New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1 =0 (0.000)115 (0.630) 50/264 0.6 100% intergenic (–/+146) –/parB –/chromosome‑partitioning protein
?NC_002947 = 6183851 0 (0.000)intergenic (‑3/–) atpI/– ATP synthase protein I/–

Only 100 of 115 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGATTTCCGACTTCACGCTACAA  >  NC_002947/1‑135
                                                                                                                                       |                                                                                                                                      
atatccactgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcaca                                                                                                                                        <  1:4346076‑M1/1‑1 (MQ=255)
 tatccactgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacaa                                                                                                                                       >  1:318109‑M1/135‑136 (MQ=255)
  atccactgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAAc                                                                                                                                      >  2:4708463‑M1/134‑136 (MQ=255)
  atccactgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAAc                                                                                                                                      >  2:3976674‑M1/134‑136 (MQ=255)
       ctgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGctc                                                                                                                                 <  2:1020985‑M1/8‑1 (MQ=255)
       ctgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGctc                                                                                                                                 <  2:790607‑M1/8‑1 (MQ=255)
       ctgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGctc                                                                                                                                 <  2:4056443‑M1/8‑1 (MQ=255)
       ctgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGctc                                                                                                                                 <  2:3428755‑M1/8‑1 (MQ=255)
       ctgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGctc                                                                                                                                 <  1:4146513‑M1/8‑1 (MQ=255)
       ctgaccgaccctttccactgccacaacaccaagattgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGctc                                                                                                                                 <  2:4353696‑M1/8‑1 (MQ=255)
         gaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGctcct                                                                                                                               <  1:2890015‑M1/10‑1 (MQ=255)
            cgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCgg                                                                                                                            <  2:448911‑M1/13‑1 (MQ=255)
            cgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCgg                                                                                                                            <  1:1919581‑M1/13‑1 (MQ=255)
            cgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCgg                                                                                                                            <  1:3473010‑M1/13‑1 (MQ=255)
            cgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCgg                                                                                                                            <  2:1033342‑M1/13‑1 (MQ=255)
                 ctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTc                                                                                                                       <  2:3537288‑M1/18‑1 (MQ=255)
                 ctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTc                                                                                                                       <  2:3776351‑M1/18‑1 (MQ=255)
                  tttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCg                                                                                                                      <  2:1819872‑M1/19‑1 (MQ=255)
                    tccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGAc                                                                                                                    >  2:2877124‑M1/116‑136 (MQ=255)
                       actgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACcaa                                                                                                                 <  1:4354990‑M1/24‑1 (MQ=255)
                       actgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACcaa                                                                                                                 <  2:3115241‑M1/24‑1 (MQ=255)
                       actgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACcaa                                                                                                                 <  2:3644803‑M1/24‑1 (MQ=255)
                        ctgccacaactccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACcaac                                                                                                                >  2:1107960‑M1/112‑136 (MQ=255)
                        ctgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACcaac                                                                                                                >  1:750117‑M1/112‑136 (MQ=255)
                         tgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACcaaca                                                                                                               >  2:129583‑M1/111‑136 (MQ=255)
                         tgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACcaaca                                                                                                               >  1:1652305‑M1/111‑136 (MQ=255)
                           ccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAg                                                                                                             <  1:3481170‑M1/28‑1 (MQ=255)
                            cacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGt                                                                                                            <  2:1734974‑M1/29‑1 (MQ=255)
                             acaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTc                                                                                                           <  1:1920607‑M1/30‑1 (MQ=255)
                               aacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAg                                                                                                         >  1:3732679‑M1/105‑136 (MQ=255)
                                 caccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCt                                                                                                       <  2:3767938‑M1/34‑1 (MQ=255)
                                 caccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCt                                                                                                       <  1:1113375‑M1/34‑1 (MQ=255)
                                   ccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTAt                                                                                                     >  1:303806‑M1/101‑136 (MQ=255)
                                        gttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACtt                                                                                                <  2:1567069‑M1/41‑1 (MQ=255)
                                         ttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGActtc                                                                                               >  1:4637099‑M1/95‑135 (MQ=255)
                                                    agtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTtgt                                                                                    <  2:16098‑M1/53‑1 (MQ=255)
                                                           caaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACa                                                                             <  2:2157050‑M1/60‑1 (MQ=255)
                                                                tgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATg                                                                        >  2:2174524‑M1/72‑136 (MQ=255)
                                                                tgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATg                                                                        >  2:1612365‑M1/72‑136 (MQ=255)
                                                                tgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGACGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATg                                                                        >  1:4056443‑M1/72‑136 (MQ=255)
                                                                 gagccagcagtacctgaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  1:2116659‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggtaaggcaggcggtttgtcgtgcgtatttccttcacAAGTGCTCCTCGGAAGTCGACCAACAAGTGAGCTTTGACTTGGCATATTATGTTCCGACAAAATgc                                                                       >  1:1168834‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAGCTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  2:3630428‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTTGCATAATTTGTGCCGACAAAATgc                                                                       >  1:3767938‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  1:4318265‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  2:2907496‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  1:3019478‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  1:3115241‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  1:3296204‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  2:3096498‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  1:709377‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  1:608702‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  1:448911‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  2:3120096‑M1/71‑136 (MQ=255)
                                                                 gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  2:3246338‑M1/71‑136 (MQ=255)
                                                                 gagccagcaataccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  1:1337703‑M1/71‑136 (MQ=255)
                                                                  agccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcg                                                                      >  1:790607‑M1/70‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCATCAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  1:4388292‑M1/69‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  2:2502406‑M1/69‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  1:1091129‑M1/69‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  2:2601430‑M1/69‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  2:3473010‑M1/69‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  2:3481170‑M1/69‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  2:4235449‑M1/69‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  1:1567069‑M1/69‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  1:2045738‑M1/69‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  1:3605260‑M1/69‑136 (MQ=255)
                                                                   gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc                                                                     >  1:1526871‑M1/69‑136 (MQ=255)
                                                                    ccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgcg                                                                    >  1:3428755‑M1/68‑136 (MQ=255)
                                                                        cagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCaga                                                                >  2:4146513‑M1/64‑136 (MQ=255)
                                                                         agtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGTAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCagag                                                               >  1:1579599‑M1/63‑136 (MQ=255)
                                                                         agtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCagag                                                               >  1:1094191‑M1/63‑136 (MQ=255)
                                                                             ccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGTCATAATTTGTGCCGACAAAATGCGCGCAGAGtata                                                           >  2:4124564‑M1/59‑136 (MQ=255)
                                                                             ccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGtata                                                           >  2:4346076‑M1/59‑136 (MQ=255)
                                                                             ccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGtata                                                           >  1:2157050‑M1/59‑136 (MQ=255)
                                                                             ccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGtata                                                           >  1:1033342‑M1/59‑136 (MQ=255)
                                                                              cggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAg                                                          >  2:1634731‑M1/58‑136 (MQ=255)
                                                                                gaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAggg                                                        <  2:3400686‑M1/81‑1 (MQ=255)
                                                                                    aaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACGAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTgg                                                    >  1:4359097‑M1/52‑136 (MQ=255)
                                                                                       cgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGAtt                                                 >  1:1814820‑M1/49‑136 (MQ=255)
                                                                                       cgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGAtt                                                 >  1:16098‑M1/49‑136 (MQ=255)
                                                                                        gcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGTAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTa                                                <  2:1818987‑M1/89‑1 (MQ=255)
                                                                                        gcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTa                                                <  2:2428927‑M1/89‑1 (MQ=255)
                                                                                        gcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTa                                                <  2:2452491‑M1/89‑1 (MQ=255)
                                                                                        gcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTa                                                <  1:3761990‑M1/89‑1 (MQ=255)
                                                                                        gcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTa                                                <  2:470673‑M1/89‑1 (MQ=255)
                                                                                         cccagcgatggataggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTaa                                               >  1:1437205‑M1/47‑136 (MQ=255)
                                                                                           cagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  2:4017177‑M1/45‑110 (MQ=255)
                                                                                           cagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       <  1:4017177‑M1/66‑1 (MQ=255)
                                                                                              cgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTATCCCCt                                          <  2:1643542‑M1/95‑1 (MQ=255)
                                                                                                      aggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAAct                                  >  2:3968842‑M1/34‑136 (MQ=255)
                                                                                                      aggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAAct                                  >  1:3198935‑M1/34‑136 (MQ=255)
                                                                                                      aggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAAct                                  >  1:4549007‑M1/34‑136 (MQ=255)
                                                                                                           ggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAgg                                                         <  1:1561617‑M1/80‑1 (MQ=255)
                                                                                                              ggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTa                          <  2:3462228‑M1/111‑1 (MQ=255)
                                                                                                                    gcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGAtt                    >  2:4354990‑M1/20‑136 (MQ=255)
                                                                                                                            atttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc                                                                       >  1:3992849‑M1/12‑77 (MQ=255)
                                                                                                                               tccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGATTTCCGACTTCAc         >  1:2036432‑M1/9‑136 (MQ=255)
                                                                                                                                 catcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGATTTCCGACTTCACGc       <  2:238015‑M1/130‑1 (MQ=255)
                                                                                                                                      cAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGATTTCCGACTTCACGCTACaa  <  2:4218782‑M1/135‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                      
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGATTTCCGACTTCACGCTACAA  >  NC_002947/1‑135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.