Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	2226003	2226022	20	2 [1]	[0] 2	PP_1962	site‑specific recombinase

CCTTAAACTTTCAGGAATTAGCTTGTTGAGCGATAAGGAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATTAAGCATCGGATTTGTT  >  NC_002947/2226023‑2226158 |                                                                                                                                        ccTTAAACTTTCAGGAATTAGCTTGTTGAGCGATAAGGAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATTAAGCATCGGATTTGtt  <  1:28503/136‑1 (MQ=255) ccTTAAACTTTCAGGAATTAGCTTGTTGAGCGATAAGGAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATTAAGCATCGGATTTGtt  <  1:93639/136‑1 (MQ=255) |                                                                                                                                        CCTTAAACTTTCAGGAATTAGCTTGTTGAGCGATAAGGAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATTAAGCATCGGATTTGTT  >  NC_002947/2226023‑2226158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑