Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,414,219 T→C 7.0% S86G (AGC→GGC) ‡ PP_1236 ← glycine cleavage system transcriptional repressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,414,2190TC 7.0% 1039.1 / 43.2 343S86G (AGC→GGC) ‡PP_1236glycine cleavage system transcriptional repressor
Reads supporting (aligned to +/- strand):  ref base T (204/110);  new base C (6/18);  total (210/133)
Fisher's exact test for biased strand distribution p-value = 2.58e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.90e-01

Only 100 of 344 total aligned reads displayed.

CGCCAGGTAGGTGTCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGAGGTGACCACCGC  >  NC_002947/1414070‑1414366
                                                                                                                                                     |                                                                                                                                                   
cgcCAGGTAGGTGTCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCt                                                                                                                                                     >  1:6592816/1‑150 (MQ=255)
  ccAGGTAGGTGTCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTCGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGc                                                                                                                                                   <  1:7824414/150‑1 (MQ=255)
    aggtaggtGTCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCgg                                                                                                                                                 >  2:3460593/1‑150 (MQ=255)
      gtaggtGTCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCAGCGCGGAc                                                                                                                                               <  2:6057717/150‑1 (MQ=255)
        aggtGTCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCAGCGCGGACCa                                                                                                                                             <  1:7906312/150‑1 (MQ=255)
        aggtGTCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCAGCGCGGACCa                                                                                                                                             <  2:569151/150‑1 (MQ=255)
        aggtGTCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCAGCGCGGACCa                                                                                                                                             <  2:4664798/150‑1 (MQ=255)
            gtCGCAGGTCATGGCTTCCAGCTCGACGCGGTTGTCAAGGAAGCACTGGCACCGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCGTGGTCCGCAGCGCGGACCaggaa                                                                                                                                         <  2:1735002/150‑5 (MQ=255)
            gtCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCGTGGTCCGCAGCGCGGACCaggaa                                                                                                                                         <  2:157593/150‑5 (MQ=255)
            gtCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCAGCGCGGACCaggaa                                                                                                                                         <  1:8186663/150‑5 (MQ=255)
              cGCTGGTCTTGGCTCCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGATGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGa                                                                                                                                       <  1:5403433/150‑1 (MQ=255)
              cGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCAGCGCGGACCaggaagt                                                                                                                                       <  2:3491446/150‑7 (MQ=255)
                   gTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTc                                                                                                                                  >  2:4258951/1‑150 (MQ=255)
                     cATGGCTTCCAGCTCGACGCGGTGGTAATGGAAGAACTGGCACAGCTGGTTGATGATGTCCGGGGGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAg                                                                                                                                <  1:4487001/150‑1 (MQ=255)
                      aTGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAgg                                                                                                                               >  2:3929321/1‑150 (MQ=255)
                        ggCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGAAGGCCACAAACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGcc                                                                                                                             >  1:3665214/1‑150 (MQ=255)
                           ttCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTg                                                                                                                          >  1:6336236/1‑150 (MQ=255)
                           ttCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTg                                                                                                                          >  1:2737420/1‑150 (MQ=255)
                             ccAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGct                                                                                                                        >  2:1190296/1‑150 (MQ=255)
                                     aCGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGccc                                                                                                                >  2:3157807/1‑150 (MQ=255)
                                     aCGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGccc                                                                                                                >  2:2376351/1‑150 (MQ=255)
                                            ggtCACGGAAGACGGGGCCCCGCTCGTTGTTGTGGGCGGGGGGGTGGGCCGCGCTCAGGTCGGCCACAGAGGGCGGGGCGTGGGGGCGCACTGCCGGGGCCGGGGGGGGGCCCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTg                                                                                                         <  1:4171753/150‑1 (MQ=255)
                                              tCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGc                                                                                                       >  2:6990058/1‑150 (MQ=255)
                                               cAAGGAAGAACTGGCACAGCTCGTTGTTGATGTCGGGGCGGTTGGCAGCGCTCACGTCGGCCACATACGGAAGGGCCTGGGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCa                                                                                                      <  1:1977330/150‑1 (MQ=255)
                                                 aGGAAGAACTGGCACAGCTCGTTGATGTGGTCGGGGCGGTAGGCAGCGCTCACGTAGGCAACATACGGAAGGGCCTGGGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAgg                                                                                                    <  1:520556/150‑1 (MQ=255)
                                                 aGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGTCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAgg                                                                                                    >  1:7403275/1‑150 (MQ=255)
                                                 aGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAgg                                                                                                    <  2:5118449/150‑1 (MQ=255)
                                                  ggAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAggg                                                                                                   >  2:5636354/1‑150 (MQ=255)
                                                  ggAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAggg                                                                                                   >  2:5351027/1‑150 (MQ=255)
                                                  ggAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAggg                                                                                                   >  2:5262515/1‑150 (MQ=255)
                                                   gaagaaCTGGCACAGCTCGTTGATTTTGTCGGGGCGGTAGGCAGCGCTCACGTCGGCCACATCCGGACGGGCCGGGGGGCGCACTTCCTGGTCCGCGGTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGt                                                                                                  <  1:4898390/150‑1 (MQ=255)
                                                   caataaCTGTCACCGCGGGTTGTTGTTGTCGGGGCGGTTGGCAGCGCTCACGTCGGCCACATCCGGACGGGCCTGGGGGCGAACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGt                                                                                                  <  1:6158817/146‑1 (MQ=255)
                                                    aataaCTGCCACAGCTCTTTGATGATGTCCGGGCGGTAGGCAGCGCTAACGTAGGCAAAATACGGAAGGGCCTGCGGGCGAACTTCCTGTTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTg                                                                                                 <  1:7314953/147‑1 (MQ=255)
                                                         cTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTc                                                                                            >  2:7197202/1‑150 (MQ=255)
                                                         cTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTc                                                                                            >  2:7265377/1‑150 (MQ=255)
                                                         cTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTc                                                                                            <  2:8376719/150‑1 (MQ=255)
                                                          tGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCg                                                                                           >  1:3294484/1‑150 (MQ=255)
                                                           ggCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCga                                                                                          <  2:2588593/150‑1 (MQ=255)
                                                            gCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCgag                                                                                         >  2:8200316/1‑150 (MQ=255)
                                                            gCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCgag                                                                                         >  2:217336/1‑150 (MQ=255)
                                                                  cTCGTTGATGCTGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATCCGGAAGGGCCTGCGGGCGCACTGCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGc                                                                                   <  2:7683111/150‑1 (MQ=255)
                                                                  cTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGc                                                                                   >  2:8134635/1‑150 (MQ=255)
                                                                   tCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGcc                                                                                  >  2:8956614/1‑150 (MQ=255)
                                                                     gTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAg                                                                                >  1:3628947/1‑150 (MQ=255)
                                                                        gatgatGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACATCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGc                                                                             >  2:1038946/1‑150 (MQ=255)
                                                                           gatgTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTc                                                                          >  2:4220908/1‑150 (MQ=255)
                                                                           gatgTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAACGGCCTGCGGCCGCACTTCCTGGTCCGCGCTGCCCACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTc                                                                          >  2:8824482/1‑150 (MQ=255)
                                                                            atgTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTcc                                                                         >  1:6079778/1‑150 (MQ=255)
                                                                            atgTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTcc                                                                         >  2:3044815/1‑150 (MQ=255)
                                                                             tgTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTccc                                                                        >  2:2908326/1‑150 (MQ=255)
                                                                              gTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCa                                                                       <  1:5609569/150‑1 (MQ=255)
                                                                               tCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAg                                                                      >  2:5237504/1‑150 (MQ=255)
                                                                                 cGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCt                                                                    >  2:3642667/1‑150 (MQ=255)
                                                                                 cGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCt                                                                    >  2:7565408/1‑150 (MQ=255)
                                                                                 cGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCt                                                                    >  2:3820213/1‑150 (MQ=255)
                                                                                   ggCGGTTGGCAGCGCTCACGTAGGCCACATACGGACGGGCCTGGGGGCGCACTTCCGGGTCCGCGCGGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTgc                                                                  <  1:2291270/150‑1 (MQ=255)
                                                                                    ggggTCGGCTGCGCTCACGTAGGCCACATACGGACGGGCGTGCGGGCGAACTTCCTGGTCCGCGATGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTgcc                                                                 <  1:3949645/148‑1 (MQ=255)
                                                                                       gTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTgccgcc                                                              >  1:8292900/1‑150 (MQ=255)
                                                                                             aGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTg                                                        >  1:2878630/1‑150 (MQ=255)
                                                                                             aGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTg                                                        >  1:1627788/1‑150 (MQ=255)
                                                                                              gcgcTCACGACGGCCACATCCGGACGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTgc                                                       <  1:113821/150‑1 (MQ=255)
                                                                                                gcTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTgcag                                                     >  1:1844490/1‑150 (MQ=255)
                                                                                                gcTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTgcag                                                     >  1:5579283/1‑150 (MQ=255)
                                                                                                    aCGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGc                                                                                                                         <  2:6642997/78‑1 (MQ=255)
                                                                                                    aCGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGc                                                                                                                         >  1:6642997/1‑78 (MQ=255)
                                                                                                    aCGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCAcc                                                 >  2:908754/1‑150 (MQ=255)
                                                                                                    aCGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCAcc                                                 >  1:2898299/1‑150 (MQ=255)
                                                                                                    aCGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCAcc                                                 >  1:4583366/1‑150 (MQ=255)
                                                                                                     cGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCa                                                >  2:7859636/1‑150 (MQ=255)
                                                                                                      gTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAg                                               <  1:4737291/150‑1 (MQ=255)
                                                                                                      gTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAg                                               >  1:6401807/1‑150 (MQ=255)
                                                                                                       tAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAgg                                              <  1:6964292/150‑1 (MQ=255)
                                                                                                             acaTACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTg                                        >  1:2612511/1‑150 (MQ=255)
                                                                                                             acaTACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTg                                        <  2:4086300/150‑1 (MQ=255)
                                                                                                              caTACGGACGGGCCTGCGGGCGCAGTTCCTGGTCCGCGCGGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTgg                                       <  1:6937890/150‑1 (MQ=255)
                                                                                                               aTACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGt                                      >  2:8614114/1‑150 (MQ=255)
                                                                                                                  cGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGtctc                                   <  1:3157807/150‑1 (MQ=255)
                                                                                                                   ggAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCg                                  >  2:6810503/1‑150 (MQ=255)
                                                                                                                       gggCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGt                              >  1:440741/1‑150 (MQ=255)
                                                                                                                           cTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACAAGGGCGCTGGTCTCGCCGTggcg                          >  2:32321/1‑150 (MQ=255)
                                                                                                                            tGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTggcgg                         <  2:6388743/150‑1 (MQ=255)
                                                                                                                            tGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTggcgg                         >  1:1045337/1‑150 (MQ=255)
                                                                                                                              cGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCT                       <  1:9071494‑M1/150‑1 (MQ=255)
                                                                                                                               gggCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTC                      <  1:1592035‑M1/150‑1 (MQ=255)
                                                                                                                                ggCGCACTTCCTGGTCCGCGCTGCGGACTACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCA                     <  1:7883817‑M1/150‑1 (MQ=255)
                                                                                                                                     aCTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGgcgc                >  1:1439607/1‑150 (MQ=255)
                                                                                                                                      cTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGcgcg               <  1:7018733/150‑1 (MQ=255)
                                                                                                                                       ttCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGa              <  2:6199892/150‑1 (MQ=255)
                                                                                                                                       ttCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGa              >  2:1304543/1‑150 (MQ=255)
                                                                                                                                       ttCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGa              >  1:7513499/1‑150 (MQ=255)
                                                                                                                                         cgtGGTCCGCAGCGCGGACCAGGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGtctc                                   >  2:7803857/3‑127 (MQ=255)
                                                                                                                                         cgtGGTCCGCAGCGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGAgg            >  1:8863904/3‑150 (MQ=255)
                                                                                                                                         ccTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGtctc                                   <  2:3890861/127‑1 (MQ=255)
                                                                                                                                         ccTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGAgg            <  1:503844/150‑1 (MQ=255)
                                                                                                                                         ccTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGAgg            >  1:8494202/1‑150 (MQ=255)
                                                                                                                                           tGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGAGGTg          >  2:6566571/1‑150 (MQ=255)
                                                                                                                                           tGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGAGGTg          >  2:1656927/1‑150 (MQ=255)
                                                                                                                                              tCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGAGGTGacc       >  2:1501725/1‑150 (MQ=255)
                                                                                                                                                 gcgcTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGAGGTGaccacc    >  1:8650479/1‑150 (MQ=255)
                                                                                                                                                   gcTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGAGGTGACCACcgc  >  1:6456785/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CGCCAGGTAGGTGTCGCAGGTCATGGCTTCCAGCTCGACGCGGTGGTCAAGGAAGAACTGGCACAGCTCGTTGATGATGTCCGGGCGGTAGGCAGCGCTCACGTAGGCCACATACGGAAGGGCCTGCGGGCGCACTTCCTGGTCCGCGCTGCGGACCACGTCGAGGGTCAGGCCGTGCTTCTTGCCCAAGCCTGGCAGGGTGGATTCGAGACGTGCCAGGGCGTCCCAGCTGCCGCCCACCTGCAGCACCAGGGCGCTGGTCTCGCCGTGGCGGCTCAGGCGCGAGGTGACCACCGC  >  NC_002947/1414070‑1414366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: