| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,392,923 | A→G | 12.3% | intergenic (+87/‑99) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,392,923 | 0 | A | G | 12.3% | 534.3 / 50.0 | 200 | intergenic (+87/‑99) | PP_1214/ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Reads supporting (aligned to +/- strand): ref base A (80/90); new base G (8/16); total (89/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.79e-01 | |||||||||||
Only 100 of 205 total aligned reads displayed.
GACGTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGC > NC_002947/1392774‑1393072 | gacgTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTGTCGCGGGGGAAACCCCGGCGACAGGTATTa > 1:4795251/1‑150 (MQ=255) tGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑Gcc < 1:5449564/150‑1 (MQ=255) gCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑Gcc‑c < 1:4010249/150‑1 (MQ=255) gAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CAtt < 2:4931495/150‑1 (MQ=255) aaCGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CAttt < 2:9050679/150‑1 (MQ=255) aaCGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CAttt < 1:8836462/150‑1 (MQ=255) cGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCa < 1:1377502/150‑1 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGATTAC‑GCC‑CAGTTCAAAt > 2:5220338/1‑150 (MQ=255) tATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAc > 2:7940146/1‑136 (MQ=255) tATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCCGGGAAACCCCCGCCGACAGGTAATTC‑GCC‑CAGTTGAAAtg > 1:670963/1‑150 (MQ=255) tCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATgtgg < 2:2142682/150‑1 (MQ=255) tCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATgtgg < 2:306564/150‑1 (MQ=255) tCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATgtgg < 2:5242159/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTTAAACCGCGCCGGCAGGGTTTAC‑GCC‑CCTTTCGAATgtggtg > 1:5313559/1‑150 (MQ=255) caTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCATTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGc < 2:8491593/149‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCa < 2:3713488/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCa < 2:4485229/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCa < 1:6313288/150‑1 (MQ=255) ccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGTATTAC‑GCC‑CAGTTCAAATGTGGTGCAGTAc > 2:8936044/1‑150 (MQ=255) cAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCATTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTAcc < 2:373847/150‑1 (MQ=255) aGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCt < 1:4588784/150‑1 (MQ=255) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAAATG‑GGCGTAATACCTGt < 2:6470448/150‑1 (MQ=21) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGAGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGt < 2:8791150/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 1:8638420/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAAATG‑GGCGTAATACCTGTa < 2:5112705/150‑1 (MQ=21) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAAATG‑GGCGTAATACCTGTa < 2:6612832/150‑1 (MQ=21) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:6540923/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:2615530/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 2:5933822/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 2:6808804/150‑1 (MQ=255) tCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAgg < 1:6254066/150‑1 (MQ=255) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAAATG‑GGCGTAATACCTGTAGGa < 2:3877237/150‑1 (MQ=18) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGc < 1:2944429/150‑1 (MQ=18) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGc < 2:6937427/150‑1 (MQ=18) gacgaGAACATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGCCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGc < 2:2555391/150‑1 (MQ=255) acgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCg < 2:3463282/150‑1 (MQ=18) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 1:767167/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 1:767000/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 1:1703740/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCggg < 1:3703052/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCggg < 1:6880914/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCggg < 1:725460/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCggg < 1:272662/150‑1 (MQ=255) gaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTCTTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCGGTAGGAGCGGGtt > 2:9023981/1‑150 (MQ=255) gaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGtt < 1:4036150/150‑1 (MQ=255) cATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑c < 1:7596504/150‑1 (MQ=255) cATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑c < 2:7821861/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑cc < 2:544691/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑cc < 2:7243873/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAAACCCTCCAAAAGGTATTAA‑GCC‑CAATTAAAAATTTGTGCAGTAACTGTTTGTGCGGGTTTaac > 1:6794608/1‑148 (MQ=255) ggAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCcg < 1:2528385/150‑1 (MQ=255) cTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGGAAACCCCCGGCTAAAGGTGTTAG‑GCC‑CCTTTCAAATGTGGTGCGGGACCGGGTGGGGGGGGGTTA‑GCCGCCGAAgg > 2:7709820/1‑150 (MQ=255) cGGCTATGGTGATTGGGCTTTTTGTGCCAACTCTGAGCGTTTGATAGCGCGTGTGCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTTAACTG‑GGCTTAATACCTGTAGGCGCGGGTTTA‑CCCGCGAAAGGGc < 2:4759867/150‑1 (MQ=14) ggCTATGGTGTTTTGGCATTTGGTGCCAACTCTGAGGGTTTGATAGCGCCTGTGCGGGCCCTTTCGGGGTTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGGGGGTTTA‑CCCGCGAAAGGGcc < 2:5773311/150‑1 (MQ=37) gatacggTTATTTGGCTTTTTGTGCCAACTCTGAGCTTTTGATCGCGCCTGTGCGGGCCCTTTCGCGGGTAACCCCGCTCCTACAGGTTTTAC‑GCC‑AATTTCAAATGTGGTGAAGTACCTTTAGGAGCGGTTTTA‑CCCGCGAAAGGGCCg < 2:4796485/145‑1 (MQ=25) gCTTAGGTGTTTTGGCTTTTTGTGCCAACTCTGAGCGTTTGTTAGCGCCTGTGCCGGCCCTTTCGCGGTTAAACCCGCTCCTACCGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCg < 2:4795251/150‑1 (MQ=37) tAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCAACAGGTATTAA‑GCC‑CATTTCAAATGTGGTGCAGTAACTGGAGGATCGGGGTTA‑ACCGCGAAAGGGCCCgc > 2:4484435/1‑150 (MQ=38) aTTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCAAAAGGTATTAC‑GCC‑CCATTCAAATGTGGTGCAGTACCGGTAGGAGCGGGTTTA‑CCCGCGAAAGGGGCGGCGCAGTTTGTAgaga > 2:2907118/1‑150 (MQ=37) tgCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCAACAGGTATTAA‑GCC‑CAATTCAAATGTGGTGCAGTACCCGGAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGcatc > 2:4400786/1‑150 (MQ=38) cAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTACTACAGGTATTAA‑GCC‑CCATTCAAAAGTGGTGCAGTAACAGTAGGAGCGGGTTTA‑ACCGCGACAGGGCCGGCGCAGTTTGTAGAGATGCAACAtt > 2:8111826/1‑150 (MQ=37) cAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCACCTACAGGTATTAC‑GCC‑CATTTAAAAAGTGGTGCAGTACCAGTAGGAGCCGGTTTA‑CCCCCGGAAGGGCCGGCGCAGGTTGTAGAGATGCATCCtt > 2:3690749/1‑150 (MQ=37) cAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTAGCGGGTAAAACCCCGCCAAAACGTATTAA‑GCC‑CAATTAAAAATTGGTGCCGTACCCGTGGGAGCGGGGTTA‑CCCGCGCAAGGGCCGGCGCCGTGTGTGGTGCTTCATCAtt > 2:163042/1‑150 (MQ=255) aaCTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCAACAGGTATTAC‑GCC‑CAATTCAAATGTGGTGCAGTACCGGTAGGAGCGGGTTTA‑ACCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCAAGAttt > 2:7358814/1‑150 (MQ=37) aCTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCCCTACTAAAGGTATTAA‑GCC‑CAATTAAAATGTTGTGCAGTACCAGTAGGAGCGGGTTTA‑CCCCCGCAAGGGCCCGCGCAGTTTGTATATATGCAAAAtttt > 2:4324281/1‑150 (MQ=255) tttGATCGCGCCTGTGCCGGCCCTTTCGCGGTTAAACCCGCTCCTCCCGTTTTTAC‑GCC‑CATTTAAAATGTGGTGCAGTACCTGTAGGAGCGGTTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGc < 2:2887896/150‑1 (MQ=37) tttGATAGCGCCTGTGCCGGCCCTTTCGCGGGGAAAACCCCGCCGACAGGTAATAC‑GCC‑CAATTGAAATGTGGTGGAGGAACAGTAGGAGCGGGTTTA‑CCCGCGACAGGGCCGGCGCAGGTTGTTGGGGTGCATCATTTTTTAGACgggg > 2:3421700/1‑149 (MQ=21) tttGATAGCGCCTGTGCCGGCCCGTTCGCGGGTAAAACCCCACCAACACGTAATAA‑GCC‑CAATTAAAATGTTGTGCACTACCGGTAGGAGCGGGTTTA‑CCCGCGACAGGGCCCGCGCAGGTTGTAGAGATTGAACAATTTTTCggacggc > 2:514124/1‑144 (MQ=19) aTAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCCCACCAAAACGGATTAA‑GCC‑CCAATCAAATTGGGGGCCGTAGCCGTCGGGGCGGGGTTA‑ACCCCCCAAGGGGCCGCGCCGGTTGTATAGATGCCACATTTTTTAGAAGGGCTTTa > 2:4242223/1‑150 (MQ=255) aTAGCGCCTGTGCCGGCCCTTTCGCGGGGAAAACCCCGCCAACACGTATTAC‑GCC‑CCAATGAAATGTGGTGGCGTACCGGGAGGGGCGGGGTTA‑ACCCCGAAACGGCCCGCGCGGGTGGTTGGGATGGCTCATTTTTTGGACGGGCgttt > 2:6216785/1‑149 (MQ=255) tggcgcGTGTGCGGGCCGTTGCG‑GGGTTAACCCGGCCCCGCCGGTTTTACGGCC‑CTTTTATATTGTGGTGCCTTACGTGTGGGTGGGGTTTTC‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTAt < 2:4167978/148‑1 (MQ=255) cgcCTGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCAACAGGGATTAC‑GCC‑CATTTCAAAAGTGGGGCAGTGCCGGTAGGAGCGGGTTTA‑CCCGCGCAAGGGCCGGCGCCGGTTGTAGAGCTGCATCATTTTTTCGACGGGCTTTAttaa > 2:4515849/1‑147 (MQ=25) ccTGTGCCGGCCCTTTCGCGGGTAAAACCGCACCAACAGGGATTAA‑CCC‑CATTTAAAAAGTGGTGGAGTACCTGTAGGAGCGGGTTTT‑ACCGCCCAAGGGCCGGCGCCGGTTGTAGAGAAGGATCATTTTTTAGACGGGCGTTTTGAcga > 2:8121733/1‑148 (MQ=19) tgCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGTATCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGAt < 2:6029560/150‑1 (MQ=255) gCCCTTTCGGGGTTAAACCCGCCCCTTCAGTTATTAC‑GCC‑ATTTTCAACTGTGGTTCAGTACCTGTTGGAGCGGGTTTA‑CCCGCGAATGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAg < 2:5833729/150‑1 (MQ=38) gCCCTTCGGCGGTAAACCCCGCTCCTACCGTTATTCC‑CCC‑CATTTCAACGGTGGTGCTGAACCTGTTGGCGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAg < 1:8362381/150‑1 (MQ=255) cgcgGTTAACCCCGCTCCTACCGGTATTCC‑GCC‑CATTTCAAAGTGGGTGCAGTACCTGTAGGAGCGGTTTTC‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGa < 2:671623/150‑1 (MQ=255) gcgGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGAc > 1:4746087/1‑150 (MQ=255) gcgGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTGTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGAc > 1:1493592/1‑150 (MQ=255) tAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCgg > 1:6156676/1‑150 (MQ=255) aaaCCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGc > 1:3369113/1‑150 (MQ=255) aCCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTc > 2:6106145/1‑150 (MQ=255) cccGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcg > 2:6366017/1‑150 (MQ=255) ccGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGACAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:7003516/1‑150 (MQ=255) ccGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:7186247/1‑150 (MQ=255) ccGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:3020568/1‑150 (MQ=255) ccGCTCCTACAGGTACTGC‑ACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:3534747/1‑150 (MQ=18) cTACAGGTACTGC‑ACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTAt < 2:1307246/112‑1 (MQ=11) tACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:5203473/1‑150 (MQ=255) tACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:735331/1‑150 (MQ=255) tACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:4506199/1‑150 (MQ=255) tACAGGTACTGC‑ACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:7886447/1‑150 (MQ=21) aCAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAcc > 1:7359738/1‑150 (MQ=255) aGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 2:5618554/1‑150 (MQ=255) aGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 2:1069806/1‑150 (MQ=255) aGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 1:8474856/1‑150 (MQ=255) aGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGGTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTCTCGACCCCGGCTCGCGCATCACCgg > 1:8280263/1‑150 (MQ=255) gTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 2:3818224/1‑150 (MQ=255) gTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 1:1105/1‑150 (MQ=255) tATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTa < 1:5613398/75‑1 (MQ=255) tcaC‑GCC‑CTTTACACCTGGGGTGCAGTCCCTGTAGCCG‑GGGTTAACCCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATg < 1:5208359/148‑1 (MQ=255) | GACGTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGC > NC_002947/1392774‑1393072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |