Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,160,437 | 0 | A | C | 59.0% | 11.8 / 45.2 | 103 | S161R (AGC→CGC) | PP_3661 | membrane protein |
Reads supporting (aligned to +/- strand): ref base A (19/20); new base C (32/24); total (55/48) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.31e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.75e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 108 total aligned reads displayed.
ACCAGTACCCTGCTGATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCTGGATACCATGGGCGCCGGGCTGCTGCT > NC_002947/4160302‑4160567 | aCCAGTACCCTGCTGATCGGCCTGGGGGGTGGCATGAAAGTTTTCAAGCTCGACCGCTATACCGCCTTGCTGACCGCCGCCGGCAGCTCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCACTGCGCa < 1:3846376/136‑1 (MQ=255) cAGTACCCTGCTGATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGTGCTGCGCAg‑c > 2:3943871/1‑136 (MQ=255) cAGTACCCTGCTGATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGcgccg‑c > 2:1020361/1‑136 (MQ=255) cAGTACCCTGCTGATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGCGCAg‑c > 1:954411/1‑136 (MQ=255) aaGTACCCGGCTGAGCGGCGTGGGGGGTGGAATCAATGTGTTCAAGCGCGACCGCGAAACCGCCTGGCTGCCCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCTAATCGGCGCTGCGCAg‑c < 2:2351381/135‑1 (MQ=255) tACCCTGCTGATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGCGGCGGCG‑CGcc > 1:2670087/1‑136 (MQ=255) cccTGCTGATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGGGGCGCCG‑cccccc > 2:1587071/1‑136 (MQ=255) tgctgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCCTGCTGGCATTCGAATCGGGGCGGCGGAC‑ccccccccc > 1:23450/1‑135 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGGGGGG‑CGccccccccaa > 1:2876918/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGGGCCG‑ccccccccccca > 1:1361701/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGGGCCG‑ccccccccccaa > 1:2557199/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGGGCCC‑CGccccccccaa > 1:3915852/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGCGGCG‑CGccccccccca > 1:4330262/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGCGCGG‑cccccccccccc > 1:4446926/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGCGGCGCAC‑ccccccccccaa > 1:1823031/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCTGCGCCG‑CGCCCCCCAGaa > 1:1796691/1‑136 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCTGCGCCC‑CGcccccccaaa > 2:3523703/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGCCCCG‑cccccccccaaa > 1:3103387/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATAGGCGGAGCGCcc‑cccccccccaaa > 1:4685683/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCAATCGAATCGGCGCGGCGGAC‑CGcccccccaaa > 1:3060416/1‑132 (MQ=255) tgATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGAGCTGGCATTCCAATCGGCGCAGCGACG‑CGgcccccccaa > 2:3027755/1‑132 (MQ=255) aTCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCCGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGGCGCCCCG‑cccccccccccaca > 1:1922618/1‑130 (MQ=255) aTCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGGGCCG‑CGCCCCCCCCaaaa > 2:3336178/1‑136 (MQ=255) aTCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGCGCGG‑CGgccccccccaca > 1:3575165/1‑130 (MQ=255) aTCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGCGCAC‑CGCCCCCCCCaaaa > 1:156609/1‑136 (MQ=255) aTCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGCGGCGGCG‑CGCCCCCCCCaaaa > 1:200441/1‑136 (MQ=255) ggCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGCGCCG‑CCCCCCCCCCaaaaaaa > 1:382472/1‑133 (MQ=255) ggCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGCAGCGCCG‑CGCCCCCCAGaaaaacc > 2:1021567/1‑133 (MQ=255) ggCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGCGCAG‑CGCCCCCCaaaaaaccc > 2:942789/1‑133 (MQ=255) ggCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCAGCGCAC‑CCCCCCCCCAaaaaacc > 2:2599722/1‑133 (MQ=255) ccTGAGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCCGCCCCGCCGCCCTGCTGGCATTCGAATCGGCGCGGCCACG‑CACCCCCCCCaaaaaacgc > 2:528415/1‑131 (MQ=255) gtggtgtgtCATTAATGTTTTCAAGCTCGCCGGCTAAACGGCGTTGCTGACCGCCGCGGGCAGCGCCTTCTGCGGCGCCGCCGCCGTGGTGGCTTTCGAATCGGGGCTGCGCTC‑CGCCCCCCATAAAAGCGCCATg < 2:2314840/136‑1 (MQ=255) gtggtgtggCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGGGCCG‑CGCCCCCCAGAAAAGCGCCaag > 2:4643363/1‑134 (MQ=255) gtggtgtggCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCAGCGCAG‑CGCCCCCCAAAAAAGCCCCagg > 2:4437544/1‑134 (MQ=255) ggtgtggCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGTGCGCCC‑CGCCCCCCCAAAAAACGcccaggg > 2:271530/1‑131 (MQ=255) ggtgtggCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGCGGCGCAG‑CCCCCCCCCAAAAAACCCCAAggg > 2:870095/1‑135 (MQ=255) ggtgtggCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGCGCAG‑CGCCCCCCCAAAAAACGCCATGGc > 2:4404687/1‑136 (MQ=255) gtggCATTAAAGTGTTCAACCCCGACCGCGAACCCGCCTTCCTCCCCGCCGCCGGCCGCGCCCTCTGCGGCGCCGCCGCCGTGCGGGCATTCGATCCGGCGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGt < 2:2235802/136‑1 (MQ=255) gtggCATGATTGTGTGCACGCGCGCCCGCCATCCCGCGTGGCGCCCCGCCGCGGCCCGCGCCTGCTGCGGCGCCGCCGCGGGGCTGGCATTCGACGGGGCGCGGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGt < 2:164876/136‑1 (MQ=255) gtggCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGACGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGt < 1:4678263/136‑1 (MQ=255) cATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGCGGGGCGC‑CCCCCCCCCAAAAAACGCCCAGGGAGTCggg > 1:4612958/1‑135 (MQ=255) cATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCAGGCCAG‑CGCCCCCCAAAAAAACGCCCTAGCAgggcgc > 1:1954996/1‑131 (MQ=255) cATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGAGCTGGCATTCGAATCGGCGCAGCGCAC‑CCCCCCCCCAAAAAGCCCCAAAGCACTCGGa > 2:2306609/1‑136 (MQ=255) cATGAAAGTGTTCAAGCTCGACAGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCTGCGTAG‑CGCCCCCCATAAAAGCGCCAAGGCAGtagca > 2:872071/1‑132 (MQ=255) attaaaGTGTCCACGCGCCCCCGCGATCCCGCTTTGCCCCCCGCCGCCGCCCGCGCCATCGGCGGCGCCCCCGCGGTGCTGCAATTCTAAGCGGCGGGGCGCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGaa < 2:1768025/133‑1 (MQ=255) aaGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGGGGCGCCGCCGCCCCCCA‑AAAAACGCCAAGGGAGTGGGGAggca > 2:293038/1‑133 (MQ=255) aaGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGCGCCG‑CGCCCCCCCAAAAAACGCCAAGGCAGGAGGGAGCgg > 2:1011738/1‑135 (MQ=255) aaGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGCGCCG‑CCCCCCCCCGAAAACCGCCAAGGCAGGCGGGAGCgg > 2:3468635/1‑135 (MQ=255) tgttttCACGCTCGACCGCTATACCGCTTGGCGGACCCGGCCCGGCAGCGCCTGCTGCGGCGCCGCCGCCGGGCTGTAATTCTAAGCGGCTCTGCGCTG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTa < 2:2720092/132‑1 (MQ=255) tgtgtTCAAGCTCTCCGGCTATCCCGCCTTGCTGACCGCCGCGGGCTGCGCCTGCTGCGGCGCCGCCGCGGTGCTGGAATTCTATGCGGCGCTGCCCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTa < 2:3783071/135‑1 (MQ=255) tgtgtTCAACCTCGCCGGCTATCCCGCCTTGCTGACCGCCGCCGCCTGCGCCTTGTGGGGCGCCGCGGCGGTGGTGGAATTCCAATCGGCGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTa < 2:3820433/135‑1 (MQ=255) tgtgcTCACGCGCGCCCGCGATCCCGCCTTGCCCCCCGCCGCCGGCCGCGCCCTCGGCGGCGCCGCCGGCGTGGTGTAATTCGACCCGGCGCGGCGCCC‑CCCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTa < 2:3327530/135‑1 (MQ=255) aGTTTTCAAGCTCTCCCGCTAAACCGCCTTGGTCACCCCCGCCGGCAGCGCCTTCGGGGGCGCCGCCGCCGTGCTGGCATTCTAATGGGCGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTa < 2:3583257/136‑1 (MQ=255) aGTGTTCACGCGCGACCGCGATACCGCCTTGCGGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAAGCGGCGGTGCGCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTa < 2:1720330/136‑1 (MQ=255) tCAAGCTCCCCCCCGATCCCGCTTTGCTGCCCCCCGCCGGCAGGGCCATGTGCGGCGCCGCCGCGGTGGTGTCATTCCAAGCGGCGCGGCGCCG‑CCCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCt < 2:2910334/136‑1 (MQ=255) aaGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGACTCGGCGCGGCGCCC‑CGCCCCCCCAAAAAGCGCCCAGGCCGTCGGCAGGGTAGttgggg > 2:3969755/1‑131 (MQ=255) aaGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGGGGCGCCG‑CGCCCCCCCCAAAAACCCCCAGGGACGCGGAAGCGGAggggggt > 1:2268517/1‑130 (MQ=255) aaGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGCGGGGCCG‑CGCCCCCCCCAAAAAACCCCAAGCAGGCGGAAGCGGAgtggtgg > 1:959430/1‑135 (MQ=255) aaGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGCGGGGCAG‑CGCCCCCCCAAAAAACGCCAAGGGAGGCGGGAGGGGAGTGgtgt > 1:2703704/1‑136 (MQ=255) aaGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGCGCCC‑CGCCCCCCCAAAAAACCCCAACGCAGAAGGAAGCGAAgaggcag > 1:1855537/1‑130 (MQ=255) aaGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGCGCCC‑CCCCCCCCCCAAAAACGCCCAGGCAGGCGGACGCCTAggtgggg > 1:1364019/1‑130 (MQ=255) gCTCGACCGCGATCCCGCCTTGCTGCCCGCCGCCGGCAGCGCCTTCGGCGGCGCCGCCGCCGTGCTGGCATTCGACTCGGAGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTc < 1:3943871/136‑1 (MQ=255) gcgATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGGGCGGCGCCG‑CGCCCCCCAAAAAAAAGCCCAGGCGCGCGGGAGCGTAGTGGTGTTggggggcgt > 2:3659428/1‑130 (MQ=255) gcgATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCGGCGCCG‑CGCCCCCCCAAAAAGCCCCCAGGCAATCGGAAGGGTATTGCTGGTCGGttactt > 2:3094289/1‑131 (MQ=255) tcccGCCTTGCTGCCCGCCCCCGGCAGCGCCATCGGCGGCGCCGCCGCCGTGCTGGCATTCTAAGCGGCGCTGCGCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCg < 2:4579434/134‑1 (MQ=255) tACCGCGTTGCTGACCGCCGCCGGCAGCGCCTTCTGCGGCGCCGCCGCGGTGCTGGATTTCGAATCGGCGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCg < 2:1697542/136‑1 (MQ=255) ccccgccgTGCCGCCCGCCGCCGGCCGCGCCCGCGGCGGCGCCGCCGCCGGTGTGCAATTCGACGCGGCGCGGCCCAC‑CCCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCg < 1:1712140/134‑1 (MQ=255) ccccGCGTTGCTGCCCGCCGCGGGCAGCGCCATCTGGGGCGCCGCCGCGGTGCGGGCATTCGAAGCGGCGCTGCGCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCg < 2:3766324/134‑1 (MQ=255) acccGCCTTGCTGCCCGCCCCCGGCAGCGCCAGCTGGGGCGCCGCCGCCGTGCTGGCATTCTACTCGGCGCGGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCg < 2:1023357/134‑1 (MQ=255) tGCTGACCGCCACCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCTGTGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCg < 1:2699281/128‑1 (MQ=255) tGCTGACCGCCACCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCTGTGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCg > 2:2699281/1‑128 (MQ=255) tGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCAGCGCCG‑CGCCCCCCCAAAAAGCCCCCAGGCAGTCGGAAGCGTAGTGGTGGTAGGGTCCGTGTCGATTTTACTTTa > 1:1838582/1‑136 (MQ=255) cgccgccgGCCGCGCCAGGGCCGGCGCGGCCGCCGGGCTTGCATAGGACGCGGCGCTCCCCCC‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCa < 1:2569172/136‑1 (MQ=255) cgccgccgGCAGCGCCTGCGGCGGCGCCGCCGCGGTGCTGGCATTCGAAGCGGCGCGGCGCCC‑CCCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCa < 1:4154252/136‑1 (MQ=255) ccgGCAGCGCCATCGGCGGCGCCGCCGCCGTGCTGGCATTCCACGCGGCCCTGCGCCG‑CCCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGc < 2:2164750/136‑1 (MQ=255) ccgGCAGCGCCAGCGGCGGCGCCGCCGCCGTGCTGGATTTCGACGCGGCGCTGCGCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGc < 2:3743973/136‑1 (MQ=255) gggggcgCCGCGGCGGTGCTGGCATTCGACGCGGCGCGTCGCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCggct < 2:4004587/133‑1 (MQ=255) gggggcgCCGCCGCGGGGCTGGAATGCTACGCGCCGCGGCGCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCggct < 2:3982240/133‑1 (MQ=255) ggcggggCCGCGGCGGGGGTGGCTTTCTATCCGGCGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCggct < 2:2546666/135‑1 (MQ=255) ggcggcgCCGCCGCCGTGCTGGCTTTCGAGGGGGCGCGGCGCAG‑CCCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCggct < 1:4626034/135‑1 (MQ=255) ggcggcgCCGCCGCCGTGCTGGCTTCCCCCGCGGCGCGGCCCCC‑CCCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCggct < 1:1236444/135‑1 (MQ=255) gggcgCCGCGGCGGTGGTGGCTTTCGAAGGGGCGCGGCGCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCggctgg < 1:1746202/135‑1 (MQ=255) gggcgCCGCCGGGGTGCTTGCCTTCGCCGCGGCCCGGCGCCC‑CCCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCggctgg < 1:1020361/135‑1 (MQ=255) gggcgCCGCCGCCGTGCTGGCATTCTTATCGGCGCGGCGGAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCggctgg < 2:3060416/135‑1 (MQ=255) gggcgCCGCCGCCGGGGTGGGATTCGAAGCGGCGCGGCGCAC‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCggctgg < 2:3854353/135‑1 (MQ=255) gccgacgccgcggGGCTGGAATTCTATGCGGCTCTGGTCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAATCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACACACTGGCGATCAATGCCggctggc < 2:2253383/131‑1 (MQ=255) cgccgccgcCGTGCTGTCTTCCGACCCGGCCCGGCGCCG‑CCCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGgctggctg < 2:4007259/136‑1 (MQ=255) gccgccgccGGGCTGGAATTCTATCGGGCGCGGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGc < 2:382472/136‑1 (MQ=255) cgccgccgTGCTGCTATTCGCCGCGGCGCGGCGCCC‑CCCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCAt < 1:3855071/136‑1 (MQ=255) ccgcggGGCTGGCATTCTAAGCGGCGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTACTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCt < 2:4330262/136‑1 (MQ=255) ccgccgTGCTGGCATTCTAATCGGCGCTGCGCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCt < 2:493199/136‑1 (MQ=255) ggccgGGGTGGCTTTCGATGCGGCGCTGCGCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCTg < 2:2400070/135‑1 (MQ=255) ccgTGCTGGCATTCGAATCGGCGCTGCGCAG‑CGCCCCCCATAAAAGCGCCCTGGCAGTCGGGAGCGTAGGGCGGTTAGGGTGCGTGTCGATGTTACTTTTCCCACAGGCGATCAAAGACCGCTGGCTGCagcaggg > 2:3123783/1‑130 (MQ=255) gAATCGGCGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCTGGATACCATGGGCGCCg < 2:2773664/136‑1 (MQ=255) caagcggcgcggcgCCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCTGGATACCATGGGCGCCg < 2:286844/132‑1 (MQ=255) aTCGGCGCTGCGCAG‑CGCCCCCCAAAAAATCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTTCCATGTAGATGTTACTTTAAACACTGGCGGTAAAATCCGGCTGGCTGCATCAGGGTACCAAGGGCGCCggg > 2:3517485/1‑136 (MQ=255) ggcgcggcgcCG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCTGGATACCATGGGCGCCGGgctg < 2:4239127/136‑1 (MQ=255) ggcgcggcgcAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCTGGATACCATGGGCGCCGGgctg < 2:801557/136‑1 (MQ=255) ggCGCTCCGGCG‑CCCCCCCCATAACAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCTGGATACCATGGGCGCCGGgctg < 1:248880/136‑1 (MQ=255) ggcgccg‑cgccCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCTGGATACCATGGGCGCCGGgctgctgct < 2:1724231/135‑1 (MQ=255) | ACCAGTACCCTGCTGATCGGCCTGTGGTGTGGCATGAAAGTGTTCAAGCTCGACCGCGATACCGCCTTGCTGACCGCCGCCGGCAGCGCCATCTGCGGCGCCGCCGCCGTGCTGGCATTCGAATCGGCGCTGCGCAG‑CGCCCCCCATAAAAGCGCCATGGCAGTCGGAAGCGTAGTGCTGTTCGGTACCTTGTCGATGTTCCTTTACCCACTGGCGATCAATGCCGGCTGGCTGCATCTGGATACCATGGGCGCCGGGCTGCTGCT > NC_002947/4160302‑4160567 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |