BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_002947	3,827,335	Δ51 bp	coding (626‑676/1020 nt)	ptxS ←	2‑ketogluconate utilization repressor

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3827335	3827385	51	191 [0]	[0] 190	ptxS	2‑ketogluconate utilization repressor

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3827334	0 (0.000)	174 (1.010)	72/250	0.2	100%	coding (677/1020 nt)	ptxS	2‑ketogluconate utilization repressor
*	?	NC_002947	3827386 =	0 (0.000)	174 (1.010)	72/250	0.2	100%	coding (625/1020 nt)	ptxS	2‑ketogluconate utilization repressor

Only 100 of 190 total aligned reads displayed.

GCCGTTGAAGGTGAAGATGGCTTGCGGACCATGACCACTGTGGGCAAGAAACGAAGCCAGTTGGCCCTGCAGCCCGGCGCCGATTTCCAGTACCTGCTGACGCATGCCTGGCCGTCGGCTGATCGACGCGCCGAATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGACAAGGT  >  NC_002947/3827252‑3827520

caggttgcgcccggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaAt                                                                                                                                       <  2:3044688‑M2/2‑1 (MQ=255)

    ttgcgcccggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCt                                                                                                                                   <  2:3310589‑M2/6‑1 (MQ=255)

      gcgcccggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGc                                                                                                                                 <  2:2517692‑M2/8‑1 (MQ=255)

      gcgcccggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGc                                                                                                                                 <  2:2173060‑M2/8‑1 (MQ=255)

      gcgcccggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGc                                                                                                                                 <  2:1189012‑M2/8‑1 (MQ=255)

      ccgcccggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggggaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGc                                                                                                                                 <  2:4067353‑M2/8‑1 (MQ=255)

           cggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCg                                                                                                                            <  2:2875322‑M2/13‑1 (MQ=255)

           cggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCg                                                                                                                            <  1:2745642‑M2/13‑1 (MQ=255)

           cggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCg                                                                                                                            <  1:2381647‑M2/13‑1 (MQ=255)

                tcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCa                                                                                                                       <  2:3509064‑M2/18‑1 (MQ=255)

                tcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCa                                                                                                                       >  1:3718687‑M2/119‑136 (MQ=255)

                      agcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTg                                                                                                                 >  2:1547766‑M2/113‑136 (MQ=255)

                         gcccgggtgtccgccaaggtggcaacgccgttgaaggtgaagagggcttgcggaccatgaccactgtgggcaagaaacgaagcctgttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAAc                                                                                                              <  2:267478‑M2/27‑1 (MQ=255)

                           ccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTg                                                                                                            <  1:1001442‑M2/29‑1 (MQ=255)

                           ccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTg                                                                                                            <  2:2111439‑M2/29‑1 (MQ=255)

                           ccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTg                                                                                                            <  1:1491932‑M2/29‑1 (MQ=255)

                             gggtgaccgccaaggtggcgacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGt                                                                                                          >  2:4611093‑M2/106‑136 (MQ=255)

                             gggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGt                                                                                                          >  1:1913826‑M2/106‑136 (MQ=255)

                                tgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccagcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGcc                                                                                                       <  1:4330562‑M2/34‑1 (MQ=255)

                                     gccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagtccggcgccgaATGCCTGCACCCGCTCCAg                                                                                                                      <  1:201144‑M2/19‑1 (MQ=255)

                                        aaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAggg                                                                                               <  1:1583182‑M2/42‑1 (MQ=255)

                                          ggtgtcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGt                                                                                             <  1:2500667‑M2/44‑1 (MQ=255)

                                            tggcaacgcggttgtaggtgaatatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTc                                                                                           <  1:98227‑M2/46‑1 (MQ=255)

                                            tggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTc                                                                                           <  2:2938927‑M2/46‑1 (MQ=255)

                                               caacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCt                                                                                        <  1:3892033‑M2/49‑1 (MQ=255)

                                                atcgccgttgaaggggaagttgggttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTg                                                                                       <  1:657156‑M2/50‑1 (MQ=255)

                                                 acgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGa                                                                                      >  2:2885413‑M2/86‑136 (MQ=255)

                                                  cgccgttgaaggtgaagatggcttgcggaccattaccactgtgggcaataaacgatgccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTTAACTGGTGCCATCGAGGGGTTCGCTGAc                                                                                     <  2:539082‑M2/52‑1 (MQ=255)

                                                       ttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCa                                                                                >  2:3531806‑M2/80‑136 (MQ=255)

                                                        tgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAg                                                                               >  1:397403‑M2/79‑136 (MQ=255)

                                                        tgaaggtgaagatggcttgcggaccatgaccactgtggacaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAg                                                                               >  1:713209‑M2/79‑136 (MQ=255)

                                                          aaggtgaagatggcttgtggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGa                                                                             <  2:1833200‑M2/60‑1 (MQ=255)

                                                          aaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGa                                                                             <  2:3471357‑M2/60‑1 (MQ=255)

                                                          aaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGa                                                                             <  2:3955677‑M2/60‑1 (MQ=255)

                                                              tgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTc                                                                         <  1:166946‑M2/64‑1 (MQ=255)

                                                               taagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTcg                                                                        <  1:3839677‑M2/65‑1 (MQ=255)

                                                               gaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTcg                                                                        >  2:1541560‑M2/72‑136 (MQ=255)

                                                               gaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTcg                                                                        <  1:153398‑M2/65‑1 (MQ=255)

                                                               gaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTcg                                                                        <  1:2718752‑M2/65‑1 (MQ=255)

                                                                aagctggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTcgc                                                                       <  1:4638774‑M2/66‑1 (MQ=255)

                                                                aagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTcgc                                                                       <  2:2530343‑M2/66‑1 (MQ=255)

                                                                  gatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCgg                                                                     >  1:2585809‑M2/69‑136 (MQ=255)

                                                                  gatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCgg                                                                     >  1:522516‑M2/69‑136 (MQ=255)

                                                                    tggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCGAGGATGTCGCGGTa                                                                   >  2:894301‑M2/67‑136 (MQ=255)

                                                                      gcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGc                                                                 <  2:3377449‑M2/72‑1 (MQ=255)

                                                                      gcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGc                                                                 <  2:4713913‑M2/72‑1 (MQ=255)

                                                                      gcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGc                                                                 <  1:2124790‑M2/72‑1 (MQ=255)

                                                                       tttgcgtactatgacgaatgtggtcaataaacgaagcgagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCGAGGCGTGAAGTGGTGCTATCGTGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGcc                                                                <  1:551541‑M2/73‑1 (MQ=255)

                                                                       cttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGcc                                                                <  1:2776031‑M2/73‑1 (MQ=255)

                                                                          gcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTg                                                             >  1:131152‑M2/61‑136 (MQ=255)

                                                                          gcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTg                                                             >  1:1916501‑M2/61‑136 (MQ=255)

                                                                              accatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCt                                                         <  2:3600482‑M2/80‑1 (MQ=255)

                                                                                catgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGCCCGCCAGGATGTCGCGGTAGCCCTGGGCTTg                                                       >  2:2271438‑M2/55‑136 (MQ=255)

                                                                                catgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTg                                                       >  2:550463‑M2/55‑136 (MQ=255)

                                                                                catgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTg                                                       <  1:3744427‑M2/82‑1 (MQ=255)

                                                                                 atgaccactgtggtcaagaaactaagccagttggcgctgcagcccggcgccgaATGCCTTCACCCGCTCCTGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGc                                                      <  2:3835782‑M2/83‑1 (MQ=255)

                                                                                 atgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGc                                                      <  2:874890‑M2/83‑1 (MQ=255)

                                                                                 atgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGc                                                      <  2:2827368‑M2/83‑1 (MQ=255)

                                                                                 atgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGc                                                      <  1:3017462‑M2/83‑1 (MQ=255)

                                                                                 atgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGc                                                      <  2:2635045‑M2/83‑1 (MQ=255)

                                                                                 atgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGc                                                      <  1:409311‑M2/83‑1 (MQ=255)

                                                                                   gacccctgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTCGTGCCATCGAGGGCTTCGCTGACCGCCAGGATGTCTCGGTAGCCCTGGGCTTGCAg                                                    >  1:2878171‑M2/52‑136 (MQ=255)

                                                                                   gaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAg                                                    >  2:1142456‑M2/52‑136 (MQ=255)

                                                                                       actgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAggtgg                                                >  1:871766‑M2/48‑136 (MQ=255)

                                                                                          gtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTcc                                             <  2:4120679‑M2/92‑1 (MQ=255)

                                                                                           tgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTc                                                                         >  1:2808461‑M2/44‑107 (MQ=255)

                                                                                           tgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGtccc                                            >  1:4521787‑M2/44‑135 (MQ=255)

                                                                                           tgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGtccc                                            >  1:1137751‑M2/44‑135 (MQ=255)

                                                                                            gggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAg                                           >  2:4298231‑M2/43‑136 (MQ=255)

                                                                                             ggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAgg                                          >  2:3698394‑M2/42‑136 (MQ=255)

                                                                                                aagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGcc                                       >  2:1678278‑M2/39‑136 (MQ=255)

                                                                                                     ccgacgccagtcggccctgcagcccggcgccgaATGCCTGGACCCGCTGCAGGCGTGATCTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTc                                  <  1:3800428‑M2/103‑1 (MQ=255)

                                                                                                     acgaagcctgttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTc                                  <  1:1101014‑M2/103‑1 (MQ=255)

                                                                                                     acgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTc                                  >  1:1775618‑M2/34‑136 (MQ=255)

                                                                                                     acgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTc                                  <  1:3475930‑M2/103‑1 (MQ=255)

                                                                                                        aagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGAc                               >  2:4145329‑M2/31‑136 (MQ=255)

                                                                                                          gccagttggccctgcagcccggcgccgaGTGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTg                             <  2:4213578‑M2/108‑1 (MQ=255)

                                                                                                          gccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGTACTGGTGGCATCGAGGGGTTCGCTGAGCGCCTGGTTGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTg                             <  1:4282979‑M2/108‑1 (MQ=255)

                                                                                                          gccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTg                             <  1:128064‑M2/108‑1 (MQ=255)

                                                                                                          gccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTg                             <  2:2326745‑M2/108‑1 (MQ=255)

                                                                                                          gccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTg                             >  2:2234713‑M2/29‑136 (MQ=255)

                                                                                                          gccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTg                             <  1:4294907‑M2/108‑1 (MQ=255)

                                                                                                               ttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCa                        <  2:2439233‑M2/113‑1 (MQ=255)

                                                                                                               ttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCa                        <  1:4611093‑M2/113‑1 (MQ=255)

                                                                                                               ttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCa                        <  2:3718687‑M2/113‑1 (MQ=255)

                                                                                                                    cctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCAtt                   <  2:234895‑M2/118‑1 (MQ=255)

                                                                                                                             cggcgccgaATGCCTGCACCCGCTCCAGGCGTGATCTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCGCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGcc          <  1:2844534‑M2/127‑1 (MQ=255)

                                                                                                                              ggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCg         >  1:2672698‑M2/9‑136 (MQ=255)

                                                                                                                               gcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGa        <  1:2615555‑M2/129‑1 (MQ=255)

                                                                                                                               gcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGa        <  1:2450751‑M2/129‑1 (MQ=255)

                                                                                                                               gcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGa        <  2:277760‑M2/129‑1 (MQ=255)

                                                                                                                               gcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGa        <  2:991057‑M2/129‑1 (MQ=255)

                                                                                                                               gcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGa        <  2:4440216‑M2/129‑1 (MQ=255)

                                                                                                                               gcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGa        <  1:457192‑M2/129‑1 (MQ=255)

                                                                                                                               gcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGa        <  2:358642‑M2/129‑1 (MQ=255)

                                                                                                                               gcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGa        <  2:3177856‑M2/129‑1 (MQ=255)

                                                                                                                                cgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTcgc                                                                       <  2:2346172‑M2/66‑1 (MQ=255)

                                                                                                                                cgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCa                        >  1:330878‑M2/7‑119 (MQ=255)

                                                                                                                                  ccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGTCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGACaa     <  2:2585809‑M2/132‑1 (MQ=255)

                                                                                                                                   cgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGACAAg    >  2:76218‑M2/4‑136 (MQ=255)

GCCGTTGAAGGTGAAGATGGCTTGCGGACCATGACCACTGTGGGCAAGAAACGAAGCCAGTTGGCCCTGCAGCCCGGCGCCGATTTCCAGTACCTGCTGACGCATGCCTGGCCGTCGGCTGATCGACGCGCCGAATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAGGCCGACAAGGT  >  NC_002947/3827252‑3827520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`