BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,592,647	A→C	13.2%	D67A (GAC→GCC)	PP_1397 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,592,647	0	A	C	13.2%	229.4 / 4.1	104	D67A (GAC→GCC)	PP_1397	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (72/12); new base C (5/11); total (79/25)
Fisher's exact test for biased strand distribution p-value = 2.13e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 126 total aligned reads displayed.

CACTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGATCGGCTC  >  NC_002947/1592498‑1592795

cACTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcga                                                                                                                                                      <  2:4944725/150‑1 (MQ=255)

 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCCTGGGCGGCGCGCCGCGCTTTCACCAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgac                                                                                                                                                     >  2:7874047/1‑150 (MQ=255)

 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgac                                                                                                                                                     <  1:1260675/150‑1 (MQ=255)

 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgac                                                                                                                                                     >  1:1748973/1‑150 (MQ=255)

 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgac                                                                                                                                                     >  1:2926405/1‑150 (MQ=255)

 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgac                                                                                                                                                     <  1:2589047/150‑1 (MQ=255)

   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgacga                                                                                                                                                   <  1:2714052/150‑1 (MQ=255)

   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgacga                                                                                                                                                   <  1:832813/150‑1 (MQ=255)

   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgacga                                                                                                                                                   >  1:8532909/1‑150 (MQ=255)

   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgacga                                                                                                                                                   >  2:2856657/1‑150 (MQ=255)

   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgacga                                                                                                                                                   >  2:6973241/1‑150 (MQ=255)

   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgacga                                                                                                                                                   >  2:8983281/1‑150 (MQ=255)

   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgacga                                                                                                                                                   <  1:1776947/150‑1 (MQ=255)

   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgacga                                                                                                                                                   >  1:1691617/1‑150 (MQ=255)

     aTTTCGAAGCGGTATCGGCGATGGTGCCGGTGGGAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAgg                                                                                                                                                 >  1:7364993/1‑150 (MQ=255)

     aTTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCCTGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGGCGAgg                                                                                                                                                 >  1:7866486/1‑150 (MQ=255)

     aTTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGCgg                                                                                                                                                 >  2:5581965/1‑150 (MQ=255)

     aTTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAgg                                                                                                                                                 >  1:7212179/1‑150 (MQ=255)

      tttCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAggc                                                                                                                                                >  2:7519670/1‑150 (MQ=255)

      tttCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCCCCGACGAggc                                                                                                                                                >  1:3742067/1‑150 (MQ=255)

       ttCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCcgaactgttc                                                                                                                                               <  2:5096461/150‑8 (MQ=255)

       ttCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAggcg                                                                                                                                               >  2:7652039/1‑150 (MQ=255)

       ttCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAggcg                                                                                                                                               <  1:127710/150‑1 (MQ=255)

        tCGAATCGTTATCGGAGATGGTGCAGTTGGAAGGTGGCGGATATCACGCGTACATCGCGGTCAAAGCCTTGGTCATGGGAGGCTAGCAGAGATTTCACAAGGTTCTCGACTGGCAG‑GTGTTCA‑AGGGCGCCGTGTACGCCTACGAggcgg                                                                                                                                              <  2:39400/150‑1 (MQ=255)

        tCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAggcgg                                                                                                                                              <  2:4606459/150‑1 (MQ=255)

         cGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAggcggc                                                                                                                                             <  1:251980/150‑1 (MQ=255)

         cGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTCGCGGCGATCACGCGGCCAACGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑CGGGCGCCGTGGCCGCCGACGAggcggc                                                                                                                                             <  2:1220071/150‑1 (MQ=255)

           aaGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCa                                                                                                                                           <  1:1308622/150‑1 (MQ=255)

                 tATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCCCCGACGAGGCGGCCCcccccg                                                                                                                                     >  1:4929009/1‑150 (MQ=255)

                  aTCGGCGATGGTGCCGGTGGAAGGTGCCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTGCACAAGGTTCACGACGGGCAG‑GTGTACA‑AGGGCGCCGTGGCCCCCGACCAGGCGGccccccccca                                                                                                                                    >  1:3276379/1‑148 (MQ=255)

                   tCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGGCGCCGACGAGGCGGCCACCGCCGAg                                                                                                                                   >  2:915171/1‑150 (MQ=255)

                   tCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAg                                                                                                                                   >  1:2966007/1‑150 (MQ=255)

                     ggCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGGGGCGGCCACCGCCGAGCt                                                                                                                                 >  1:2448246/1‑150 (MQ=255)

                     ggCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCt                                                                                                                                 >  2:2290107/1‑150 (MQ=255)

                     ggCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCt                                                                                                                                 >  2:6115991/1‑150 (MQ=255)

                     ggCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCCACGAGGCGGcccccccccacca                                                                                                                                 >  1:2616799/1‑145 (MQ=255)

                     ggCGATGGCGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCt                                                                                                                                 >  1:8920969/1‑150 (MQ=255)

                     ggCGATGGCGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCCAGCt                                                                                                                                 >  1:3942983/1‑150 (MQ=255)

                      gCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTg                                                                                                                                >  1:1257967/1‑150 (MQ=255)

                      gCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTg                                                                                                                                >  2:2934512/1‑150 (MQ=255)

                      gCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTg                                                                                                                                >  2:7397560/1‑150 (MQ=255)

                         aTGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCaa                                                                                                                             >  1:4415650/1‑150 (MQ=255)

                         aTGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCaa                                                                                                                             >  1:9018509/1‑150 (MQ=255)

                           ggTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACg                                                                                                                           >  2:1504945/1‑150 (MQ=255)

                            gTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGc                                                                                                                          >  2:4429772/1‑150 (MQ=255)

                             tGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGcc                                                                                                                         >  2:7865628/1‑150 (MQ=255)

                              gCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCCCCCACGAGGCGGCCACCGCCGAGCGGCAAcccca                                                                                                                        >  1:7892688/1‑149 (MQ=255)

                                      aaGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCCTGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGCCGCGGCGGCCCCCCCCCAGCAGCAACCCCAGCCGGGCg                                                                                                                >  1:1786989/1‑150 (MQ=255)

                                         gTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGGCGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCa                                                                                                             >  2:135622/1‑150 (MQ=255)

                                            gcggcTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCg                                                                                                          >  1:8205001/1‑150 (MQ=255)

                                              ggcTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGaa                                                                                                        >  1:9098930/1‑150 (MQ=255)

                                                 tATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCCCCGCCGAGGCGGCCCCCGCCGAGCTGCCACCCCGGCACGGCGGCAGCGCagag                                                                                                     >  1:983196/1‑150 (MQ=255)

                                                     aCGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTg                                                                                                 >  1:2905152/1‑150 (MQ=255)

                                                     aCGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTg                                                                                                 >  2:6021161/1‑150 (MQ=255)

                                                     aCGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCCAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTg                                                                                                 >  1:2905159/1‑150 (MQ=255)

                                                     aCGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCCCCGCGGCGGCCCCCCCCGCGCGGCAACCCCAGCAGGGCGGCAGAGaacggaaga                                                                                                 >  1:239361/1‑143 (MQ=255)

                                                       gcgGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAg                                                                                               >  2:6149430/1‑150 (MQ=255)

                                                              tCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGCCCACGCGGCCACCCCCGAGCTGCAACGCCTGCCGGGCGTAACCGAAGAGGGTGAGctggtct                                                                                        >  1:6214794/1‑150 (MQ=255)

                                                                    tCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACCAGGCGGCCACCCCCGAGCTGCAACGCCAGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGAt                                                                                  >  1:3933988/1‑150 (MQ=255)

                                                                      aaaGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCa                                                                                >  2:9105156/1‑150 (MQ=255)

                                                                      aaaGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCa                                                                                >  2:1118686/1‑150 (MQ=255)

                                                                      aaaGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCCCCGACGAGGCGGCCCCCCCCCAGCTGCAACCCCAGCAGGGCGTCCGCGGAGAGGGTGAGCGGGTGTGGTGTTCa                                                                                >  1:432721/1‑150 (MQ=255)

                                                                       aaGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAg                                                                               >  2:3742839/1‑150 (MQ=255)

                                                                          ccTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCCCCCAGCTGCAACGCCAGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGTTCAGGcc                                                                            >  1:6926504/1‑150 (MQ=255)

                                                                              gggCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCcggcg                                                                        >  2:475268/1‑150 (MQ=255)

                                                                                  aTGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCg                                                                    >  2:8750220/1‑150 (MQ=255)

                                                                                   gggggggCGCGCGGCGCTTCCACTTGGTTCTGGAGGGGCTG‑GTGTACA‑TGGGCGCGGTGCCCGCGGCGGCGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCgg                                                                   <  2:7391570/149‑1 (MQ=255)

                                                                                   gggggggCGCCCGGCGCTTACACTCGTTCCTCGCGGGGCTG‑GT‑TTCACGGGGCGCGGGGGCCGCCGACGCGGGGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCgg                                                                   <  2:7391489/149‑1 (MQ=255)

                                                                                         gcgcgcCGCGATTTCACCTTGTCCCCGCGGGGCTG‑GTGTCCA‑GGGGCGCGGGGCCCGCCCCCGCGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATc                                                             <  2:3706366/150‑1 (MQ=255)

                                                                                         gcgcccCGCGCTTCCCCCTGGTCCGCGCCGGCCCG‑GTTCTCC‑CGGGCGCGGGGGCCCCCGCCGTGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATc                                                             <  2:2129284/150‑1 (MQ=255)

                                                                                             gccgcgcTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGGGAAGTGGGTGATCTGGTGTGGTGATGAGGCCGGCGGCCGGGCCATCTTGa                                                         >  2:4836692/1‑150 (MQ=255)

                                                                                              cggggcTTTCACATGGTGGCCGCGGGGCCG‑GTGTTCA‑TGGGCGCGGGGGCGGCCGCGGGGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGaa                                                        <  2:8331699/146‑1 (MQ=255)

                                                                                              ccgcgcTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCCCCGCCGAGCTGCCACGCCTGCAGGGCGTCAGCGAAGAGGGGGAGCGGGTCGGGGGCTCCGGCCGGCGGCCGGGCCCGCTTGaa                                                        >  2:7101288/1‑150 (MQ=255)

                                                                                              ccgcgcTTCCACCTGGGTCGCGCGGGGCTG‑GTGTCCC‑GGGGGGCGGGGGCCGCCGCCGCGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGaa                                                        <  2:7364993/150‑1 (MQ=255)

                                                                                               ggcgcTTACCCACGGTTCGCGCGGGGCTG‑GTGTCCC‑GGGGCGCGGGGGCCGCCGACGGGGCGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAAc                                                       <  2:2989500/149‑1 (MQ=255)

                                                                                                 cgatttCACATGTTTCCCGCCGGGCTG‑GTTTTCA‑CGGGCGCGGGGCCCGCCCACGCGGGGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAg                                                     <  2:2995638/147‑1 (MQ=255)

                                                                                                  gcTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCCACGAGGCGGCCACCCCCGAGCGGCAAACCCAGCAGGGGGTCAGCCAAGAGGGTGTGCGGGGCTGGTGTTCAGGCCGGCGGCCGGGCCCTCTTTAAAAgg                                                    >  1:6956111/1‑150 (MQ=255)

                                                                                                      tCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCCACCAGGCGGCCCCCCCCCCGCAGCAACGCCAGCAGGGCGGCAGCGCAGATGGTGAGCTGGTCTGGGGGTCAGGCCGGCGGCCGGGCCAACTTTTACAGGTTGc                                                >  1:3998588/1‑150 (MQ=255)

                                                                                                       acactggTTTTCGGCGGGCCGTGTTTTCC‑GGGGGGCGGTGGCCCCCCCGGGGGCGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGc                                                <  1:6794835/145‑1 (MQ=255)

                                                                                                        acaAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCCACCAGGGGGCCCCCCCCGCGCTGCAACCCCGGCCGGGCGGCCCCCCAGGGGGTGTGCGGGTCTGGTGTTCAGGCCGGCGGCCGGGGCCTCGTGAACAGGTTTccc                                              >  1:8445658/1‑150 (MQ=255)

                                                                                                        acaAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCAGCCGAAGAGGCGGCCAACCCCCAGCTTCAAAGCCTGCAGGGCGTCAGCGAAGAGTGTGAGCTTGTCTTGTGATAACGCCGTCGGCCGGGCCATAATGAAAAGGTTTccc                                              >  2:5502215/1‑150 (MQ=255)

                                                                                                         caAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCCCCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACACGTTGCCCa                                             >  2:515289/1‑150 (MQ=255)

                                                                                                         caAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCa                                             >  2:515804/1‑150 (MQ=255)

                                                                                                         caAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCAGCAGGGCGTCAGCGAAGAGGGTGAGCTGGGCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTTCCCa                                             >  2:7712049/1‑150 (MQ=255)

                                                                                                                  cGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAaat                                    >  2:6104957/1‑150 (MQ=255)

                                                                                                                      gggCTG‑GTTTTCC‑GGGGCGCGGGGGCGGCGGCGGCGGGGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATc                                <  2:2926405/150‑1 (MQ=255)

                                                                                                                                ttCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTTCAAAGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTTATAAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATATTCCGGGcc                       >  2:4135485/1‑150 (MQ=255)

                                                                                                                                      gggCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCAcccc                  >  2:7496335/1‑150 (MQ=255)

                                                                                                                                       ggCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAAAGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCAACTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCAccccc                 >  2:6710122/1‑150 (MQ=255)

                                                                                                                                           ccGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGc             >  1:2517691/1‑150 (MQ=255)

                                                                                                                                            gggggCCGCCGCGGGGGGGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCa            <  2:3021028/147‑1 (MQ=255)

                                                                                                                                            gggggCCGCCGAGGCGGGGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCa            <  1:8336869/147‑1 (MQ=255)

                                                                                                                                            gggggCCCCCGCCGCGGCGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCa            <  1:6813588/147‑1 (MQ=255)

                                                                                                                                              gggCCGCCGCCGCGCCCCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAgg          <  1:2601586/149‑1 (MQ=255)

                                                                                                                                                  cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg      >  1:32909/1‑150 (MQ=255)

                                                                                                                                                  cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg      >  2:7145639/1‑150 (MQ=255)

                                                                                                                                                  cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg      >  1:33322/1‑150 (MQ=255)

                                                                                                                                                  cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg      >  1:7846066/1‑150 (MQ=255)

                                                                                                                                                  cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg      >  1:6695844/1‑150 (MQ=255)

                                                                                                                                                      gacgaGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcggctc  >  1:4155807/1‑150 (MQ=255)

CACTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAG‑GTGTTCA‑AGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGATCGGCTC  >  NC_002947/1592498‑1592795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`