| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,508,090 | T→C | 10.0% | intergenic (+20/+42) | sspB → / ← PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,508,090 | 0 | T | C | 10.0% | 685.6 / 47.8 | 241 | intergenic (+20/+42) | sspB/PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (105/111); new base C (12/12); total (117/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.75e-01 | |||||||||||
Only 100 of 251 total aligned reads displayed.
GGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGGTA > NC_002947/1507941‑1508239 | gAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCggatg > 2:3518106/1‑150 (MQ=255) gAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCggatg > 2:6564263/1‑150 (MQ=255) aGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCggatgg > 2:9121156/1‑150 (MQ=255) gCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGAGATCCggatgga > 2:4467055/1‑150 (MQ=255) gTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCg > 1:8077650/1‑150 (MQ=255) tCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑‑AAAAAAGGCGATCCATCCGGATCGcc < 2:1436805/150‑1 (MQ=255) cTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGcc < 1:4098787/150‑1 (MQ=255) cTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGcc < 2:2196932/150‑1 (MQ=255) cTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGcc < 2:8100627/150‑1 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tt < 1:6866236/150‑1 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tt < 2:8927814/150‑1 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tt < 1:616692/150‑1 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCATCCGGATCGCC‑tt < 1:1739417/150‑1 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCATCCGGATCGCC‑tt < 2:2436901/150‑1 (MQ=255) cGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑ttt < 1:8720111/150‑1 (MQ=255) gatggatgGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tttt > 1:7637396/1‑150 (MQ=255) gatggatgGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tttt > 2:2925915/1‑150 (MQ=255) gatggatgGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑‑AAAAAAGGCGATCCATCCGGATCGCC‑tt < 1:1807345/147‑1 (MQ=255) gatggatgGCGACGAGCTGCAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tttt > 2:2989358/1‑150 (MQ=255) tggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑tttttt < 1:1849671/150‑1 (MQ=255) ggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑ttttttt < 1:2925915/150‑2 (MQ=255) ggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttg < 1:4602293/150‑1 (MQ=255) ggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttg < 2:5128599/150‑1 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttgttt > 2:7177266/1‑150 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttgttt > 1:4501615/1‑150 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttgttt < 2:2279044/150‑1 (MQ=255) ggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttgtttg < 2:6418033/150‑1 (MQ=255) cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGc < 2:2734771/150‑1 (MQ=255) cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGc < 1:2782364/150‑1 (MQ=255) acgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGCAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCt < 1:267623/150‑1 (MQ=255) tGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAg > 2:5947866/1‑150 (MQ=255) tGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAg < 1:6393026/150‑1 (MQ=255) aCGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATc < 1:7528668/150‑1 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCAc > 1:5307333/1‑150 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCAc > 1:9149439/1‑150 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCAc > 2:7562947/1‑150 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCACCGCGTCCGACTGGCCGGCCAAGCCAGAAAGTGGTCAAGTAAC‑AAAAAAAGCCGATCCGGATGGATCGCC‑TATTTTGTTTTGCCTGGACAGGccaaaca < 2:1182245/150‑7 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGa < 1:6372440/150‑1 (MQ=255) aGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATc > 1:8224377/1‑150 (MQ=255) gCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGa > 2:2726500/1‑150 (MQ=255) gCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGa > 2:2726878/1‑150 (MQ=255) cGGATGACGATGGCCCGCCAGACGATGGAGGGCAGTCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 1:7254727/150‑1 (MQ=255) cGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 2:3050883/150‑1 (MQ=255) cGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt > 2:1331569/1‑150 (MQ=255) cGGAGGACGATGGCCCGCCAGACGATGGAGGTCAGCCGCCGCGTCCGTCTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGAGGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 2:3158785/150‑1 (MQ=255) cGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCg > 1:6519800/1‑150 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCGGCGTCGGACTGGCCGGCCAAGCGTGATAGTGGTCAAGTAAC‑AAAAATAGGCGGTCCGGATGGATCGCG‑TGTTTTGTTTGGGCTGTCGAGGCAATCTGTGAGTGAATCGATGTTGTCGa > 2:6920725/1‑150 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGa > 1:3795580/1‑150 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGa > 2:5078604/1‑150 (MQ=255) cccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACt < 1:4203830/142‑1 (MQ=255) cccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGc < 2:6200700/150‑1 (MQ=255) ccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCt > 1:6235732/1‑150 (MQ=255) ccAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACa < 1:5025761/144‑1 (MQ=255) aGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAGAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACg > 1:2154109/1‑150 (MQ=255) gACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGa > 1:7804456/1‑150 (MQ=255) gATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtct < 2:3908886/150‑1 (MQ=255) gATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGGCAATCGATGTACTCGAACAGCTTGACGAtct > 1:2497787/1‑150 (MQ=255) gATGGAGGGCAGCCGCCGCGTCCAACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtct > 1:3083310/1‑150 (MQ=255) tGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtctt > 2:522875/1‑150 (MQ=255) gggCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCa > 2:4245343/1‑150 (MQ=255) gccgcGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGTACGCCCGaa > 1:1005070/1‑150 (MQ=255) gccgcGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGaa < 2:7894632/150‑1 (MQ=255) gcgTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAaca > 2:6259809/1‑150 (MQ=255) tCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAccc > 2:3189854/1‑150 (MQ=255) cGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAATAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTg > 2:4973043/1‑150 (MQ=255) aaGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTg > 1:4779929/1‑150 (MQ=255) aaGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTg < 1:2188302/150‑1 (MQ=255) aaGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTg > 2:426609/1‑150 (MQ=255) aGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTgg > 2:678070/1‑150 (MQ=255) gCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGc > 1:9019578/1‑150 (MQ=255) ccTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGcc < 1:8459385/150‑1 (MQ=255) tGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 2:5335135/1‑150 (MQ=255) tGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtc > 2:5789774/1‑103 (MQ=255) tGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtc < 1:5789774/103‑1 (MQ=255) aaGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGcttctt < 2:2367429/150‑1 (MQ=255) aaGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGcttctt < 1:8659861/150‑1 (MQ=255) tAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGAc < 2:5555916/150‑1 (MQ=255) aaC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACg > 1:1553050/1‑150 (MQ=255) aaacaaaaaaGGCGATCCATCCGGATCGCCTTTTTTTGTTTGGCCTGTCCAGGCACTCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGAc > 2:6050669/5‑150 (MQ=38) aaacaaaaaaGGCGATCCATCCGGATCGCCTTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa < 2:3627617/132‑1 (MQ=38) aC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACgg < 1:7119065/150‑1 (MQ=255) aC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACgg > 1:673324/1‑150 (MQ=255) aaaaaaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGt < 2:3397899/150‑1 (MQ=255) aaaaaaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGt > 1:5912566/1‑150 (MQ=255) aaaaaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCACTCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTg < 1:645491/150‑1 (MQ=255) aaaaaGGCGATCCATCCGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTAGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGa > 2:24811/1‑150 (MQ=255) aaaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAc < 2:1977907/150‑1 (MQ=255) aaaaGGCGATCCATCCGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGaa < 2:4723022/103‑1 (MQ=38) aaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAcc > 2:4529016/1‑150 (MQ=255) aaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAcc < 1:1537423/150‑1 (MQ=255) aGGCGATCCATCCGGATCGCCTTTTTTTGTTTGGCCTGTCCAGTCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCa > 2:8532675/1‑150 (MQ=255) ggCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAgg > 1:3621696/1‑150 (MQ=255) ggCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAgg < 1:6490340/150‑1 (MQ=255) cgCGATCCGGATGGATCGCC‑ATTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAgg < 1:3293798/149‑1 (MQ=255) cGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAGTCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGcc < 1:1112795/150‑1 (MQ=255) tCCGGATGGATCGCC‑TTCTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcag > 1:1966406/1‑150 (MQ=255) tCCGGATGGATCGCC‑TTCTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcag > 1:6588384/1‑150 (MQ=255) ccGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcagc < 2:7273123/150‑1 (MQ=255) gatggatCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAgg < 2:7637396/150‑1 (MQ=255) gatggatCGCC‑TATTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAgg < 1:4467055/150‑1 (MQ=255) | GGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGGTA > NC_002947/1507941‑1508239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |