| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,392,921 | T→C | 12.1% | intergenic (+85/‑101) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,392,921 | 0 | T | C | 12.1% | 550.0 / 48.7 | 203 | intergenic (+85/‑101) | PP_1214/ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Reads supporting (aligned to +/- strand): ref base T (79/95); new base C (8/16); total (91/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.37e-01 | |||||||||||
Only 100 of 205 total aligned reads displayed.
CGACGTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCT > NC_002947/1392773‑1393067 | cgacgTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTAtt < 1:3858433/150‑1 (MQ=255) gacgTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTa < 2:3503163/150‑1 (MQ=255) gacgTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTGTCGCGGGGGAAACCCCGGCGACAGGTATTa > 1:4795251/1‑150 (MQ=255) gTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTTAACCCGCGCCGACAGGGAtttagc > 1:1424629/1‑146 (MQ=255) gCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGcc‑c < 1:8615511/150‑1 (MQ=255) gCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGcc‑c < 1:4010249/150‑1 (MQ=255) aaCGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑ttt < 2:9050679/150‑1 (MQ=255) aCGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTc < 1:6667090/150‑1 (MQ=255) cGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCa < 1:1377502/150‑1 (MQ=255) gTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCaa < 1:1691217/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCca‑a > 2:5208359/1‑150 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTCAACCCGCTCCTACAGGTATTACGCC‑CC‑ATTCAA‑At > 2:5220343/1‑150 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑At < 2:6131025/150‑1 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑At < 2:1527479/150‑1 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑At < 1:7618699/150‑1 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCTACAGGTATTACGCC‑CA‑TATCacag > 2:5878403/1‑147 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCAACAGGTATTAAGCC‑CC‑TTTCAA‑At > 2:3439545/1‑150 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGACCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑At < 1:997377/150‑1 (MQ=255) tATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAc < 1:7940146/136‑1 (MQ=255) tATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAc > 2:7940146/1‑136 (MQ=255) aTTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑Atgt < 2:4789209/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑Atgtg < 1:8400516/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑Atgtg < 1:8293440/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑Atgtg < 2:3223484/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGATTACGCC‑CA‑TTTCAA‑Atgtg > 2:6103797/1‑150 (MQ=255) tCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATgtgg < 2:306477/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATgtggtg < 1:5371972/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATgtggtg < 2:5975321/150‑1 (MQ=255) caTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCATTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGc < 2:8491593/149‑1 (MQ=255) aaTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGc < 1:8790341/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCa < 2:4485213/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGAGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCa < 2:5314152/150‑1 (MQ=255) ccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTAc < 1:6999786/150‑1 (MQ=255) ccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGTATTACGCC‑CA‑GTTCAA‑ATGTGGTGCAGTAc > 2:8936044/1‑150 (MQ=255) aGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCt < 1:4588784/150‑1 (MQ=255) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGt < 2:6470613/150‑1 (MQ=21) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGAGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGt < 2:8791150/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTa < 1:7542474/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGTa < 2:6357651/150‑1 (MQ=21) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGTa < 1:5464451/150‑1 (MQ=21) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGCGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGTa < 1:5295225/150‑1 (MQ=18) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAg < 1:2615634/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAg < 2:6808804/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGTAg < 2:2554448/150‑1 (MQ=18) tCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAgg < 1:6254083/150‑1 (MQ=255) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGc < 2:6441871/150‑1 (MQ=255) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGTAGGAGc < 1:2944319/150‑1 (MQ=18) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGTAGGAGc < 2:6937427/150‑1 (MQ=18) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCgg < 1:767109/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCggg < 1:7313638/150‑1 (MQ=255) gaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTCTTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCGGTAGGAGCGGGtt > 2:9023981/1‑150 (MQ=255) gaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGtt < 1:4036150/150‑1 (MQ=255) tCATGGAGAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTa < 1:3629829/150‑1 (MQ=255) cATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTAc < 2:7821861/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTTAACCCGCGCCTACCGGTATTACGCC‑CC‑ATTCAA‑AAGTGGTGGAGGACCAGGAGGAGCGGGGTTTcc > 2:211680/1‑150 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTGAAACCGCTCCTACAGGTATTACGCC‑CA‑AATGAA‑ATGTTGTGCAGTACCAGTGGGAGCGGGGTTagc > 1:6794463/1‑148 (MQ=38) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTAcc < 2:5004989/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTAcc < 2:7243873/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCGTTCGCGGGGAAAACCGCGCCAAAAGGTATTACGCC‑CC‑ATTGAA‑AAGTGGTGCCGTAACGGGTGGGGCGGGGTTagc > 1:6794609/1‑148 (MQ=255) tGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCGGTAGGAGCGGGTTTTccc > 2:4515610/1‑150 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCcgc < 2:4709773/150‑1 (MQ=255) cTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGGAAACCCCCGGCTAAAGGTGTTAGGCC‑CC‑TTTCAA‑ATGTGGTGCGGGACCGGGTGGGGGGGGGTTAGCCGCCGAAgg > 2:7709820/1‑150 (MQ=255) gCTATGGTTTTTTGGCTTTTTGTGCCAACTGTTTGCTTTTGATAGCGCCTGTGCCGGCCCTTTCGGGGGTAAACCCGCTCCTACTGTTTTTACGCC‑AA‑TTTCAA‑TTTTGGTGCAGTACCTGTAGGAGCGGGTTGACCCGCGAAAGGGCCg < 2:4795799/150‑1 (MQ=255) tAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCGGTAGGAGCGGGTGTAACCCCGAAAGGGCCGgc > 2:4483738/1‑150 (MQ=255) gTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑GTTCAA‑ATGTGGTGCAGTACCGGTAGGAGCGGGTTTACCCGCGCACGGGCCGGCGCAg > 2:3736457/1‑150 (MQ=255) gTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCGTTCGCGGGGAAACCCCCGCCGACCCGGATTACGCC‑CA‑AGTCAA‑ATGGGGTGCCGTACCGGTAGGAGCGGGGTTACCCCCGCCAGGGCCCgccccg > 1:6056075/1‑146 (MQ=255) tgCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCGAAAGGTTTTACGCC‑CA‑GTTGAA‑ATGTGGTGCAGTACCCGGAGGAGCGGGTTTAACCGCGAAAGGGCCGGCGCAGGTTGTAGAGGTGcata > 2:3702177/1‑149 (MQ=25) cAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTACTACAGGTATTAAGCC‑CC‑ATTCAA‑AAGTGGTGCAGTAACAGTAGGAGCGGGTTTAACCGCGACAGGGCCGGCGCAGTTTGTAGAGATGCAACAtt > 2:8111826/1‑150 (MQ=37) aaCTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCAACAGGTATTACGCC‑CA‑ATTCAA‑ATGTGGTGCAGTACCGGTAGGAGCGGGTTTAACCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCAAGAttt > 2:7358814/1‑150 (MQ=37) ctctGCGCTTTTTATCGCGCGTGGCCCGGCCCTTTCGGGGTAAAACCCGGTCCTAC‑CGTTTTTCCCC‑CA‑TTTAAATTTTTGGTGCATTACATTTCGTCGGGGTTTAACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCAttttt < 2:4894583/150‑1 (MQ=255) ttttATCGCGCCTGGGCGGGCCCTTTCGCGGTTAAACCCGCCCCTACCGTTATAACGCC‑CA‑TTTCAA‑ATGTGGTGCATTACCTGTTGGCGCGGTTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGc < 2:2887820/150‑1 (MQ=25) tttGATTGCGCGTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTTATTACGCC‑CA‑TTTAAA‑TTGTGGTGCTTTACCTTTAGGCGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGc < 2:2888211/150‑1 (MQ=37) aTAGCGCCTGTGCCGGCCCTTTCGCGGGGAAACCCCCCCCAACCGGTATTAACCC‑CC‑CTTCAA‑AATGGGGGCCGTACCGGGCGGAGCCGGGTTACCCGCCAAAGGGCCGGGGGAGGTTGGTTCGCTGGATCAATTTTTTGAAGGGCgttt > 2:4241734/1‑149 (MQ=255) ccTGTGCCGGCCCTTTCGCGGGTAAAACCGCACCAACAGGGATTAACCC‑CA‑TTTAAA‑AAGTGGTGGAGTACCTGTAGGAGCGGGTTTTACCGCCCAAGGGCCGGCGCCGGTTGTAGAGAAGGATCATTTTTTAGACGGGCGTTTTGAcga > 2:8121733/1‑148 (MQ=19) gccccTTCCGGGGTTAACCCCGCCCCTACCGTTA‑TACCCC‑CATTTTCAA‑TGGTGGTGCTGTACGTTTTGGCGGGGTTTTACCCGCGAACGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTa < 2:3991863/148‑1 (MQ=255) gCCGTTTCGCGGGAAACCCCGCTCCTACCGTTATTCCGCC‑CA‑TTTCAA‑TTGTGGTGCAGTACGTGTAGGCGGGGTTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAg < 2:3579649/150‑1 (MQ=255) ccTTTAGCGGGTAAAACCGCACCAAAAGGTAATAAGCC‑CA‑TTTCAA‑ATGTGGTGCAGTAACTGTAGGAGCCGGTTTAACCCCGAAAGGGCCGGCGCAGTTTGTAGAGATTCATCATTTTTTCGACGGGCGTTAAGACAATGTTTCGAGGt > 2:3786890/1‑150 (MQ=255) cgcgGTTAACCCCGCTCCTACCGGTATTCCGCC‑CA‑TTTCAA‑AGTGGGTGCAGTACCTGTAGGAGCGGTTTTCCCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGa < 2:671623/150‑1 (MQ=255) gcgGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGAc > 1:4746087/1‑150 (MQ=255) gggTAAACCCGCTCCTACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGAccc > 1:3357009/1‑150 (MQ=17) ccGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGACAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:7003516/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGACAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:3020454/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:2553293/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:7186247/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:6407426/1‑150 (MQ=255) tCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 2:577831/1‑150 (MQ=255) tCCTACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 1:6184101/1‑150 (MQ=18) tACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:5127937/1‑150 (MQ=255) tACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:437600/1‑150 (MQ=255) tACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:4506199/1‑150 (MQ=255) tACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAGCAc > 2:5203434/1‑150 (MQ=255) tACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATGCAAGGTATCGACCCCGGCTCGCGCATCAc > 1:2230271/1‑150 (MQ=255) tACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:4313744/1‑150 (MQ=21) tACAGGTACTGCACCACA‑TTTGAA‑ATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:7886107/1‑150 (MQ=21) aCAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAcc > 2:3840291/1‑150 (MQ=255) aCAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAcc > 1:7359071/1‑150 (MQ=255) aGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 2:5618964/1‑150 (MQ=255) aGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 2:1069864/1‑150 (MQ=255) gTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 1:1105/1‑150 (MQ=255) tATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTa > 2:5613398/1‑75 (MQ=255) | CGACGTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTACGCC‑CA‑TTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCT > NC_002947/1392773‑1393067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |