| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,570,480 | A→C | 8.3% | intergenic (+46/‑142) | pcaF‑I → / → pcaT | beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,570,480 | 0 | A | C | 8.3% | 397.8 / 3.4 | 147 | intergenic (+46/‑142) | pcaF‑I/pcaT | beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease |
| Reads supporting (aligned to +/- strand): ref base A (58/71); new base C (8/8); total (66/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 151 total aligned reads displayed.
GACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTC > NC_002947/1570332‑1570629 | gactgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCAc < 1:115207/150‑1 (MQ=255)gactgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCAc < 1:6029369/150‑1 (MQ=255)gactgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCAc < 1:4680467/150‑1 (MQ=255)gactgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCAGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GTTCCAc < 1:384477/150‑1 (MQ=255) tgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACCGG‑GATCCACGCa > 2:5760584/1‑150 (MQ=255) tgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCa > 2:4776594/1‑150 (MQ=255) gTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATc < 2:3601168/150‑1 (MQ=255) gTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCCCCCCCACACG‑CCTCCAccccaac > 1:8483020/1‑144 (MQ=255) tGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCAc < 1:4194493/150‑1 (MQ=255) tGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCCCTCCAACAGG‑GCTCCACGCCAacac > 1:8949817/1‑150 (MQ=255) cACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCt < 1:3696760/150‑1 (MQ=255) aCCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGGAGCCCCCGCCAACAAG‑GAACCACCCAAACAccag > 1:5506999/1‑148 (MQ=255) aCCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCtg < 1:7856142/150‑1 (MQ=255) ccAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCtgt < 2:3858889/150‑1 (MQ=255) ccAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCtgt < 2:7576667/150‑1 (MQ=255) ccAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAAACACCtgt > 2:4770109/1‑150 (MQ=255) aGCTGGAGAAGAGTGGCGGTCGCAGGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTgg > 2:5064331/1‑150 (MQ=255) aGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTgg < 1:8726574/150‑1 (MQ=255) aGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTgg < 1:5112900/150‑1 (MQ=255) cTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑a < 1:5379335/150‑1 (MQ=255) tGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑Ag < 2:669643/150‑1 (MQ=255) ggAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGc < 1:6851420/150‑1 (MQ=255) gagaAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCg > 2:3921422/1‑150 (MQ=255) gaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCggg < 1:3454721/150‑1 (MQ=255) gaagaGGGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCggg < 1:8425731/150‑1 (MQ=255) agagTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCt < 1:5943021/150‑1 (MQ=255) agTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTc < 1:8090847/150‑1 (MQ=255) tGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGTAGCCCCCTCCAACACG‑GGTCCACGCAAACACCAGTGGG‑GGCGGGCGTccc > 1:5813418/1‑150 (MQ=255) tGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGTAGCCCCCGCCAAAAGG‑GGTCCACCCCAACACCAGTGGG‑GGCGGGCTTccc > 1:4633501/1‑150 (MQ=255) tGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTccc < 1:4829053/150‑1 (MQ=255) gCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GCTCCCCGCAATCACCGGTGGG‑AGCGGGCGTCCCcg > 2:516365/1‑150 (MQ=255) gCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCcg < 1:5855122/150‑1 (MQ=255) gCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCGGTGGG‑AGCGGGCGTCCCcg > 2:8449586/1‑150 (MQ=255) tCGCCAGGCCCTTGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGGAGCCCCCACCAACACG‑GATCCCCCCCAAAAACAGTGGG‑GGCGGGCGTCCCCCCGac > 1:7987599/1‑149 (MQ=255) tCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCACTCCCACAGGTGATTGCGTGGATC‑CCTGTTGG‑AGCGGGCTTCCCCGCGaa < 2:3268125/150‑1 (MQ=18) gCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGGAGCCCCCCCCAAAACG‑GCTCCACCCCAACACCCGGGGG‑TGCGGGCTTGCCcccgcaca > 1:3094754/1‑146 (MQ=255) gCAAGGGCCTGGCGACCATGTGTGTGGGGGTCGGCCAAGGTCTGGCGTTGGCCATCGCGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GAGCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAaga < 2:3428330/150‑1 (MQ=255) gggCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTATGGGGGGAGAACGCTACAAAAGT‑GGTCAACGCAAAAAACTGTTGG‑AGCGGGCTTACCCGCCAAGAGGcc > 2:802440/1‑150 (MQ=255) gCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCCCGCCAAAAGG‑GATCCACCCAATCACCAGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCctc > 2:1002430/1‑150 (MQ=255) gCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCCCACCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCctc > 2:1002416/1‑150 (MQ=255) ccTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGCAGCCCGCTCCAAAAGG‑GATCCCCGCAATCACCGGTGGG‑CGCGGGCGTCCCCGCGAAGAGGccgcg > 1:7354327/1‑147 (MQ=255) cTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGCAGCCCCCGCCAAAACG‑GCTACCCGCCAACACCGGTGGG‑GGCGGGCGTCCCCGCGCAGAGGccgcgc > 1:3563563/1‑146 (MQ=255) gACCATGTGTGTGGGTGTCGGCCACGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCtgtg < 2:6093088/150‑1 (MQ=255) cccttgtgtgtgGGTGTCGGCCACGGTGTGGCGTTGGCCATGGAGGGGGTTTGACCTGTACGGGCCTCTTCGCGGGGATGCCCGCTCCAACCGG‑GATCCACGCAAGCACCTGTGGG‑AGGGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga < 2:144664/146‑1 (MQ=255) aCCATGTGTGTGGGTGTCGGCCATGGTCTGGCGTGGGCCTTGGAGCGGTTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGGTCCAACAGG‑TATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga < 1:6771194/150‑1 (MQ=39) aCCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCAATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga < 2:1309175/150‑1 (MQ=255) aCCATGTGTGGGGGTGTCGGCCACGGTCTGGCGTGGGCCATCGTGCGGTTTTGACCTGTCCCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCCCGCAATCACCGGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga < 2:1309180/150‑1 (MQ=38) cATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTgaga < 2:8381222/150‑1 (MQ=255) cATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATACACGCAAACACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTgaga > 2:5057773/1‑150 (MQ=255) gtgGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGGGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAgg < 2:4904405/150‑1 (MQ=255) gtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGACGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCAtt < 2:6994988/150‑1 (MQ=255) gtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCAtt > 2:7359846/1‑150 (MQ=255) cGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGc < 2:5359290/150‑1 (MQ=255) cTGGCGTTGGCCATCGAGCGGTTTTGACCTGTACCGGCCTCTCCGCGGGTACGCCCGCTCCAACAGG‑GACCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATa < 1:6043256/150‑1 (MQ=255) tGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCAAGCAATCACCAGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCAATTCCAGCCCGATAg > 2:8549633/1‑150 (MQ=255) gTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGGAGCCCGCGCCAACCGG‑GCTCCCCCCCATCGCCCGGGGG‑AGCGGGGGTGCCCGCGCAGAGGCCTCGCCAGGGGGGCATAAGGCCCCATGCCCGCCCGCGAGCggg > 1:7371941/1‑149 (MQ=255) gTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGCAGCCCGCGCCAACACG‑GCACCACGCCAGCACCGGTGGG‑AGCGGGCGTCCCCGCGCACAGGCCGCGCCGGGGACACAAAACGCCCAGTGCCCCCCCGATAGCCGa > 2:7167143/1‑150 (MQ=255) gggCCATCGGGGGGTTTTGACTTGTCCCGGCCTGTTGGGGGGGATGCCCGCTCCAACTGG‑GACCCACCCAATCACCTGTGGG‑TGGGGGCTCCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAAc < 1:8786605/149‑1 (MQ=255) gCCATCGAGCGGGTTTGACTTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGa < 2:7250229/150‑1 (MQ=255) cATCGAGCGGGTTTGACCTTTCCCGGCCTCTTCGGGGGGAAGCCCGCTCCAACCGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt < 2:5540171/150‑1 (MQ=255) cATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt < 2:6773816/150‑1 (MQ=255) tCGCGCGGGTTTTCCCTGTCCCGGCCTCTGCGCGGGGAAGCCCGCTCACACAGG‑GATCCACGAAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgt < 1:676812/150‑1 (MQ=38) tCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCCCCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgt < 1:702802/150‑1 (MQ=255) cGAGCGGGTTTGACCTTTACCGTCCTATTCGCGGGGATGCCCGATCCAACTGG‑GTTCCACGCATTCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgtg < 2:1627796/150‑1 (MQ=255) gcgggtgTTTCACGTGTCCGGGCCTCTTGGGGGGGACCCCCGCACAAACTGG‑TATCCACCAAACCCCGTGTGGG‑CGGGGGCTACCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgtgt < 1:6406899/144‑1 (MQ=255) aGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGTAGCCCCCTCCAACAGG‑GATCCACGCAATCACCGGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCAGTGAGACATAAGGCCCCTTTCCAGCCCGATAGCGGAACCAGTGTGtt > 1:6864834/1‑150 (MQ=255) aGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCGCCAACAGG‑GCTCCACGCAATCACCGGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCGGTGTGACATAATGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGtt > 1:6864931/1‑150 (MQ=255) ttttGCCGTGTCCCGGCTTCTTCGGGGGGACGCCCGCCCAAACCGG‑GATCCACGAAACCCCCTGTGGG‑CGGGGGGTCCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAg < 1:1002416/149‑1 (MQ=255) ttttGACGTGTCCCGGCCTCTTGGGGGGCACCCCCGCACAAACTGG‑GAACC‑CCCAACCCCCGGGGGGTCGGGGCCTCCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAg < 1:4167144/149‑1 (MQ=255) gTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GAAACACGCAATCAACGGTGGG‑CGCGGGCTTCCCCGCGAAGAGGCCGCTCCAGTGAGACCAAAGGCCCATTTCCCGCCCGATAGAGGTACGAGTGTGTTACTAg > 1:5204364/1‑150 (MQ=255) gTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACACG‑GAAACACGCAATCACCAGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCAGTGAGACATAAGGCCCAAAGCCAGCCCCCTAGCGGAACGAGTGTGGTAATAg > 1:5204349/1‑150 (MQ=255) tGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTa < 2:6352432/150‑1 (MQ=255) tGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCt < 2:4326668/150‑1 (MQ=255) ccGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GAGCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGaa < 2:6397730/150‑1 (MQ=255) tctTCGCGGGGAAGCCCGCTCCCACAGGTGATTGCGTGGATC‑CCGGTTGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCt > 2:8080367/1‑150 (MQ=18) tctTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATAACCAGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCACTCCAGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCt > 2:4041224/1‑150 (MQ=255) gCCCGCTCCAACCGG‑GATCCCCGCAATCCCCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAgg < 2:3203755/150‑1 (MQ=255) gCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAgg < 2:9132506/150‑1 (MQ=255) cccGCTCCAACAGG‑GATCCCCGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGa < 2:3015777/150‑1 (MQ=255) cccGCTCCAACACG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGa < 2:4414389/150‑1 (MQ=255) ccGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAg > 2:4843593/1‑150 (MQ=255) cGCTCCCACAGG‑GATCCACGCAATCACCTGGGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGt > 2:7770747/1‑150 (MQ=255) cGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCCTTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGt > 2:6761456/1‑150 (MQ=255) cGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGt > 1:5347958/1‑150 (MQ=255) gCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTa > 2:2514872/1‑150 (MQ=255) tCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTaaa < 2:7314231/150‑1 (MQ=255) tCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTaaa > 1:9011538/1‑150 (MQ=255) tCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTaaa > 1:9011779/1‑150 (MQ=255) tCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTaaa < 2:2696488/150‑1 (MQ=255) tCCAACAGG‑GATCCACGCAAACAACTGTCGG‑AGCGGGATTCACCGCGAATAGGACTCTCCTGTGAGAAATAAGGCCCATTGCAATCCCGATATCGGAACGAGTGTGTTACTATTTATGTCTAGAACTACCTAGGACCCTCCAGGAGTaaa > 2:4604644/1‑150 (MQ=255) ccAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAc > 1:3110540/1‑150 (MQ=255) aaCAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAccc < 2:4633501/150‑1 (MQ=255) aGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAg < 2:5623640/137‑1 (MQ=255) aGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAg > 1:5623640/1‑137 (MQ=255) aTCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGa < 2:7987599/150‑1 (MQ=255) tCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGAGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGAc > 1:6130703/1‑150 (MQ=255) cACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCt < 2:592852/150‑1 (MQ=255) aCGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgt < 2:5186313/91‑1 (MQ=255) aCGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTc > 2:5765179/1‑150 (MQ=255) aCGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTc > 1:6384033/1‑150 (MQ=255) | GACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGG‑GATCCACGCAATCACCTGTGGG‑AGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTC > NC_002947/1570332‑1570629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |