| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,356,046 | G→C | 6.5% | intergenic (+307/‑85) | PP_1180 → / → PP_1181 | hypothetical protein/two‑component system response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,356,046 | 0 | G | C | 6.5% | 1073.5 / 45.3 | 321 | intergenic (+307/‑85) | PP_1180/PP_1181 | hypothetical protein/two‑component system response regulator |
| Reads supporting (aligned to +/- strand): ref base G (163/137); new base C (11/10); total (174/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
Only 100 of 336 total aligned reads displayed.
CCAAGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCAC > NC_002947/1355897‑1356192 | cAAGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTTGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCggg > 2:4978576/1‑150 (MQ=255) cAAGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCggg < 2:6318250/150‑1 (MQ=255) cAAGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCggg > 2:4578122/1‑150 (MQ=255) aaGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCgggg < 1:3060173/150‑1 (MQ=255) gTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGACGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTc > 2:2682387/1‑150 (MQ=255) tttGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCGCCCCGCgggcggtgc < 1:3698824/150‑7 (MQ=255) tttGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCg < 2:3818258/150‑1 (MQ=255) tGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGt > 2:1085904/1‑150 (MQ=255) gCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGtc > 2:7072124/1‑150 (MQ=255) cAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAATACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGACCGAGCGCCC‑CGCGGGCGGTGCTCGAtct < 1:8308247/150‑1 (MQ=255) tGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGcccc < 2:282100/150‑1 (MQ=255) tGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGGGCCCTGCGAGACCGAGCGCCC‑CGCGGGCGGTGCTCGAtctc > 2:8999675/1‑141 (MQ=25) gCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGccccc < 2:6834166/150‑1 (MQ=255) gCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGccccc > 2:2394115/1‑150 (MQ=255) cACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCCGGGcccccc > 1:2353991/1‑150 (MQ=255) cACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCCGGGcccccc > 1:544662/1‑150 (MQ=255) cACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGcccccc > 2:327890/1‑150 (MQ=255) cACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGcccccc > 1:4426694/1‑150 (MQ=255) aCCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCa > 1:3311651/1‑150 (MQ=255) aCCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGACCGAGCGCCC‑CGCGGGCGGTGCTCGAtctcc > 1:612581/1‑137 (MQ=38) gAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTAc < 1:5883900/150‑1 (MQ=255) gAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGCCTCGCAGGGCCCCCCATCTAc < 1:575205/150‑1 (MQ=255) cTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCaa > 2:556970/1‑149 (MQ=255) cTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCAt > 2:6908699/1‑150 (MQ=255) ttGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATa > 1:8175549/1‑150 (MQ=255) ttGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATa < 1:7850662/150‑1 (MQ=255) gCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATActct > 1:6928402/1‑150 (MQ=255) cAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACtctc < 2:1733921/150‑1 (MQ=255) aGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCa < 2:7471086/150‑1 (MQ=255) aGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCa > 1:6271900/1‑150 (MQ=255) gTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAg < 1:8327808/150‑1 (MQ=255) gTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAg < 1:701028/150‑1 (MQ=255) ttttttttGGGGGCGAAGCCTGTCACAAAAATCGGTTCAGTCGTGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGc > 1:2182173/1‑150 (MQ=255) ttttttttGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGTTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGc > 1:5187032/1‑150 (MQ=255) ttttttttGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGc > 1:1443282/1‑150 (MQ=255) ttGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCt < 1:5334039/150‑1 (MQ=255) ggccgcgAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGa < 1:258010/147‑1 (MQ=255) ggCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGac < 1:9126813/150‑1 (MQ=255) gcgcGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGaca < 1:1609705/150‑1 (MQ=255) aaGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGTTCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATc < 2:1266329/150‑1 (MQ=255) aaGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATc < 1:2394150/150‑1 (MQ=255) aGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTTTCTGATGATCTGGGGTG‑CCTGTGAGATCGAGCAACG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCGCTGACACGATcc < 1:4116315/150‑1 (MQ=255) cTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCaa < 2:3362322/150‑1 (MQ=255) tCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGaa > 2:2036421/1‑150 (MQ=255) acaAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGaaca > 2:6487947/1‑150 (MQ=255) acaAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGaaca > 2:6227072/1‑150 (MQ=255) caAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGaacaa < 2:1207952/150‑1 (MQ=255) caAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGaacaa > 1:6070425/1‑150 (MQ=255) aaaaaaCGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCCGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGaacaac > 1:8068251/1‑150 (MQ=255) aaaaaaCGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGaacaac > 2:3895231/1‑150 (MQ=255) aaaaaaCGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGaacaac > 1:7516442/1‑150 (MQ=255) aaaaaaCGGTTCAGTCGAGGGGGAGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCACATCTACATTCATACTCTCAGCTGCCCTGACACGATCACAAGaacaac > 2:5362018/1‑150 (MQ=255) aaaaCGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAAcaacaa < 1:297042/150‑1 (MQ=255) aaaCGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAg < 1:3871237/150‑1 (MQ=255) aaaCGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAg < 1:6947537/150‑1 (MQ=255) ggTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCa < 1:8830703/150‑1 (MQ=255) ttCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCAt < 2:7231866/96‑1 (MQ=255) ttCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCAt > 1:7231866/1‑96 (MQ=255) ttCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCaaa < 2:7646694/150‑1 (MQ=255) tCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCAt < 1:1101867/150‑1 (MQ=255) ggCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGaccac > 1:3988970/1‑150 (MQ=255) cGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCAccc < 1:7656711/150‑1 (MQ=255) tgggCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATa < 1:680543/149‑1 (MQ=255) gggCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATAc < 1:6894391/150‑1 (MQ=255) ggCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATAcc < 1:1240804/150‑1 (MQ=255) ggCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATAcc < 2:8493389/150‑1 (MQ=255) tCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCAt > 2:4016279/1‑150 (MQ=255) tGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATcc > 1:641214/1‑150 (MQ=255) gAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCCGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCt > 1:2509059/1‑150 (MQ=255) gAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCt > 2:7689824/1‑150 (MQ=255) gAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCt > 2:5798510/1‑150 (MQ=255) gAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCt > 2:6112850/1‑150 (MQ=255) aTCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCAtc < 1:7138320/150‑1 (MQ=255) cTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCAtcgt > 1:2054653/1‑150 (MQ=255) tGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCAtcgtc > 2:1175773/1‑150 (MQ=255) gggTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCAAGGACCACCCCATACCCCGCAACCACATCGTCGa > 1:2094051/1‑150 (MQ=255) tGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAgacgac > 2:1482116/1‑150 (MQ=255) tGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAgacgac < 1:4578122/150‑1 (MQ=255) gggAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGAcc > 2:2345583/1‑150 (MQ=255) agaTCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAgc < 2:3564090/150‑1 (MQ=255) gaTCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAgcg < 1:1847329/150‑1 (MQ=255) gtCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCGTCTACATTCATACTCTCAGCTGCCCTGCCGCGTTCCCAAGAACAACAAGGCCAAAGCCATGGACGCCCCCATACCCCGCCTCCTCAGCGGCGAGGACGCCCCgcgc > 1:4646334/2‑150 (MQ=255) accGAGCGCCC‑CGCGGGCGGTGCTCGATCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAgcgc > 1:873744/3‑150 (MQ=255) aTCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAgcgc < 1:597997/150‑1 (MQ=255) tCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGcc > 2:834479/1‑150 (MQ=255) cGAGCGCCC‑CGCGGGCGGTGCTCGATCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCt > 2:4379747/1‑150 (MQ=255) cGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCt > 2:4211857/1‑150 (MQ=255) gAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTc > 1:3929887/1‑150 (MQ=255) gAGCACCG‑CCCGCGGGGCGCTCAGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTc < 1:1002150/150‑1 (MQ=255) aGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCg > 2:4732671/1‑150 (MQ=255) gCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGc < 2:7946014/150‑1 (MQ=255) cACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGcc > 2:6024854/1‑150 (MQ=255) aCCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATAcccc < 2:8234066/114‑1 (MQ=255) cg‑cccgcGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCTAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGaa > 1:2708100/1‑150 (MQ=255) cg‑cccgcGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGaa > 2:7025490/1‑150 (MQ=255) cg‑cccgcGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGaa < 1:4978576/150‑1 (MQ=255) cccgcGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACt > 2:5440019/1‑150 (MQ=255) ccgcGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTc > 2:2542505/1‑150 (MQ=255) ccgcGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTc > 1:5181737/1‑150 (MQ=255) gggCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTc > 1:5525205/1‑136 (MQ=255) | CCAAGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAGTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTG‑CCTGGGAGATCGAGCACCG‑CCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCAC > NC_002947/1355897‑1356192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |