| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,508,087 | G→A | 9.9% | intergenic (+17/+45) | sspB → / ← PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,508,087 | 0 | G | A | 9.9% | 689.8 / 48.5 | 241 | intergenic (+17/+45) | sspB/PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (105/112); new base A (12/12); total (117/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 251 total aligned reads displayed.
GCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGC > NC_002947/1507938‑1508234 | gCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCg > 2:1456933/1‑150 (MQ=255) tGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCgga > 2:6490340/1‑150 (MQ=255) ggAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCggat < 2:7462601/150‑1 (MQ=255) gAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCggatg > 2:3518106/1‑150 (MQ=255) aGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCggatgg > 2:9121156/1‑150 (MQ=255) cTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGcc < 2:2196932/150‑1 (MQ=255) cTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGcc < 2:8100627/150‑1 (MQ=255) cTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGcc < 1:4098787/150‑1 (MQ=255) ttCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑t > 1:8083695/1‑150 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tt < 1:6385543/150‑1 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tt < 2:585015/150‑1 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tt < 2:8927814/150‑1 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCATCCGGATCGCC‑tt < 1:1739417/150‑1 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCATCCGGATCGCC‑tt < 2:2436901/150‑1 (MQ=255) cGATGGATGGCGACGATCTGGAAGACGATGATGGGCAGCCGGATGACGCTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑ttt < 2:6963490/150‑1 (MQ=255) cGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑ttt < 1:48441/150‑1 (MQ=255) gatggatgGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tttt > 2:2925915/1‑150 (MQ=255) gatggatgGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑‑AAAAAAGGCGATCCATCCGGATCGCC‑tt < 1:1807345/147‑1 (MQ=255) gatggatgGCGACGAGCTGCAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tttt > 2:2989358/1‑150 (MQ=255) tggatggCTACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGTTGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tttttt < 1:867965/150‑1 (MQ=255) tggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tttttt < 1:7173327/150‑1 (MQ=255) tggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tttttt < 1:1849671/150‑1 (MQ=255) ggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑ttttttt < 1:2925915/150‑2 (MQ=255) ggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttg < 1:6530230/150‑1 (MQ=255) ggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttg < 2:5128253/150‑1 (MQ=255) gatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑‑AAAAAAGGCGATCCATCCGGATCGCC‑tttttttgt < 2:6246418/150‑4 (MQ=39) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCTATCCGGATGGATCGCC‑TTTtttgttt > 1:5442495/1‑150 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttgttt < 2:2279044/150‑1 (MQ=255) gCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGTGATCCGGATGGATCGCC‑TTTTTTGTTTgg < 2:4758410/150‑1 (MQ=255) cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGc < 1:2782364/150‑1 (MQ=255) cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGc < 2:2734771/150‑1 (MQ=255) gacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑‑AAAAAAGGCGATCCATCCGGATCGcc > 2:6429190/1‑135 (MQ=255) acgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGCAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCt < 1:267623/150‑1 (MQ=255) cTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCa < 1:4553773/150‑1 (MQ=255) tGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAg < 1:6393331/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGa < 1:7704488/150‑1 (MQ=255) tgCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCa > 1:4487192/1‑150 (MQ=255) aGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATc < 2:617338/150‑1 (MQ=255) gCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGa > 2:2726500/1‑150 (MQ=255) gCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGa > 2:2726878/1‑150 (MQ=255) cGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 2:3050883/150‑1 (MQ=255) cGGAGGACGATGGCCCGCCAGACGATGGAGGTCAGCCGCCGCGTCCGTCTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGAGGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 2:3158785/150‑1 (MQ=255) ggATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAATGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATg > 1:6956792/1‑150 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGa > 1:3795580/1‑150 (MQ=255) cccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACt < 1:4203830/142‑1 (MQ=255) ccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCACTCACTGAGTCAATCGATGTACTCGAACAGCt > 1:6235971/1‑150 (MQ=255) cGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCtt > 1:7273123/1‑150 (MQ=255) gCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGATAGTGGTCAAGTAAC‑‑AAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGa < 2:723109/150‑1 (MQ=255) gCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTg < 2:5248093/150‑1 (MQ=255) ccAGACGATGGAGGGTAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGa > 2:5176906/1‑150 (MQ=255) ccAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACa > 2:5025761/1‑144 (MQ=255) ccAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACa < 1:5026098/144‑1 (MQ=255) ccAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGa < 1:6006853/150‑1 (MQ=255) aGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAGAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACg > 1:2154109/1‑150 (MQ=255) cGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtc < 2:4483698/150‑1 (MQ=255) gATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtct < 2:3908886/150‑1 (MQ=255) gATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGGCAATCGATGTACTCGAACAGCTTGACGAtct > 1:2497787/1‑150 (MQ=255) gATGGAGGGCAGCCGCCGCGTCCAACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtct > 1:3083310/1‑150 (MQ=255) tGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtctt > 2:5347562/1‑150 (MQ=255) ggAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtcttct < 1:6814538/150‑1 (MQ=255) aGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGc > 2:1228402/1‑150 (MQ=255) gggCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCa > 1:8878402/1‑150 (MQ=255) gggCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCa > 2:4245343/1‑150 (MQ=255) aGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGcc < 1:9121156/150‑1 (MQ=255) ccgccgCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGaa > 1:6598027/1‑124 (MQ=255) gccgcGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGTACGCCCGaa > 1:1005070/1‑150 (MQ=255) gccgcGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGaa < 2:7894632/150‑1 (MQ=255) tCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAccc > 2:3189854/1‑150 (MQ=255) tCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAccc > 1:759007/1‑150 (MQ=255) gACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGc > 2:1370906/1‑150 (MQ=255) gACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGc > 1:8481655/1‑150 (MQ=255) gACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGc < 1:6179856/150‑1 (MQ=255) tGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGcacc > 2:757133/1‑150 (MQ=255) gccggccAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGcaccac > 1:5823347/1‑150 (MQ=255) gccAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCa < 2:5562618/150‑1 (MQ=255) ccAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGGCGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAg > 1:929895/1‑150 (MQ=255) aaGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTg < 1:2188302/150‑1 (MQ=255) aaGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTg > 2:426609/1‑150 (MQ=255) aaGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTg < 2:600450/150‑1 (MQ=255) aGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTgg > 2:676931/1‑150 (MQ=255) gTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTgg < 2:6329660/150‑1 (MQ=255) aaGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGcttctt < 2:2367429/150‑1 (MQ=255) aaGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGcttctt > 1:6516599/1‑150 (MQ=255) aaC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACg > 1:1553050/1‑150 (MQ=255) aaacaaaaaaGGCGATCCATCCGGATCGCCTTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa < 2:3627617/132‑1 (MQ=38) aaaaaaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGt > 1:7929895/1‑150 (MQ=255) aaaaaaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGt > 2:4645083/1‑150 (MQ=255) aaaaaaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGt < 2:3397899/150‑1 (MQ=255) aaaaaGGCGATCCATCCGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGa > 2:6805357/1‑150 (MQ=255) aaaaaGGCGATCCATCCGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTAGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGa > 2:24811/1‑150 (MQ=255) aaaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAc < 2:1977907/150‑1 (MQ=255) aaaaGGCGATCCATCCGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGaa > 1:4723022/1‑103 (MQ=38) aaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAcc < 1:1537423/150‑1 (MQ=255) aGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAg > 1:8343852/1‑150 (MQ=255) aGGCGATCCATCCGGATCGCCTTTTTTTGTTTGGCCTGTCCAGTCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCa > 2:8532675/1‑150 (MQ=255) ggCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAgg > 1:3621696/1‑150 (MQ=255) ggCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAgg < 1:6490254/150‑1 (MQ=255) cgCGATCCGGATGGATCGCC‑ATTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAgg < 1:3293798/149‑1 (MQ=255) cGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAGTCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGcc < 1:1112795/150‑1 (MQ=255) tCCGGATGGATCGCC‑TTCTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcag > 1:1966406/1‑150 (MQ=255) | GCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGC > NC_002947/1507938‑1508234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |