New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1 = | 0 (0.000) | 3 (0.310) | 3/244 | NT | 100% | intergenic (–/+146) | –/parB | –/chromosome‑partitioning protein |
? | NC_002947 | = 6183851 | 0 (0.000) | intergenic (‑3/–) | atpI/– | ATP synthase protein I/– |
TATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/78‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCT < NC_002947/6183851‑6183763 TATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGG > 2:19861/1‑136 GCGCATTTTGTCGACACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGC > 1:87351/1‑136 aATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAACCCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCGGCT < 2:269218/135‑1 TATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/78‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCT < NC_002947/6183851‑6183763 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |