New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1 =	0 (0.000)	12 (0.710)	9/264	0.5	100%	intergenic (–/+146)	–/parB	–/chromosome‑partitioning protein
	?	NC_002947	= 6183851	0 (0.000)					intergenic (‑3/–)	atpI/–	ATP synthase protein I/–

CACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/84‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCG  <  NC_002947/6183851‑6183729                                                                                                                                                                                                                 CACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTT                                                                         <  2:421974/136‑1       TATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGG                                                                   >  1:252957/1‑136            TCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTG                                                              >  1:196126/1‑136                 GCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGC                                                         >  1:86426/1‑136                 GCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGC                                                         >  2:304244/1‑136                   GCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTC                                                       >  1:336995/1‑136                   GCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGC                                                         <  1:272275/134‑1                   GCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGC                                                         >  2:272275/1‑134                   GCATTTTGACGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTC                                                       >  1:225943/1‑136                                                        ACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTG                  <  2:86426/136‑1                                                           TGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCA               >  2:308690/1‑136                                                                        CCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCG  <  1:308690/136‑1                                                                                                                                                                                                                 CACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/84‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCG  <  NC_002947/6183851‑6183729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.