BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2416434	115 (0.630)	26 (0.150)	6/258	4.1	16.2%	intergenic (+11/‑334)	PP_2114/PP_2115	transposase/hypothetical protein
*	?	NC_002947	4911750 =	156 (0.870)	26 (0.150)	6/258	4.1	16.2%	intergenic (+176/+303)	PP_4318/PP_4319	transposase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 115 total aligned reads displayed.

GCCCACGAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATT  >  NC_002947/2416311‑2416567

ccccACGACGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGGCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGaa                                                                                                                           <  1:3473915/135‑1 (MQ=12)

   cACGAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAACGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAgg                                                                                                                        >  2:854784/1‑136 (MQ=17)

    aCGAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGt                                                                                                                       <  1:3996075/136‑1 (MQ=32)

    aCGAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGt                                                                                                                       <  1:872600/136‑1 (MQ=32)

    aCGAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGt                                                                                                                       >  2:3705511/1‑136 (MQ=32)

            ccAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTgc                                                                                                               >  2:1661929/1‑136 (MQ=37)

              aaGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTgcgc                                                                                                             >  2:388420/1‑136 (MQ=39)

              aaGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTgcgc                                                                                                             <  1:400784/136‑1 (MQ=39)

              aaGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTgcgc                                                                                                             <  1:4433057/136‑1 (MQ=39)

              aaGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTgcgc                                                                                                             >  2:1823961/1‑136 (MQ=39)

              aaGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCAAGTTTCGACGGATCGGGTCATCAAAGCCACCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTgcgc                                                                                                             <  2:2289135/136‑1 (MQ=255)

                   gCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGGAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCt                                                                                                        <  1:766386/136‑1 (MQ=255)

                   gCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATAAAAGCCGCCAAAACCAAAAGACCTAGAAAGGGATCGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCt                                                                                                        >  2:3518316/1‑136 (MQ=255)

                     tCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGc                                                                                                      <  2:2691125/136‑1 (MQ=255)

                     tCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGc                                                                                                      <  2:3958173/136‑1 (MQ=255)

                      cAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCg                                                                                                     >  2:181213/1‑136 (MQ=255)

                      cAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCg                                                                                                     >  2:4460385/1‑136 (MQ=255)

                       aaaGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGt                                                                                                    >  1:148530/1‑136 (MQ=255)

                       aaaGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGt                                                                                                    >  1:2371887/1‑136 (MQ=255)

                       aaaGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGt                                                                                                    >  2:902052/1‑136 (MQ=255)

                       aaaGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGt                                                                                                    >  2:3899754/1‑136 (MQ=255)

                       aaaGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGt                                                                                                    >  2:1051650/1‑136 (MQ=255)

                       aaaGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGt                                                                                                    >  1:3584051/1‑136 (MQ=255)

                         aGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGtga                                                                                                  <  2:2900765/136‑1 (MQ=255)

                         aGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGtga                                                                                                  <  2:2873928/136‑1 (MQ=255)

                         aGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGtga                                                                                                  <  1:1301308/136‑1 (MQ=255)

                         aGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGtga                                                                                                  <  1:3479818/136‑1 (MQ=255)

                           cGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGtgaat                                                                                                <  1:2441362/136‑1 (MQ=255)

                           cGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGtgaat                                                                                                <  2:1026290/136‑1 (MQ=255)

                            gAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGtgaatg                                                                                               >  2:3972490/1‑136 (MQ=255)

                             aaGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGtgaatga                                                                                              <  1:3991504/136‑1 (MQ=255)

                             aaGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGtgaatga                                                                                              <  2:2698173/136‑1 (MQ=255)

                             aaGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGtgaatga                                                                                              <  1:388420/136‑1 (MQ=255)

                                 ccTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATAc                                                                                          <  2:4537329/136‑1 (MQ=255)

                                 ccTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATAc                                                                                          >  1:1338029/1‑136 (MQ=255)

                                 ccTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATAc                                                                                          >  1:4371361/1‑136 (MQ=255)

                                   ggggTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCt                                                                                        <  1:4321259/135‑1 (MQ=255)

                                       tGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTc                                                                                    <  1:1172280/136‑1 (MQ=255)

                                        gCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCg                                                                                   >  2:1136628/1‑136 (MQ=255)

                                        gCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCg                                                                                   >  2:2702223/1‑136 (MQ=255)

                                        gCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCg                                                                                   >  1:4298778/1‑136 (MQ=255)

                                           aGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGAtg                                                                                <  1:3895828/136‑1 (MQ=255)

                                           aGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGAtg                                                                                <  1:242998/136‑1 (MQ=255)

                                                cGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAAt                                                                           <  2:2371887/136‑1 (MQ=255)

                                                    tGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGAtg                                                                                <  1:459957/127‑1 (MQ=255)

                                                    tGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGccc                                                                       >  2:2713616/1‑136 (MQ=255)

                                                       aCATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCcaca                                                                    >  2:2330967/1‑136 (MQ=255)

                                                           gCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCt                                                                                        <  1:321171/112‑1 (MQ=255)

                                                           gCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCt                                                                                        >  2:321171/1‑112 (MQ=255)

                                                              cATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaaga                                                             >  2:2585872/1‑136 (MQ=255)

                                                              cATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaaga                                                             >  1:3996300/1‑136 (MQ=255)

                                                                tGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGATTGAATACCTACTCGATGTGAATGCCCACATCcaagaag                                                           >  1:3533246/1‑136 (MQ=255)

                                                                tGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaag                                                           >  1:1815460/1‑136 (MQ=255)

                                                                tGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaag                                                           >  1:2978786/1‑136 (MQ=255)

                                                                tGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaag                                                           <  1:1891267/136‑1 (MQ=255)

                                                                   ttCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGaaa                                                                                                                          <  2:4485506/70‑1 (MQ=35)

                                                                   ttCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGaaa                                                                                                                          >  1:4485506/1‑70 (MQ=35)

                                                                   ttCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaagcaa                                                        >  2:2151310/1‑136 (MQ=255)

                                                                   ttCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaagcaa                                                        >  1:1874413/1‑136 (MQ=255)

                                                                       aCGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaagcaagaag                                                    <  1:4203128/136‑1 (MQ=255)

                                                                          gATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaagcaagaagcaa                                                 >  1:1952399/1‑136 (MQ=255)

                                                                          gATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaagcaagaagcaa                                                 >  1:4011309/1‑136 (MQ=255)

                                                                              gggTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCt                                                                                        >  2:4555821/1‑93 (MQ=255)

                                                                              gggTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCt                                                                                        <  1:4555821/93‑1 (MQ=255)

                                                                              gggTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaagcaagaagcaagaag                                             >  1:2677775/1‑136 (MQ=255)

                                                                              gggTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaagcaagaagcaagaag                                             >  1:715244/1‑136 (MQ=255)

                                                                                      aaaGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCaagaagcaagaagcaagaagcaagaagc                                     <  1:1888095/136‑1 (MQ=255)

                                                                                      aaaGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCaagaagcaagaagcaagaagcaagaagc                                     <  1:3445512/136‑1 (MQ=255)

                                                                                       aaGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGAGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAagaagcaagaagcaagaagcaagaagca                                    >  1:3295080/1‑136 (MQ=255)

                                                                                        aGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAgaagcaagaagcaagaagcaagaagcaa                                   >  1:1237662/1‑136 (MQ=255)

                                                                                          ccgccAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAAt                                 >  1:2193424/1‑136 (MQ=255)

                                                                                           cgccAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAAtt                                <  1:2702223/136‑1 (MQ=255)

                                                                                           cgccAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAAtt                                <  2:2497090/136‑1 (MQ=255)

                                                                                            gccAAAACCAAAAGACCTTGAAAGTGATGGCCGTAAGTGCGGAAAGGGGACTGTGCGCCTCCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGATGCAAGAAGCAAGAAGCAAATTc                               <  2:1628679/136‑1 (MQ=18)

                                                                                             ccaaaaccaaaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCg                              >  2:4237572/1‑136 (MQ=255)

                                                                                             ccaaaaccaaaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCg                              >  2:64028/1‑136 (MQ=255)

                                                                                             ccaaaaccaaaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCg                              >  2:3555700/1‑136 (MQ=255)

                                                                                             ccaaaaccaaaaGACCTTGAAAGGGATGGCCGAAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAACAAGCAAGAAGCAAGAAGCAAGAATCAAATTcc                              >  2:550896/1‑135 (MQ=255)

                                                                                             ccaaaaccaaaaGACATTTAAAGGGATGGCCTTAAGGGCGGAAAGGTGAATGTCCGCCACCTGCGTGATTGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGAAAGAAGCATGAAGCAAATTCg                              >  2:3238045/1‑136 (MQ=18)

                                                                                                   ccaaaaGACCATGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCTCCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGtt                        <  2:3439887/136‑1 (MQ=255)

                                                                                                        aGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGAc                   <  1:1366379/136‑1 (MQ=255)

                                                                                                          aCCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTc                 >  1:2380102/1‑136 (MQ=255)

                                                                                                             ttGAAAGGGATTGCCGTAAGTGCTGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCTAGAAGCAAATTCGTCTGTTTTGACTCAGc              <  2:3295080/136‑1 (MQ=255)

                                                                                                             ttGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGc              <  2:777366/136‑1 (MQ=255)

                                                                                                             ttGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGc              <  1:2981060/136‑1 (MQ=255)

                                                                                                              tGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCg             <  2:2380102/136‑1 (MQ=255)

                                                                                                               gAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGa            >  2:798635/1‑136 (MQ=255)

                                                                                                                aaaGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGaa           >  2:2555573/1‑136 (MQ=255)

                                                                                                                 aaGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAAc          >  2:4435652/1‑136 (MQ=255)

                                                                                                                 aaGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAAc          >  1:3194532/1‑136 (MQ=255)

                                                                                                                 aaGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAAc          >  1:3727321/1‑136 (MQ=255)

                                                                                                                 aaGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAAc          >  1:923306/1‑136 (MQ=255)

                                                                                                                 aaGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAAc          >  2:3478241/1‑136 (MQ=255)

                                                                                                                        ggCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCAt   >  2:4181951/1‑136 (MQ=255)

                                                                                                                         gCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCAtt  <  2:3960038/136‑1 (MQ=255)

                                                                                                                         gCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCAtt  <  1:335002/136‑1 (MQ=255)

                                                                                                                         gCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCAtt  >  1:2101526/1‑136 (MQ=255)

                                                                                                                         gCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCAtt  >  2:1829813/1‑136 (MQ=255)

                                                                                                                         gCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCAtt  >  1:1648291/1‑136 (MQ=255)

                                                                                                                         gCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCAtt  <  2:2672130/136‑1 (MQ=255)

GCCCACGAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATT  >  NC_002947/2416311‑2416567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.