| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,504,077 | T→A | 5.8% | intergenic (+35/‑228) | rpsI → / → petA | 30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,504,077 | 0 | T | A | 5.8% | 838.1 / 25.3 | 257 | intergenic (+35/‑228) | rpsI/petA | 30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit |
| Reads supporting (aligned to +/- strand): ref base T (118/122); new base A (8/8); total (126/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 273 total aligned reads displayed.
CCTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACGG > NC_002947/1503928‑1504226 | ccTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCtt < 1:7394775/150‑1 (MQ=255) gcgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCAAGGAACC‑gg < 2:87690/150‑1 (MQ=255) gcgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCAAGGAACC‑gg < 1:5686170/150‑1 (MQ=255) cgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑ggg < 2:8061319/150‑1 (MQ=255) cgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑ggg < 2:6210312/150‑1 (MQ=255) cgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑ggg < 1:3798904/150‑1 (MQ=255) cgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCAAGGAACC‑ggg < 1:1440138/150‑1 (MQ=255) cgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCAAGGAACC‑ggg < 2:2303923/150‑1 (MQ=255) gCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑ttttt < 2:4107755/150‑1 (MQ=255) gCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑ttttt < 2:649780/150‑1 (MQ=255) gCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAAGACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑ttttt < 2:8228732/150‑1 (MQ=255) gtGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTGGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTa < 1:3406775/150‑1 (MQ=255) tGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAg > 2:3564447/1‑150 (MQ=255) cTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGcc > 2:1681922/1‑150 (MQ=255) tGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAATGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCt > 2:1759635/1‑150 (MQ=255) ggCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCtt < 1:8171131/150‑1 (MQ=255) ggCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCtt < 1:5729769/150‑1 (MQ=255) gCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTg > 1:6567914/1‑150 (MQ=255) cTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGa < 1:1813431/150‑1 (MQ=255) tACGTCACCCGCGACGCTCGTGAAGTTGAGCTTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTACTACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGaa < 2:745173/150‑1 (MQ=255) tACGTCACCCGCGACGCTCGTGAAGTTGAGCGTGAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGaa > 1:2202325/1‑150 (MQ=255) tACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGaa > 1:2743862/1‑150 (MQ=255) tACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGaa > 1:9090931/1‑150 (MQ=255) gTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTa > 2:1154877/1‑150 (MQ=255) tCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTaa > 2:8356882/1‑150 (MQ=255) cACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATCCCGCTTCGGCAGTCGAAAAAAGCCCGGGTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAAc < 1:4082351/150‑1 (MQ=255) cACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAAc < 1:986143/150‑1 (MQ=255) ccGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTg > 1:7185896/1‑150 (MQ=255) ccGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGACATGAACTAAACTg > 1:7185764/1‑150 (MQ=255) gcgACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTc < 1:8144393/150‑1 (MQ=255) gcgACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGAGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTc < 2:6616320/150‑1 (MQ=255) tCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGcagtc > 2:2693008/1‑150 (MQ=255) cGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGcagtca < 1:5162681/150‑1 (MQ=255) gAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTg < 1:3645031/150‑1 (MQ=255) aaGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCGTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAgggg > 2:6088043/1‑150 (MQ=255) ttGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCg > 1:8400675/1‑150 (MQ=255) gCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAATTTTGCCCGGTTGCTTGGTACC‑GGGG‑TTTTTTTTTTGCCTTGAAGTAACCTGTCAGCAGTCAGTGGGCGCTTg > 1:8164875/1‑150 (MQ=255) cGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGt > 1:5312631/1‑150 (MQ=255) gTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTc < 1:1142182/150‑1 (MQ=255) tAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCg > 2:6554500/1‑150 (MQ=255) aaGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGc > 2:7159507/1‑150 (MQ=255) aaGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGc > 1:8904937/1‑150 (MQ=255) aGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAATTGCCCGGTTGGTTGGAACC‑GGGG‑TTTTTTTTTTGGGTTGAAGTTACCTGTCAGCAGTCAGTGGGCGGTTGTCggt > 1:4901333/1‑148 (MQ=255) aGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCa < 2:8904937/150‑1 (MQ=255) aGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCa < 2:6647781/150‑1 (MQ=255) aGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAAACTGTCAGCAGTCAGTGGCCGCGTGTCGCa > 1:6249584/1‑150 (MQ=255) aaaGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATa > 2:5603830/1‑150 (MQ=255) aaaGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATa < 1:5900950/150‑1 (MQ=255) aaaGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TATTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATa < 2:6424741/150‑1 (MQ=255) gTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGAc < 2:4552941/150‑1 (MQ=255) ggTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACAAACCTGTCAGCAGTCAGTGGCCGCGTGTCGCATAGACGTa > 2:7002391/1‑150 (MQ=255) gTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAg > 2:6227768/1‑150 (MQ=255) gTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑ATTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAg < 2:5584106/150‑1 (MQ=255) cGTAAAGCGCGTAAGCGTCCTCTGTACTCCAAGCGTTATTACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCaa < 2:5842972/150‑1 (MQ=255) cGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTATGCTTGTACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCaa > 1:6143192/1‑150 (MQ=255) cGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCaa < 2:5283653/150‑1 (MQ=255) gTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAg < 2:3239568/150‑1 (MQ=255) gTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAg < 2:6725952/150‑1 (MQ=255) cGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTg < 1:4819385/150‑1 (MQ=255) gTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAATTGCCCGGTTCCTTGGAACC‑GGGCTTTTTTTTTTATGGTTGTACTAAAGTGTCAGGAGTGAGTGGTGGCTTGTCGGATAGAGGTAGATCAATAAAATCGTGGGttt > 2:4276694/1‑149 (MQ=255) cTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGGACGAACCTGTCAGCAGGCAGTGGCCGCTTGTCGCATAGACGGAGATCAAGCAAAGCGTGGGTTGTCGc > 1:7606809/1‑150 (MQ=255) aGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCt > 1:316195/1‑150 (MQ=255) ctgcccAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTg > 2:1919575/5‑150 (MQ=255) tCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAAc > 1:4769716/1‑80 (MQ=255) tCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCg > 1:5089051/1‑150 (MQ=255) ccgaaGCGGTATTAACGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCg > 2:9158315/4‑150 (MQ=255) cAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCCGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCggg > 2:7829496/1‑150 (MQ=255) cAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCggg < 1:1575226/150‑1 (MQ=255) cAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCggg < 1:325365/150‑1 (MQ=255) cAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCggg > 1:5749321/1‑150 (MQ=255) aaGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCgggg < 2:5381223/150‑1 (MQ=255) aaGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCGTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCgggg > 1:2300020/1‑150 (MQ=255) atgcttcaTACCGGGTCGGGATTCGTAAAAACCCCGGGTCCCTCGTACCGGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCgggg < 2:7621369/143‑1 (MQ=255) aGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGt < 2:5199138/150‑1 (MQ=255) tAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCa > 1:6749407/1‑150 (MQ=255) aCCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCtt > 1:7819110/1‑150 (MQ=255) cTTCGGCAGTCGAAAAAAGCCCGGGTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCa < 1:1059385/150‑1 (MQ=255) ggCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAgtgt > 2:3089368/1‑150 (MQ=255) aGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGtgtgtg < 2:1462453/150‑1 (MQ=255) tCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGa < 2:2743862/150‑1 (MQ=255) tCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGGAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGa > 2:8626381/1‑150 (MQ=255) gAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGAtt > 2:390174/1‑150 (MQ=255) aaaaaaGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTTGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCGTGTCAGTGTGTGGAttt > 1:4176734/1‑150 (MQ=255) aaaaaaGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGAttt < 2:8475033/150‑1 (MQ=255) aaaaaaGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGAttt < 2:5751989/150‑1 (MQ=255) aaaaaaGCCCGGGTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGAttt < 2:4919548/150‑1 (MQ=255) aaaaaGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGGGTGTGGATTTg > 2:804351/1‑150 (MQ=255) aaatGCCCGGTTCCTAGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGGATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCGCTTGCGGGGGTAATCAGCTTGTGAGTGTGTGGATTTGt > 2:8245717/1‑150 (MQ=255) aGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTc > 1:4389190/1‑150 (MQ=255) aGCCCGGTTCCAAGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTc > 1:598140/1‑150 (MQ=255) cccGGTTCCAAGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCtt > 2:7960235/1‑150 (MQ=255) ccGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTa > 2:261134/1‑150 (MQ=255) ccGGTTCCTTGGAACC‑GGGC‑AAATTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTa < 2:1353678/150‑1 (MQ=255) cGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTAc > 1:8731644/1‑150 (MQ=255) ttCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCAt < 2:6749407/150‑1 (MQ=255) ttGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACg > 1:2874879/1‑150 (MQ=255) ttGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACg > 1:500522/1‑150 (MQ=255) ttGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACg > 2:4740912/1‑150 (MQ=255) ttGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTAACATGACg > 1:7738943/1‑150 (MQ=255) tGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACgg < 2:7398365/150‑1 (MQ=255) | CCTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACC‑GGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACGG > NC_002947/1503928‑1504226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |