New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3368518 =	67 (0.370)	91 (0.500)	41/264	0.9	70.0%	intergenic (+219/‑142)	PP_2962/PP_2964	alcohol dehydrogenase/transposase
	?	NC_002947	4459337 =	11 (0.060)					coding (9/696 nt)	pcaI	3‑oxoadipate CoA‑transferase subunit A

GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3368648‑3368518 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCGACC  >  NC_002947/4459337‑4459470                                                                                                                                                                                                                                                                            GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAA                                                                                                                                   >  2:2887936/1‑136 GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAA                                                                                                                                   >  2:3011115/1‑136 GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAA                                                                                                                                   >  2:1655013/1‑136  GCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAAC                                                                                                                                  <  1:986487/136‑1  GCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAAC                                                                                                                                  <  1:4008255/136‑1  GCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAAC                                                                                                                                  <  1:3989787/136‑1    AAAAGCATCAGCATAGACTGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACACAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACat                                                                                                                                >  1:4180200/1‑134    AAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGT                                                                                                                                >  2:4008929/1‑136              GCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCA                                                                                                                       >  2:4015732/1‑136              GCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCAT                                                                                                                      >  2:886950/1‑136                 TAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGC                                                                                                                   <  2:3295767/136‑1                   GACGGCTAGCCAGACGGTTGATGACCAGCAAGCCACTGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGTCATAACCCCTAAAACGTACGAGTCCATCGCCA                                                                                                                 <  1:4054733/136‑1                   GACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCA                                                                                                                 <  2:1228973/136‑1                   GACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCA                                                                                                                 <  1:244946/136‑1                   GACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCA                                                                                                                 <  2:461931/136‑1                   GACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCACATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCA                                                                                                                 <  1:4397809/136‑1                     CGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGC                                                                                                               <  2:2368576/136‑1                         TAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGG                                                                                                           >  1:3224443/1‑136                          AGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGT                                                                                                          <  2:3823137/136‑1                          AGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGT                                                                                                          <  2:3815943/136‑1                          AGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGT                                                                                                          <  2:2299979/136‑1                          AGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGT                                                                                                          <  1:703948/136‑1                            CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGG                                                                                                        >  2:3882604/1‑136                            CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGG                                                                                                        >  2:37438/1‑136                            CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGG                                                                                                        >  2:129067/1‑136                            CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGG                                                                                                        >  1:4093527/1‑136                                   GTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGAT                                                                                                 >  1:2478936/1‑136                                         GACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACACCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGA                                                                                           >  1:1429471/1‑136                                                 AGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGc                                                                                   >  1:1518668/1‑135                                                 AGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGA                                                                                   >  2:1223613/1‑136                                                    CACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCA                                                                                <  2:2688776/136‑1                                                    CACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCA                                                                                <  1:2867373/136‑1                                                    CACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCA                                                                                <  1:792699/136‑1                                                          CTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGG                                                                          <  1:2710396/136‑1                                                               G‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGT                                                                     >  1:1222715/1‑136                                                               G‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGT                                                                     >  1:918233/1‑136                                                                 AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTG                                                                    >  2:1811006/1‑136                                                                        TTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGG                                                             <  2:4093527/136‑1                                                                        TTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGG                                                             <  1:1258778/136‑1                                                                        TTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGG                                                             <  1:1223613/136‑1                                                                         TTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGC                                                            >  1:930604/1‑136                                                                           TAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCAC                                                          >  1:3802148/1‑136                                                                           TAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGC                                                                                                                   >  2:4636039/1‑79                                                                           TAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGC                                                                                                                   <  1:4636039/79‑1                                                                           TAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGAACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACAGACGGTTCGACCATCATGGTCGGTGGCTTCGGCAC                                                          >  2:2639641/1‑136                                                                             AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGG                                                        >  2:3898377/1‑136                                                                             AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGG                                                        >  1:998189/1‑136                                                                             AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGG                                                        >  1:294472/1‑136                                                                             AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGG                                                        >  1:1526404/1‑136                                                                             AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGG                                                        >  1:558483/1‑136                                                                                    TATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATATCCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCAT                                                 >  2:997662/1‑136                                                                                    TATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCAT                                                 >  2:115748/1‑136                                                                                    TATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCAT                                                 >  2:1729979/1‑136                                                                                    TATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCAT                                                 >  1:4590517/1‑136                                                                                            GAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCG                                         >  1:3620894/1‑136                                                                                              ACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGT                                                                                                          <  2:2957843/69‑1                                                                                              ACGAATGTCCTAATTTTTGCATTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGT                                                                                                          >  1:2957843/1‑69                                                                                                GAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGG                                                             <  2:7364/112‑1                                                                                                GAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGG                                                             >  1:7364/1‑112                                                                                                GAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGT                                                                                                          <  2:738523/67‑1                                                                                                GAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGT                                                                                                          >  1:738523/1‑67                                                                                                  ATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGA                                   >  2:4448228/1‑136                                                                                                  ATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGACTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGATCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGACCGAGCTGA                                   >  2:841504/1‑136                                                                                                   TGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGAT                                  <  2:964262/136‑1                                                                                                     TCCTAATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCG                                <  1:3668997/136‑1                                                                                                          ATTTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGC                           >  2:843476/1‑136                                                                                                            TTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCa                         >  1:2136264/1‑135                                                                                                            TTTTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCT                         <  2:2298996/136‑1                                                                                                              TTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCA                       <  1:1688262/136‑1                                                                                                              TTGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCA                       <  1:139108/136‑1                                                                                                               TGCCTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCAT                      >  2:4353536/1‑136                                                                                                                  CTTATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGC                   >  1:3997674/1‑136                                                                                                                     ATCTCGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCAC                <  2:2685843/136‑1                                                                                                                         CGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGT            <  2:4694587/136‑1                                                                                                                         CGGCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGT            <  2:998189/136‑1                                                                                                                           GCATAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGcca          <  1:375538/136‑4                                                                                                                              TAACCCCTAAACCGTACGAGTCCATCGCCAGCGCGGT                                                                                                          >  2:4152819/1‑37                                                                                                                              TAACCCCTAAACCGTACGAGTCCATCGCCAGCGCGGT                                                                                                          <  1:4152819/37‑1                                                                                                                              TAACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCG       >  1:273931/1‑136                                                                                                                               AACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGC      <  1:3983020/136‑1                                                                                                                               AACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGC      <  2:3654549/136‑1                                                                                                                                ACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCG     <  1:4015732/136‑1                                                                                                                                ACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCG     <  1:4353536/136‑1                                                                                                                                ACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCG     <  1:886950/136‑1                                                                                                                                ACCCCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGGCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCG     <  2:3391675/136‑1                                                                                                                                   CCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCGACC  >  2:3679690/1‑136                                                                                                                                   CCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCGACC  >  2:364906/1‑136                                                                                                                                   CCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCGACC  >  1:4631358/1‑136                                                                                                                                   CCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCGACC  <  2:896008/136‑1                                                                                                                                   CCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCGACC  >  1:1109254/1‑136                                                                                                                                   CCTAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCGACC  <  2:1222715/136‑1                                                                                                                                                                                                                                                                            GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCG‑AATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3368648‑3368518 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAAACGTACGAGTCCATCGCCAGCGCGGTGGAAGGGATTACCGACGGTTCGACCATCATGGTCGGTGGCTTCGGCACGGCTGGCATGCCGTCCGAGCTGATCGATGGCCTCATTGCCACCGGTGCCCGCGACC  >  NC_002947/4459337‑4459470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.