/150‑1 (MQ=255) gAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTAGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGACGAAAGACGCACAAGGGGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCCCGGTGCGGGCACAGc > 2:1516670/1‑150 (MQ=255) gAGGATACGCGTGTGGCCCTGAACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGc < 2:5867011/150‑1 (MQ=255) gATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCGTTGCGGCCCCCCCGtt > 1:6773261/1‑150 (MQ=255) tACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTtct < 1:8669894/150‑1 (MQ=255) gcgTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTtctctc < 1:2168692/150‑1 (MQ=255) cgTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCa < 1:7174492/150‑1 (MQ=255) gtgtGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAg < 1:8059986/150‑1 (MQ=255) cccTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCGTTTCGGCCCCACCGTTGTAACAGgccgcc > 2:3480209/1‑150 (MQ=255) ccTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCa < 1:4607426/150‑1 (MQ=255) cTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCGGTGCGGCCCCACCCGTGTCTCAGgccgcccc > 2:5580504/1‑148 (MQ=255) gTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACtt < 2:8437594/150‑1 (MQ=255) cATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGc < 1:2264353/150‑1 (MQ=255) aTCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTCGGCCCCACCCGTCACTCAAGCCCCCCCATCGcg > 1:9015990/1‑149 (MQ=255) tCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCGGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCCGCGGGCTCGCCGGCCGCCCCGACGCtg > 2:2173548/1‑150 (MQ=255) ggCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGTCCCAGCGTTCTCTCAGGCCGCCACTTCGCtgtg > 1:5024749/1‑150 (MQ=255) gCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGc < 2:4348253/150‑1 (MQ=255) gCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGc < 2:453229/150‑1 (MQ=255) gCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGAACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGc < 2:1476678/150‑1 (MQ=255) ggCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCt < 2:179255/150‑1 (MQ=255) tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGaaa < 2:3198834/150‑1 (MQ=255) tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGaaa < 2:4842988/150‑1 (MQ=255) gACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCggg < 1:1651126/150‑1 (MQ=255) gACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCggg < 2:7040107/150‑1 (MQ=255) gACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCggg < 2:7364883/150‑1 (MQ=255) aCAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGc < 1:1206191/150‑1 (MQ=255) tGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTTCGGCCCCACCGGTCTCTCAGGCCGCCCCATAGCTGTGCGGCTCCAAAAATTCCGCCCCGGCCAGt > 2:5064967/1‑150 (MQ=255) gCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGtt < 1:3207105/150‑1 (MQ=255) tGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCGTTGCGGCCCCCCCGGTATCTCAGGCCCCCCCATAGCGGTGCGGCGCGAAAAAGTACCCCCCGGccccatgc > 1:7575270/1‑144 (MQ=255) gTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCGTTGGGGCCCCACCCGGATCACAGGCCGCCACAACGCAGTTCGGCGCGAAAAAGTACGCCCCGGccccgtggc > 1:611786/1‑143 (MQ=255) gTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCCCGTTGCGGCCCCCCCCTTCTCACAGGCCCCCACAACGCGGTGCGGCTCGAAACTGTACGCCCCGGCCACtttgc > 2:6629524/1‑147 (MQ=255) tATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCGGTTGGGCCCCAGCGGTCTCTCCCGCCGCCCCAGCGCGGGGGGGCGCGAAACAGTGCGCCCGGGCCCGGTGCca > 2:338356/1‑150 (MQ=255) cacGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCCCGTTTCGGCCCCCCCCGTGTCTCACGCCCCCACAACCAGGTGGGGCGCGGAACAGTCCCCCCCGGCCCCGTGCcacaaac > 2:435530/1‑147 (MQ=255) cGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCcgc < 2:6089383/150‑1 (MQ=255) tCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGaa < 2:1221906/150‑1 (MQ=255) ccGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAAt < 2:7921238/150‑1 (MQ=255) cGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATa < 2:2673304/150‑1 (MQ=255) cGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATa < 2:8166559/150‑1 (MQ=255) cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGaa < 2:8349177/150‑1 (MQ=255) aaaGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGtt < 1:6063795/150‑1 (MQ=255) aGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGCCGTGGGGCCGCTGGGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCa < 1:4066841/150‑1 (MQ=255) gACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCAc < 1:256327/150‑1 (MQ=255) aCGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCAcc < 2:8044245/150‑1 (MQ=255) acaAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGc < 2:6996360/150‑1 (MQ=255) acaAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGc < 2:6750094/150‑1 (MQ=255) ggTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGt < 1:1015616/150‑1 (MQ=255) tgtgACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTca < 2:4628362/150‑1 (MQ=255) tgtgACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTca < 1:1165485/150‑1 (MQ=255) gACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTcagca < 2:879072/150‑1 (MQ=255) gACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTcagca < 1:3480209/150‑1 (MQ=255) gAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTGTGCCCCAGCGTTGTGTCGGGGCGGCACTTGGCTGTGGGGGTGGAAAATGTGCGCCCGGGGCCGTTTGCACAAACGCGCATATAACTTGCCGTTGACATCGGCGGTGAGAAGCt > 2:6038539/1‑150 (MQ=255) cAGCCTCCTGACCTGACGTGGGGGCGCGGTGGGGCCCCAGCGTTGTCTCAGGCCGCCACTTCGCTGTGGGGCGCGCAAATGTGCGCCCGGGCCCGTTGCCCAATACGCGAATAGTACAGGGCCTTGACCGCGCCCGGCAgcaccgcacca > 2:741767/1‑149 (MQ=255) cAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCt < 1:6571290/150‑1 (MQ=255) gCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTgg < 1:154628/150‑1 (MQ=255) cctcctGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGc < 1:5382444/150‑1 (MQ=255) cctcctGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGc < 1:5413306/150‑1 (MQ=255) tgacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCaa < 2:8639269/150‑1 (MQ=255) tgacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCaa < 2:2453663/150‑1 (MQ=255) tgacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCaa < 1:3806134/150‑1 (MQ=255) cctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGaa < 2:7455045/150‑1 (MQ=255) agaacgctGGGGCCGCAAAGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCCGGCCAGTTGCCCCATCCGCGAATAGAACTGGCCGTTTACCACGCCGGGCAACAGCGCCCCGGGCTTCAAGaa > 1:4951964/8‑150 (MQ=255) tgacGTGGGGCCGCTTTGCGGCCCCAGCCTTCTCTCAGGCCGCCACATCGCTGTTCGGCTCGAAAAATTCCCCCCGGGCCAGTTGCCACAACCCCGAAAAGAACAGGCCGTTCACCACGCCGGTCAGCACCTCACCAGGCTTCAAGAaca > 2:2825768/1‑150 (MQ=255) aacgctGGGGCCGCAAAGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAaca > 2:7229430/6‑150 (MQ=255) acGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGaa < 1:4780747/146‑1 (MQ=255) acGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAAcaca < 2:4661583/150‑1 (MQ=255) gTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCa < 2:890280/77‑1 (MQ=255) gTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATg > 1:8912782/1‑150 (MQ=255) gggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCaa > 1:1318230/1‑149 (MQ=255) gggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCAt < 2:8920317/150‑1 (MQ=255) gggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCAt > 2:1298314/1‑150 (MQ=255) gggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCAt > 1:1373095/1‑150 (MQ=255) gggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCAt > 2:8540724/1‑150 (MQ=255) gCCGCTTTGCGGCACCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCAACATCCGCGAATAGACCTGGCAGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCt > 2:6798761/1‑150 (MQ=255) aacacgttGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCt > 2:8572273/7‑150 (MQ=255) cGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCCGc > 1:4295788/1‑150 (MQ=255) gCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGc < 1:8344662/74‑1 (MQ=255) gCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCg > 2:3567855/1‑150 (MQ=255) gCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCg > 2:4148103/1‑150 (MQ=255) cTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCga > 2:4246147/1‑150 (MQ=255) cTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCga < 1:7793670/150‑1 (MQ=255) tttGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCgag > 1:8170674/1‑150 (MQ=255) ttGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCgaga > 1:4402314/1‑150 (MQ=255) | ATGGCGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGA > NC_002947/1210685‑1210983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |