BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,497,841	T→G	5.4%	M141R (ATG→AGG)	PP_1310 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,497,841	0	T	G	5.4%	618.3 / 13.6	223	M141R (ATG→AGG)	PP_1310	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (100/105); new base G (8/7); total (111/112)
Fisher's exact test for biased strand distribution p-value = 7.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 226 total aligned reads displayed.

TGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGCAGAATGCG  >  NC_002947/1497692‑1497990

  cagcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgc                                                                                                                                                     <  1:1035610/150‑1 (MQ=255)

  cagcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgc                                                                                                                                                     <  2:4846250/150‑1 (MQ=255)

  cagcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgc                                                                                                                                                     <  2:2971031/150‑1 (MQ=255)

  cagcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgc                                                                                                                                                     <  1:82303/150‑1 (MQ=255)

    gcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgcgc                                                                                                                                                   <  1:1818988/150‑1 (MQ=255)

    gcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgcgc                                                                                                                                                   <  1:1896850/150‑1 (MQ=255)

    gcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgcgc                                                                                                                                                   <  1:243718/150‑1 (MQ=255)

    gcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgcgc                                                                                                                                                   <  1:244011/150‑1 (MQ=255)

    gcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgcgc                                                                                                                                                   <  1:8949093/150‑1 (MQ=255)

     caTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgcaca                                                                                                                                                  <  2:5469552/150‑4 (MQ=255)

     caTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCCTGCGcc                                                                                                                                                  >  2:3476193/1‑150 (MQ=255)

      ttGGCTG‑GTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTg                                                                                                                                                >  2:8289176/2‑150 (MQ=255)

        ggCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGa                                                                                                                                               <  2:1426712/150‑1 (MQ=255)

        ggCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCATGCGCCTGa                                                                                                                                               >  1:8364782/1‑150 (MQ=255)

          cTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGAcc                                                                                                                                             <  2:380845/150‑1 (MQ=255)

          cTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGAcc                                                                                                                                             <  2:8976247/150‑1 (MQ=255)

           tGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCGTGCGCCTGAccg                                                                                                                                            >  1:4255651/1‑150 (MQ=255)

           tGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGAccg                                                                                                                                            >  2:6617376/1‑150 (MQ=255)

           tGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGAccg                                                                                                                                            <  1:1392387/150‑1 (MQ=255)

             cGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGAccgcc                                                                                                                                          <  1:9068194/150‑1 (MQ=255)

              gTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCAGGCGCATGAccgccg                                                                                                                                         <  2:6533545/150‑1 (MQ=255)

               tGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGa                                                                                                                                        >  1:5247630/1‑150 (MQ=255)

               tGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCAGGCGCATGAccgccgg                                                                                                                                        <  1:4758636/150‑2 (MQ=255)

                 ccAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGGTTCGGTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGTGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCAGGCGCATGAccgccgggg                                                                                                                                      <  2:8338711/150‑4 (MQ=255)

                   aGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCCTGCGCCGGAccgccgcaatc                                                                                                                                    >  2:3064580/1‑145 (MQ=255)

                    ggCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTcc                                                                                                                                   <  1:813526/150‑1 (MQ=255)

                    ggCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTcc                                                                                                                                   <  2:1479256/150‑1 (MQ=255)

                    ggCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCCCCGAAATcc                                                                                                                                   >  2:4819638/1‑150 (MQ=255)

                     gCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTccc                                                                                                                                  >  2:2742894/1‑150 (MQ=255)

                       aCCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGa                                                                                                                                <  2:1990889/150‑1 (MQ=255)

                         cccGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCCCCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCCGGCGCCTGACCGCCGACGTcccccag                                                                                                                              >  2:7705092/1‑146 (MQ=255)

                           cGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCGTGCGCCGGACCGCCGAATTCCCGATGcc                                                                                                                            >  1:6813849/1‑150 (MQ=255)

                             ggCTACCGCTGGTGCTGATGGGC‑TTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCa                                                                                                                         <  1:5980902/150‑1 (MQ=255)

                              gCTACCGCTGGTGCTGTTGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCa                                                                                                                         <  1:3837536/150‑1 (MQ=255)

                                  ccGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCCTGCGCCGGACCGCCCAAATCCCGAAGcccccccgc                                                                                                                     >  1:6303001/1‑143 (MQ=255)

                                   cGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCt                                                                                                                    <  2:4214556/150‑1 (MQ=255)

                                    gCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCAGACCGCCGAACTCCCGAGGCCGCAGCGCTg                                                                                                                   >  1:9023421/1‑150 (MQ=255)

                                     cTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGc                                                                                                                  <  1:2221849/150‑1 (MQ=255)

                                      tGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGcc                                                                                                                 <  2:7956561/150‑1 (MQ=255)

                                      tGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGGATGCGCCGGACCGCCCAAGTCACGATGCCGcagcccagcc                                                                                                                 >  1:7767400/1‑150 (MQ=255)

                                             gATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCAc                                                                                                          >  1:4390842/1‑150 (MQ=255)

                                             gATGGGCTTTTAGTTAGGTGGTTTCGATGCCACCAGCCTGGCAGGGAGCCTTGAAACTGAAGGAGACGAGATGCAGCACCTGTTCATGATCGCCCAGTCGGAAAAGCTGATGTACGACGAATTCCCGATGCCACATCCCAGACCGCacac                                                                                                          >  2:5564113/1‑150 (MQ=255)

                                               tGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCg                                                                                                        <  1:5109245/150‑1 (MQ=255)

                                                 ggCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCgtg                                                                                                      <  1:7611808/150‑1 (MQ=255)

                                                 ggCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCATGCGCCTGACCGCCCAATTCCCGATGCCGCACCGCGGCCCCCGCACCgag                                                                                                      >  1:4537061/1‑148 (MQ=255)

                                                  gCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCgtgg                                                                                                     <  2:1219371/150‑1 (MQ=255)

                                                  gCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCgtgg                                                                                                     <  2:5701798/150‑1 (MQ=255)

                                                     tttCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCCTGGTGc                                                                                                  >  1:3207251/1‑150 (MQ=255)

                                                         gttcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGCTGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGcc                                                                                              <  1:750889/150‑1 (MQ=255)

                                                          ttcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCg                                                                                             >  2:567483/1‑150 (MQ=255)

                                                          ttcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCCCCCCGGCGGTCATGCGCCTGACCGCCGAATACCCGATGCCGCAGCGCGGCCCGCGCACCGTGGTGCAGCCg                                                                                             >  2:3748855/1‑150 (MQ=255)

                                                              gtggtTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCCTGCGCCGGGCCGCCGAAGTCCCGAGGCCGCAGCCCTGCCCCCACCCCGTGGTGCAGCCGGACg                                                                                         >  1:1125135/1‑150 (MQ=255)

                                                              gtggtTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCAGACCGCCGAATTCCCGATGCCGCACCGCTGCCCGCTCACCGTGGGGCAGCCGGACg                                                                                         >  2:2444980/1‑150 (MQ=255)

                                                               tggtTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGGGGGGGTGGGGCTGTCCGCCGAATTGCCGATGCGGCAGCGCTGGCCGCTCACCGTGGTGGAGCCGGgcgc                                                                                        >  1:6482134/1‑150 (MQ=255)

                                                                  tttCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCCAGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGa                                                                                     >  2:6559719/1‑150 (MQ=255)

                                                                  tttCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGa                                                                                     <  1:4125445/150‑1 (MQ=255)

                                                                      gTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                 <  1:1139483/150‑1 (MQ=255)

                                                                      gTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                 <  1:3306856/150‑1 (MQ=255)

                                                                      gTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                 >  2:220284/1‑150 (MQ=255)

                                                                      gTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                 <  2:2008330/150‑1 (MQ=255)

                                                                      gTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                 >  1:7349813/1‑150 (MQ=255)

                                                                      gTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                 <  1:2669680/150‑1 (MQ=255)

                                                                       ttGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGACTTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAg                                                                                >  2:4892160/1‑150 (MQ=255)

                                                                         gCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCATGCGCCTGACCGCCGCATTCCCGCTGCCGCCGCGCTGCCCGCGCCCCGGGGGGCAGCCGGCCGCCGAGGAAgtc                                                                              >  2:166239/1‑150 (MQ=255)

                                                                           caccaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCt                                                                                                                                                 >  2:7782921/1‑81 (MQ=255)

                                                                           caccaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCt                                                                                                                                                 <  1:7782921/81‑1 (MQ=255)

                                                                           caccaGCCTGGCCGGGCGCCATGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTCGTGCAGCCGGACGCCGATGAActcgt                                                                            <  2:7107652/150‑1 (MQ=255)

                                                                            accaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGGGGTCATGCGCCTGACCGCCGAAATCACCAAGCCGCAGCCCAGCCCCCTCACCAAGGTGCAGCCCGCCGCCCAAGAActcggc                                                                           >  1:8506851/1‑148 (MQ=255)

                                                                             ccaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGtcgtcg                                                                          >  2:592945/1‑150 (MQ=255)

                                                                                gCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCgcgc                                                                       <  2:6953249/150‑1 (MQ=255)

                                                                                       cGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCt                                                                <  1:6556524/150‑1 (MQ=255)

                                                                                       cGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCATGCGCCTGACCGCCGAATTACCGATGCCGCAGCGCAGCCCGCGCACCGGGGTGCAGCCGGACGCCGATGAAGGCGTCGCGCCGCAGcg                                                                >  1:9127884/1‑149 (MQ=255)

                                                                                         ggCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTgg                                                              <  2:5113538/150‑1 (MQ=255)

                                                                                              cTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTAc                                                         <  2:6212364/150‑1 (MQ=255)

                                                                                              cTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCATGCGCCTGACCGCCCAATTCCCGATGCCGCAGCGCGGCCCGCTCACCCTGGGGCAGCCGGACGCCGCGGAAGTCGTCGCGCCGCAGCGGGGTTAc                                                         >  1:6393775/1‑150 (MQ=255)

                                                                                               ttGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGAACCCCGAATTACCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCCGCTGGTTTACg                                                        >  2:1860735/1‑150 (MQ=255)

                                                                                                  aaaCTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAAt                                                     <  2:5489422/150‑1 (MQ=255)

                                                                                                   aaCTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATg                                                    <  1:5481744/150‑1 (MQ=255)

                                                                                                       gCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTcc                                                <  2:8206431/150‑1 (MQ=255)

                                                                                                         aGGCGTCGAGGTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGa                                              <  2:4304847/150‑1 (MQ=255)

                                                                                                           gCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACa                                            <  2:7453326/150‑1 (MQ=255)

                                                                                                               cGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCAGACCGCCCAAATCCCGAAGCCGCAGCGCTGCCCGCTCACCGGGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCt                                        >  2:8981358/1‑150 (MQ=255)

                                                                                                                gAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAAATACCGATGCCGCAGCGCTGCCCGCTCACCCTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTg                                       >  2:6437804/1‑150 (MQ=255)

                                                                                                                 aGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGt                                      <  1:2577028/150‑1 (MQ=255)

                                                                                                                 aGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCCCCGAATTCCCGATGCCGCAGCGCTGCCCGCGCACCGGGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCGGGGTTACGAATGGTCCGACAGccagg                                      >  2:4104064/1‑147 (MQ=255)

                                                                                                                  gTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTc                                     <  1:1065528/150‑1 (MQ=255)

                                                                                                                   ttGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCAGTcg                                    >  2:2134902/1‑150 (MQ=255)

                                                                                                                    tGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTcgc                                   <  2:7404118/150‑1 (MQ=255)

                                                                                                                     gcagcaCCTGTTCATGATCGCCCCGGCGGGCATGCGCCTGACCGCCGAAGTCCCGATGCCGCAGCGCGGCCCGCTCCCCGTGGTGCAGCCGGCCGCCGCTGAAGTCGTCGCGCCGCAGCGGGGTTACGAATGGTCCGACACCCTGGcgcg                                  >  1:3200219/1‑150 (MQ=255)

                                                                                                                       agcaCCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTc                                <  2:2052258/150‑1 (MQ=255)

                                                                                                                           ccTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCa                            <  2:4154481/150‑1 (MQ=255)

                                                                                                                           ccTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCGGCCCGCTCACCGGGGTGCAGCCGGACGCCGATGAAGTCGGCGCGCCGCAGCGGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCa                            >  1:3734621/1‑150 (MQ=255)

                                                                                                                             tGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATg                          <  2:8570750/150‑1 (MQ=255)

                                                                                                                               ttCATGATCGCCACGGCCGTCATGCGCCTGAACGCAGAATTCCCGATGCCGCATCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGACGTCGTCGCGCCGCAGCTGGGTTTCGAATTGTCCGACAGCCTGTCGCGGCCCCAGGAg                        >  2:1126070/1‑150 (MQ=255)

                                                                                                                                gcATGACCGCCGGGGCGATCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAgc                       >  1:197927/2‑150 (MQ=255)

                                                                                                                                  aTGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTACCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAgctg                     >  2:3402419/1‑150 (MQ=255)

                                                                                                                                    gATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAgctgct                   >  2:4718269/1‑150 (MQ=255)

                                                                                                                                          cccGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCAAGAGCTGCTGaaact             >  1:6939016/1‑148 (MQ=255)

                                                                                                                                            cggcggTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTgg           <  2:6288264/150‑1 (MQ=255)

                                                                                                                                                ggTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGCAGa       >  1:4093973/1‑150 (MQ=255)

TGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGCAGAATGCG  >  NC_002947/1497692‑1497990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`