New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 287266974 (0.410)40 (0.220) 7/258 3.8 25.9% intergenic (+11/‑519) PP_2522/PP_2524 transposase/HD domain‑containing protein
?NC_002947 4911750 = 156 (0.870)intergenic (+176/+303) PP_4318/PP_4319 transposase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 160 total aligned reads displayed.

ATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCC  >  NC_002947/4911616‑4911883
                                                                                                                                      |                                                                                                                                     
aTCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCt                                                                                                                                      >  1:3548759/1‑136 (MQ=255)
aTCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCt                                                                                                                                      >  1:429460/1‑136 (MQ=255)
 tCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCtt                                                                                                                                     >  2:3284792/1‑136 (MQ=255)
  cGCAAACGGACGGGTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTa                                                                                                                                    <  1:2192734/136‑1 (MQ=255)
                tCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACttt                                                                                                                      <  2:888261/136‑1 (MQ=255)
                tCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACttt                                                                                                                      >  1:3974409/1‑136 (MQ=255)
                      tgTCAAAACAGACGAGTTCGCATCTTGCTTCTTTCTTCTTGCTTCTTGGATGTGTGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCa                                                                                                                <  2:3220657/135‑1 (MQ=255)
                            aaCAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAAcgcg                                                                                                          >  1:3434196/1‑136 (MQ=255)
                               aGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGTGCGCATAGTCACCTTTCCGACCTTACGGCGGGTCACTTTTTGTCAAACGCGACa                                                                                                       >  1:2986511/1‑136 (MQ=255)
                                 ccGAGTTCGCATCTTGCTTCTTGCATCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACaaa                                                                                                     <  2:3712575/135‑1 (MQ=255)
                                 aCGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCAC‑TTTTGTCAAACGCGACaaaa                                                                                                    <  1:3472802/136‑1 (MQ=255)
                                   gAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACaaaaa                                                                                                   >  1:1691873/1‑136 (MQ=255)
                                    aGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACaaaaat                                                                                                  >  1:407885/1‑135 (MQ=255)
                                    aGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAg                                                                                                  <  2:2760434/136‑1 (MQ=255)
                                    aGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAg                                                                                                  >  1:2572448/1‑136 (MQ=255)
                                    aGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAg                                                                                                  >  2:3178050/1‑136 (MQ=255)
                                         gCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAAcc                                                                                             >  1:2164671/1‑136 (MQ=255)
                                         gCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAAcc                                                                                             >  1:2526482/1‑136 (MQ=255)
                                          cttcttgcatcttgcttcttgctTCTTGGCTGTGGGCATTCACATCGCGTTGGTATTCATTCGCGCAGGGGGCGCTTAGTCACCTTTCCGCCCTTACGGCGGGTCTCTTTTTGTCAAACGCGACAAAAAGTAACCa                                                                                            <  2:1620198/134‑1 (MQ=11)
                                              ttgcttcttgcttcttgcttcTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCaaaaa                                                                                        <  1:1257974/136‑1 (MQ=40)
                                              ttgcttcttgcttcttgcttcTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCaaaaa                                                                                        <  2:1101304/136‑1 (MQ=40)
                                              ttgcttcttgcttcttgcttcTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCaaaaa                                                                                        <  1:1790126/136‑1 (MQ=40)
                                              ttgcttcttgcttcttgcttcTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCaaaaa                                                                                        <  2:227172/136‑1 (MQ=40)
                                                gcttcttgcttcttgcttcttGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAAc                                                                                      <  2:2526482/136‑1 (MQ=40)
                                                gcttcttgcttcttgcttcttGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAAc                                                                                      <  2:1115230/136‑1 (MQ=40)
                                                gcttcttgcttcttgcttcttGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAAc                                                                                      <  2:2432669/136‑1 (MQ=40)
                                                 cttcttgcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACg                                                                                     <  2:389959/136‑1 (MQ=40)
                                                  ttcttgcttcttgcttcttgGATGTGGGCTTTCACATCGCGTAGATATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGc                                                                                    <  1:2109103/136‑1 (MQ=255)
                                                  ttcttgcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGc                                                                                    <  2:12454/136‑1 (MQ=40)
                                                  ttcttgcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGc                                                                                    <  2:279359/136‑1 (MQ=40)
                                                  ttcttgcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGc                                                                                    <  1:3718320/136‑1 (MQ=40)
                                                  ttcttgcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGc                                                                                    <  2:899276/136‑1 (MQ=40)
                                                  ttcttgcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGc                                                                                    <  2:3300013/136‑1 (MQ=40)
                                                   tcttgcttcttgcttcttgGATGTGGGCATTCTCATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCt                                                                                   <  2:1821583/136‑1 (MQ=255)
                                                   tcttgcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCt                                                                                   >  1:2994962/1‑136 (MQ=40)
                                                   tcttgcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCt                                                                                   >  1:2780565/1‑136 (MQ=40)
                                                   tcttgcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCt                                                                                   <  1:3422173/136‑1 (MQ=255)
                                                      tgcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACC‑AAAAACGCTGGCt                                                                               <  1:155727/136‑1 (MQ=255)
                                                       gcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCt                                                                               <  1:352369/136‑1 (MQ=40)
                                                       gcttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCt                                                                               <  1:3997318/136‑1 (MQ=40)
                                                        cttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTc                                                                              >  1:3563181/1‑136 (MQ=40)
                                                         ttcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTcc                                                                             >  2:4678356/1‑136 (MQ=40)
                                                         ttcttgcttcatgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTcc                                                                             >  1:1965597/1‑136 (MQ=255)
                                                          tcttgcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCt                                                                            >  1:4479664/1‑136 (MQ=40)
                                                              gcttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTatca                                                                        <  1:260047/136‑1 (MQ=40)
                                                                ttcttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTatcatc                                                                      <  2:4080879/136‑1 (MQ=40)
                                                                   ttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCgg                                                                   <  2:3811938/136‑1 (MQ=40)
                                                                   ttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCgg                                                                   <  2:3548759/136‑1 (MQ=40)
                                                                   ttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCgg                                                                   <  1:1271556/136‑1 (MQ=40)
                                                                   ttgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCgg                                                                   <  2:1751780/136‑1 (MQ=40)
                                                                    tgGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGc                                                                  >  2:4264922/1‑136 (MQ=40)
                                                                          tgGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTgc                                                            <  1:3878895/136‑1 (MQ=40)
                                                                          tgGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTgc                                                            <  2:3389673/136‑1 (MQ=40)
                                                                          tgGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTgc                                                            <  2:2255333/136‑1 (MQ=40)
                                                                             gCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCAgcggg                                                         >  1:4199981/1‑134 (MQ=255)
                                                                             gCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCAgcgca                                                         >  2:4138237/1‑135 (MQ=255)
                                                                             gCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCAgccgg                                                         >  1:109268/1‑133 (MQ=255)
                                                                               aTTCACATCGCGTAGGTATTCATTCGTGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTAc                                                       <  2:302519/136‑1 (MQ=255)
                                                                               aTTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTAc                                                       >  2:4329906/1‑136 (MQ=40)
                                                                               aTTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCAGCGCTAc                                                       >  1:1108776/1‑136 (MQ=255)
                                                                                ttCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACg                                                      <  1:31496/136‑1 (MQ=40)
                                                                                   acaTCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTc                                                   >  1:1807141/1‑136 (MQ=40)
                                                                                      tCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCgg                                                <  1:284270/136‑1 (MQ=40)
                                                                                         cgTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGt                                             <  1:4249612/136‑1 (MQ=38)
                                                                                          gTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGtt                                            <  1:2359910/136‑1 (MQ=37)
                                                                                           tAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTc                                           <  2:2522329/136‑1 (MQ=37)
                                                                                            aGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTcc                                          <  1:3406499/136‑1 (MQ=37)
                                                                                            aGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCAGCGCTACGCGCCgggggtgc                                          >  2:3509619/1‑132 (MQ=255)
                                                                                               tATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTc                                       <  2:1807141/136‑1 (MQ=37)
                                                                                                tttcattcGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCg                                      <  2:752405/135‑1 (MQ=37)
                                                                                                cttcattcGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTTCGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCg                                      <  2:3587687/135‑1 (MQ=37)
                                                                                                attcattcGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCg                                      <  1:1881806/136‑1 (MQ=37)
                                                                                                attcattcGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCg                                      <  1:2434582/136‑1 (MQ=37)
                                                                                                attcattcGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCGGCGCTACGCTCCGGGGGTCCcgcg                                      >  2:3651569/1‑136 (MQ=255)
                                                                                                     ttcGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACg                                 <  2:320971/136‑1 (MQ=40)
                                                                                                       cgcgCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGt                               <  1:39020/136‑1 (MQ=40)
                                                                                                           cAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCGGCGCGACGCGCCGGGGGTGCCTCGCGACggggatt                           >  2:3783019/1‑131 (MQ=11)
                                                                                                            cgggggCGCATAGTCAGCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGc                          <  1:793600/135‑1 (MQ=255)
                                                                                                            aGGGGGCTCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGc                          <  1:781280/136‑1 (MQ=255)
                                                                                                            aGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTgcg                                                           >  2:4468630/1‑103 (MQ=35)
                                                                                                            aGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGc                          <  1:1715706/136‑1 (MQ=40)
                                                                                                                      tAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGt                <  2:2175861/136‑1 (MQ=38)
                                                                                                                      tAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGt                <  2:3563181/136‑1 (MQ=38)
                                                                                                                      tAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGt                <  1:4420841/136‑1 (MQ=38)
                                                                                                                      tAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGt                <  2:2957416/136‑1 (MQ=38)
                                                                                                                      tAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGt                <  2:3107029/136‑1 (MQ=38)
                                                                                                                           aCCTTTGCGCCCTTTCGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCGTGCGCTACGCTCCGGGGTTCCCTCGCTTCGGTCTTGCTCCCGGGAGTAcgcg           <  1:2968163/136‑1 (MQ=255)
                                                                                                                           aCCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGTAGTAcgcg           <  1:2070511/136‑1 (MQ=255)
                                                                                                                            ccTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACgcgc          <  2:3974409/136‑1 (MQ=38)
                                                                                                                             cTTTCCGCCCTTACGGCGGGGCACTTTTTGTCAACCGCGACAAAAAGTAACCAAAACACGCTGGCTCCTATCATCCGGCCCCGGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCt         <  2:4713380/136‑1 (MQ=255)
                                                                                                                                ttcGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCa      <  2:361364/134‑1 (MQ=18)
                                                                                                                                tCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCa      <  1:1534558/136‑1 (MQ=34)
                                                                                                                                tCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCa      <  1:317492/136‑1 (MQ=34)
                                                                                                                                 ccGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAg     <  1:3897576/136‑1 (MQ=33)
                                                                                                                                 ccGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAg     <  2:1569199/136‑1 (MQ=33)
                                                                                                                                 ccGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAg     <  1:3214876/136‑1 (MQ=33)
                                                                                                                                 ccGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAg     <  1:1632277/136‑1 (MQ=33)
                                                                                                                                  cGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAgg    <  2:4204384/136‑1 (MQ=33)
                                                                                                                                   gCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGc   <  2:1774013/136‑1 (MQ=32)
                                                                                                                                    cccTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGcc  <  1:3651569/136‑1 (MQ=32)
                                                                                                                                      |                                                                                                                                     
ATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGCGTAGGTATTCATTCGCGCAGGGGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCC  >  NC_002947/4911616‑4911883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.