BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 652785	175 (0.960)	49 (0.320)	19/224	1.9	39.8%	coding (1961/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
*	?	NC_002947	= 4810126	0 (0.000)	49 (0.320)	19/224	1.9	39.8%	intergenic (‑268/‑287)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2

Only 100 of 263 total aligned reads displayed.

AAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGGTCACGA  >  NC_002947/652650‑652919

aaaaaCAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTC                                                                                                                                        >  2:1656600‑M1/1‑136 (MQ=255)

aaaaaCAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTC                                                                                                                                        >  1:2243337‑M1/1‑136 (MQ=255)

     cAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGAcc                                                                                                                                   <  2:161213/136‑1 (MQ=255)

         cggcgCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGa                                                                                                                               >  2:3960203/1‑136 (MQ=255)

         cggcgCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGa                                                                                                                               >  2:4668254/1‑136 (MQ=255)

         cggcgCATGGCGGACTCGCGAGGTGGAACGAGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGAAGGAGCGGGATTACCCGCGAAGCGCCGCGCCGGCGGCGCTCGCACTCccacccaca                                                                                                                               >  1:2025466‑M1/1‑127 (MQ=255)

           gcgcATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTAGATCTCAGACCCTGAAc                                                                                                                             >  1:179100/1‑136 (MQ=255)

            cgcATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACg                                                                                                                            >  2:3190450/1‑136 (MQ=255)

               ttGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTTGGAGCGGGTTTACCCGCTAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTc                                                                                                                         <  2:3343546/135‑1 (MQ=255)

               aTGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTc                                                                                                                         <  1:3517529/136‑1 (MQ=255)

                gggCGGACTGGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAACCGTAGGCGCGGGTTTACCCGCTAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCg                                                                                                                        <  1:217076/135‑1 (MQ=255)

                    ggACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCAcc                                                                                                                    <  1:1260629/136‑1 (MQ=255)

                         cgcgAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGcccc                                                                                                               >  1:2422965/1‑135 (MQ=255)

                         cgcgAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCg                                                                                                               <  1:2598334/136‑1 (MQ=255)

                         cgcgAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCCGGCCGCGCTCGATCTGAGACCCAGAACCCTCGCACCGcccc                                                                                                               >  1:880306/1‑135 (MQ=37)

                               gTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAg                                                                                                         <  2:204333/136‑1 (MQ=255)

                               gTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAg                                                                                                         <  1:4116683/136‑1 (MQ=255)

                                tGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGc                                                                                                        >  1:3628567/1‑136 (MQ=255)

                                       tGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCCCCCGGTTCCGCTCACCGc                                                                                                 >  2:2459650/1‑136 (MQ=255)

                                       ggCCCGGCATGATACCTGATGCGCAGGAATAATTGGCCCGAAACACACGTCGGGGCGGGTTTCCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGc                                                                                                 <  2:2139477/135‑1 (MQ=37)

                                         cccGGCTTGAAAACGCAGCCGCAGCAATAATTGCCCCTAAACAACCGTCGGAGCGGGTTAACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGccc                                                                                               <  1:2796574/136‑1 (MQ=25)

                                           cGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGAcc                                                                                                                                   <  1:3378912/98‑1 (MQ=255)

                                           cGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAg                                                                                             >  2:4466887/1‑136 (MQ=255)

                                            ggCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGCTCTCAGACCCTGAACCCTCGCCCCCCCCGGTTCAGCTAACCCCCCacg                                                                                            >  1:1658992/1‑134 (MQ=25)

                                            ggCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAgg                                                                                            >  2:1561037/1‑136 (MQ=255)

                                              cATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCt                                                                                          <  1:3046512/136‑1 (MQ=255)

                                                tGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTca                                                                                        <  2:3825160/136‑1 (MQ=255)

                                                tGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTca                                                                                        <  1:1500171/136‑1 (MQ=255)

                                                tGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCAGAACGCTCGCCCCCCCCGGTTAAGCTAACCCCCCCGGcaca                                                                                        >  2:4482282/1‑136 (MQ=21)

                                                tGATAACGGAAGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCCGGCGGCGCAAGATGTCAGACCCGGAACCCACGCACCGCCCGGTTACGCTCACCGCCCAGGCTca                                                                                        >  1:19485/1‑136 (MQ=21)

                                                   tAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTcagca                                                                                     <  2:23489/136‑1 (MQ=255)

                                                      aaatcccgcaggaatAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaaacccccgg                                                                                  >  1:1209018‑M1/7‑82 (MQ=255)

                                                         aTGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTAAGACCCAGAACGCTCGCACCGCCCCGTTCAGCTCACCCCCCACGCTCagcagcgggt                                                                               >  2:3422412/1‑132 (MQ=25)

                                                          tgtgcATGAATAATTGGCCCTATACTCAATTAGGAGCGTGTTTAACCTCGAAGCGCCGCGCGTGCGGCGATCTATCTCAGACCCTGTACGCTCGCAGCTCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTc                                                                              <  2:1838318/133‑1 (MQ=255)

                                                          tGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTc                                                                              <  2:2907245/136‑1 (MQ=255)

                                                          tGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTc                                                                              <  1:4079917/136‑1 (MQ=255)

                                                          ggcgcAGTAAAAATTGGCCCTAAACAAACGTAGGAGCGGGTTAACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTc                                                                              <  1:2836076/135‑1 (MQ=255)

                                                          ggcgcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTc                                                                              <  2:2387785/135‑1 (MQ=255)

                                                          ggcgcAGGAATAATTGGCCCGAAACAAACGAAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTc                                                                              <  1:2058907/135‑1 (MQ=255)

                                                           gcgcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACCCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGttga                                                                             >  2:174784/1‑134 (MQ=255)

                                                           gcgcAGCAAAAATTGGCCCGAAACAACCGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCa                                                                             <  1:438948/136‑1 (MQ=255)

                                                              cAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTAAGCCCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGttgcccc                                                                          >  2:4187711/1‑131 (MQ=255)

                                                                 gAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCTCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGc                                                                                                 <  2:3003730/110‑1 (MQ=255)

                                                                 gAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCTCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGc                                                                                                 >  1:3003730/1‑110 (MQ=255)

                                                                   gggactggcccGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccaggcgctgaaactctcccggcgcacccctccccggcgctgaaaatcccccggcgaacaccgcccc                                                                     >  1:137783‑M1/6‑69 (MQ=255)

                                                                   ataatTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccagg                                                                                                                                   <  1:2706051‑M1/74‑6 (MQ=255)

                                                                   ataatTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccagg                                                                                                                                   >  1:900078‑M1/1‑69 (MQ=255)

                                                                   ataatTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccagg                                                                                                                                   >  1:520550‑M1/1‑69 (MQ=255)

                                                                   ataatTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccagg                                                                                                                                   <  2:900078‑M1/74‑6 (MQ=255)

                                                                   ataatTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccagg                                                                                                                                   >  2:2706051‑M1/1‑69 (MQ=255)

                                                                   ataatTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccagg                                                                                                                                   <  2:520550‑M1/74‑6 (MQ=255)

                                                                   ataatTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccagg                                                                                                                                   >  2:3623938‑M1/1‑69 (MQ=255)

                                                                   ataatTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCacagg                                                                                                                                   <  2:3700285‑M1/74‑6 (MQ=255)

                                                                      atTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACg                                                                  <  2:2847883/136‑1 (MQ=255)

                                                                      atTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACg                                                                  <  1:4466887/136‑1 (MQ=255)

                                                                      atTGCCCCTAAACAAACGTAGGAGCGGGTTTACCCGGTAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACg                                                                  <  1:2125531/136‑1 (MQ=255)

                                                                          gCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCGCGATCTCAGACCCTGCACGCACGCACCGCCCGGTTCACCTACCCGCCCAGGCTCAGCAGCTGTTAACCCTGTTTACGcccc                                                              >  2:876802/1‑136 (MQ=25)

                                                                              gAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCcccggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaa                                                          >  2:14901‑M1/1‑58 (MQ=255)

                                                                              gAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaa                                                          >  1:954746‑M1/1‑58 (MQ=255)

                                                                              gAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccaggcgcggaaactctccccgcgcacacctcccaggcgctgaaaaaccccccgcgaaacccgaccaggccctgcaaa                                                          >  1:4491252‑M1/1‑58 (MQ=255)

                                                                              gAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCCGCAGCTGTTCACCCTGTTTACGCCCCTCGc                                                          >  2:421478/1‑136 (MQ=255)

                                                                              gAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTc                                                                              >  2:4617914/1‑116 (MQ=255)

                                                                               aaacaaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGCTCTCccacgcgcggaaaaactcccggcgaaccccacccaggcccagaaaatcccccggcgaacaccccccacgcccggaaaac                                                         >  1:3785070‑M1/1‑57 (MQ=255)

                                                                               aaacaaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaac                                                         >  1:4578774‑M1/1‑57 (MQ=255)

                                                                               aaacaaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaac                                                         >  1:3675934‑M1/1‑57 (MQ=255)

                                                                                  caaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCGCGATCTCAGACCCAGAACCCTCGCCCCGCCCGGGTCAGCTCACCCCCCAGGCTCAGCAGCAGTTAACCCAGTTTACGCCCCACCCCaaa                                                      >  2:3406892/1‑135 (MQ=21)

                                                                                   aaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATg                                                     <  1:2368184/136‑1 (MQ=255)

                                                                                    aacGTAGGAGCGGGATTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATgc                                                    <  1:3194184/136‑1 (MQ=255)

                                                                                        tAGGAGCGGGTTTACCCGCGAAGCGCCGCGCCGGCCGCGCACGATCGCACCCCCTGAACGCTCCCCCCGCCCCGATCACCTCAACGCCCCGGCTACGCACCAGATCACCCTGAATACCCCCCTCCCCAATgcccag                                                >  1:991617/1‑132 (MQ=12)

                                                                                          ggAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCa                                              <  2:7578/136‑1 (MQ=255)

                                                                                             gCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacac                                           >  2:2223533‑M1/1‑43 (MQ=255)

                                                                                             gCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTGACCCTGGTTACGCCCCTCGCCAATGCGCTGCCGGt                                           >  1:3300767/1‑136 (MQ=255)

                                                                                              ggggTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGtt                                          <  2:2151231/135‑1 (MQ=255)

                                                                                                ggTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGt                                        <  1:1561037/136‑1 (MQ=255)

                                                                                                   ttACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCtt                                     <  1:3167743/136‑1 (MQ=255)

                                                                                                    tACCCGGGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGATCGCTCTCACCGCCCGGTTCAGCTCACCGCCCAGGCTGAGCAGCTGTTCACACTGTTTTCGCCCCTCGCCAATGCGCTGCAGGTTGTCTTc                                    <  2:3483482/136‑1 (MQ=39)

                                                                                                    tACCCGCTAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTc                                    <  1:4065802/136‑1 (MQ=255)

                                                                                                             aGCGCCGCGCGGGCGGCGCTCGATCTCccaggcgctgaaactctaccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgc                           >  1:2923805‑M1/1‑27 (MQ=255)

                                                                                                              gcgcCGCGCGGGCGGCGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcg                          >  1:1722581‑M1/1‑26 (MQ=255)

                                                                                                              gcgcCGCGCGGGCGGCGCTCGATCTAAGACCCGGAACGCTCGCACCGCCCGGGTCAGCTCACCGCCCAGGCTCAGCAGCTGGTCCCCCGGTTTACGCCCCGCGCCCATGCGGTGCAGGTTGTGTTGCCCCAGGTCg                          >  2:3058747/1‑136 (MQ=255)

                                                                                                                  cgcgcgGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGaa                      <  1:102022/136‑1 (MQ=255)

                                                                                                                   gcgcgGGCGGCGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacccctacccgccaaagcgcgaatta                     >  1:803600‑M1/1‑21 (MQ=255)

                                                                                                                    cgcgGGCGGCGCTCGATCTCAGGCCCTGGACCCACGCCCCGCCCGGTTCAGCTGACCGCCCAGGCGCAGCCGGTGTTGACCCTGTTTTCGCCCCTCGCCCATTCGCGGCCGGGTGGCTTACCCCAGTTCggggttg                    >  2:2257322/1‑130 (MQ=255)

                                                                                                                      cgggcggCGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgc                  <  1:499812‑M1/136‑119 (MQ=255)

                                                                                                                      cgggcggCGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgc                  <  1:2570220‑M1/136‑119 (MQ=255)

                                                                                                                      cgggcggCGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgc                  <  1:4361485‑M1/136‑119 (MQ=255)

                                                                                                                       gggcggCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCcgc                 <  2:333092/136‑1 (MQ=255)

                                                                                                                        ggcggcGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgccc                <  1:1101242‑M1/136‑121 (MQ=255)

                                                                                                                        ggcggcGCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgccc                <  2:2482844‑M1/136‑121 (MQ=255)

                                                                                                                         gcggcgCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCcgctc               <  2:3989841/136‑1 (MQ=255)

                                                                                                                         gcggcgCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCcgctc               <  1:3989998/136‑1 (MQ=255)

                                                                                                                         gcggcgCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCcgctc               <  1:3411453/136‑1 (MQ=255)

                                                                                                                           ggcgCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaactcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgccc                >  2:4046332‑M1/1‑13 (MQ=255)

                                                                                                                           ggcgCTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccatt             <  2:4405583‑M1/136‑124 (MQ=255)

                                                                                                                           ggcgCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCcgctcgc             <  1:3960203/136‑1 (MQ=255)

                                                                                                                            gcgcTCGATCTCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattg            <  2:117489‑M1/136‑125 (MQ=255)

                                                                                                                            gcgcTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCAGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCcgctcgcg            >  1:4624457/1‑135 (MQ=255)

                                                                                                                                tCGATCTCccaggctctgaaactctcccggggaacagctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaactcctacccgccaaagcgcgaattccgcccattgccct        <  2:4153050‑M1/136‑129 (MQ=255)

                                                                                                                                 cGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGGt       <  2:4366785/136‑1 (MQ=255)

                                                                                                                                 cGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGGt       <  2:934807/136‑1 (MQ=255)

AAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGGTCACGA  >  NC_002947/652650‑652919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.